Cmc12g0327921 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0327921
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr12: 19011250 .. 19012050 (-)
RNA-Seq ExpressionCmc12g0327921
SyntenyCmc12g0327921
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGCTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATATTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTATCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCAATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGTATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAAAAGTTGAGGATATAAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGAAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACAGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAGGATTTTAAAAAATCTACGTCGGGATCAGTGTTCAATCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAAACTCTACAATAGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGTCAATTCTAAAGAACCTCATACGCACAAATGA

mRNA sequence

ATGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGCTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATATTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTATCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCAATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGTATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAAAAGTTGAGGATATAAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGAAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACAGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAGGATTTTAAAAAATCTACGTCGGGATCAGTGTTCAATCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAAACTCTACAATAGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGTCAATTCTAAAGAACCTCATACGCACAAATGA

Coding sequence (CDS)

ATGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGCTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATATTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTATCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCAATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGTATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAAAAGTTGAGGATATAAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGAAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACAGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAGGATTTTAAAAAATCTACGTCGGGATCAGTGTTCAATCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAAACTCTACAATAGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGTCAATTCTAAAGAACCTCATACGCACAAATGA

Protein sequence

MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPDICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVVNSKEPHTHK
Homology
BLAST of Cmc12g0327921 vs. NCBI nr
Match: KAA0063766.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRD KNKTLALSQATYIDK
Sbjct: 308 VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDPKNKTLALSQATYIDK 367

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVML TRPD
Sbjct: 368 MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLYTRPD 427

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
           ICYAVEIVSRYQSNP LDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 428 ICYAVEIVSRYQSNPRLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 487

Query: 181 FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
            KKSTSGSVFNLNGGAVVWRSIKQGCIANST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 488 SKKSTSGSVFNLNGGAVVWRSIKQGCIANSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 547

Query: 241 NMNLPITLYCDNSGAVVNSKEPHTHK 267
           NMNLPITLYCDNSGAVVNSKEP THK
Sbjct: 548 NMNLPITLYCDNSGAVVNSKEPRTHK 573

BLAST of Cmc12g0327921 vs. NCBI nr
Match: TYK05518.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRD KNKTLALSQATYIDK
Sbjct: 308 VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDPKNKTLALSQATYIDK 367

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVML TRPD
Sbjct: 368 MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLYTRPD 427

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
           ICYAVEIVSRYQSNP LDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 428 ICYAVEIVSRYQSNPRLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 487

Query: 181 FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
            KKSTSGSVFNLNGGAVVWRSIKQGCIANST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 488 SKKSTSGSVFNLNGGAVVWRSIKQGCIANSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 547

Query: 241 NMNLPITLYCDNSGAVVNSKEPHTHK 267
           NMNLPITLYCDNSGAVVNSKEP THK
Sbjct: 548 NMNLPITLYCDNSGAVVNSKEPRTHK 573

BLAST of Cmc12g0327921 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 507.7 bits (1306), Expect = 6.2e-140
Identity = 246/266 (92.48%), Postives = 258/266 (96.99%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 910  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK 969

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 970  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 1029

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKD
Sbjct: 1030 ICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKD 1089

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTSGSVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 1090 SRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 1149

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1150 NMNLPITLYCDNSGAVANSKEPRSHK 1175

BLAST of Cmc12g0327921 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 507.7 bits (1306), Expect = 6.2e-140
Identity = 246/266 (92.48%), Postives = 258/266 (96.99%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 784  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK 843

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 844  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 903

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKD
Sbjct: 904  ICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKD 963

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTSGSVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 964  SRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 1023

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1024 NMNLPITLYCDNSGAVANSKEPRSHK 1049

BLAST of Cmc12g0327921 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-139
Identity = 245/266 (92.11%), Postives = 256/266 (96.24%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGE QY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 910  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDK 969

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 970  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 1029

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 1030 ICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 1089

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTS SVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWL+KFLHDLEVVP
Sbjct: 1090 SRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVP 1149

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1150 NMNLPITLYCDNSGAVANSKEPRSHK 1175

BLAST of Cmc12g0327921 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-64
Identity = 122/265 (46.04%), Postives = 176/265 (66.42%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DD+L++G D G +   K  L+  F MKDLG AQ ILG++I+R+R ++ L LSQ  YI++
Sbjct: 1009 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1068

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +L R++M+N+K    P    + LSK+ CP T ++  ++ ++PY+SAVGSLMY M+CTRPD
Sbjct: 1069 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            I +AV +VSR+  NPG +HW AVK IL+YLR T    L +G  D IL GYT++D   D D
Sbjct: 1129 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDID 1188

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KS++G +F  +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL++FL +L +  
Sbjct: 1189 NRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL-- 1248

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTH 266
                   +YCD+  A+  SK    H
Sbjct: 1249 -HQKEYVVYCDSQSAIDLSKNSMYH 1270

BLAST of Cmc12g0327921 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 152.9 bits (385), Expect = 5.1e-36
Identity = 89/274 (32.48%), Postives = 150/274 (54.74%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DD+++   D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K
Sbjct: 1088 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKK 1147

Query: 61   MLVRYSMQNSKKGLLP----FRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLC 120
            +L +++M+N      P      Y +  S E C             P  S +G LMY+MLC
Sbjct: 1148 ILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLC 1207

Query: 121  TRPDICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG---AKDLILTGYTNS 180
            TRPD+  AV I+SRY S    + W  +K +L+YL+ T D  L++    A +  + GY +S
Sbjct: 1208 TRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDS 1267

Query: 181  DFQTDKDFKKSTSGSVFNL-NGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKF 240
            D+   +  +KST+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+  
Sbjct: 1268 DWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL 1327

Query: 241  LHDLEVVPNMNLPITLYCDNSGAVVNSKEPHTHK 267
            L  + +   +  PI +Y DN G +  +  P  HK
Sbjct: 1328 LTSINI--KLENPIKIYEDNQGCISIANNPSCHK 1346

BLAST of Cmc12g0327921 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 88/266 (33.08%), Postives = 128/266 (48.12%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDIL+ GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ  Y   
Sbjct: 1134 VDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLD 1193

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +L R +M  +K    P      L+     K P   E      Y   VGSL Y+   TRPD
Sbjct: 1194 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQYLAF-TRPD 1253

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTNSDFQTDK 180
            + YAV  +S+Y   P  DHW A+K +L+YL  T D+ + +     L L  Y+++D+  D 
Sbjct: 1254 LSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDT 1313

Query: 181  DFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVV 240
            D   ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L + 
Sbjct: 1314 DDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI- 1373

Query: 241  PNMNLPITLYCDNSGAVVNSKEPHTH 266
              ++ P  +YCDN GA      P  H
Sbjct: 1374 -QLSHPPVIYCDNVGATYLCANPVFH 1388

BLAST of Cmc12g0327921 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 62/133 (46.62%), Postives = 93/133 (69.92%), Query Frame = 0

Query: 98  IRRIPYASAVGSLMYVMLCTRPDICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYM 157
           ++ +PY SAVG++MY+M+ TRPD+  AV ++S++ S+P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 158 LVY-GAKDLILTGYTNSDFQTDKDFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEY 217
           L +  A    L GY+++D+  D + ++STSG +F LNGG V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 218 VAACEAAKEAVWL 230
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

BLAST of Cmc12g0327921 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 90/266 (33.83%), Postives = 127/266 (47.74%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDIL+ GND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ  YI  
Sbjct: 1151 VDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILD 1210

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +L R +M  +K    P      LS     K     E      Y   VGSL Y+   TRPD
Sbjct: 1211 LLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQYLAF-TRPD 1270

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTNSDFQTDK 180
            I YAV  +S++   P  +H  A+K IL+YL  T ++ + +     L L  Y+++D+  DK
Sbjct: 1271 ISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDK 1330

Query: 181  DFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVV 240
            D   ST+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L + 
Sbjct: 1331 DDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI- 1390

Query: 241  PNMNLPITLYCDNSGAVVNSKEPHTH 266
              +  P  +YCDN GA      P  H
Sbjct: 1391 -RLTRPPVIYCDNVGATYLCANPVFH 1405

BLAST of Cmc12g0327921 vs. ExPASy TrEMBL
Match: A0A5A7VBG2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00550 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRD KNKTLALSQATYIDK
Sbjct: 308 VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDPKNKTLALSQATYIDK 367

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVML TRPD
Sbjct: 368 MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLYTRPD 427

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
           ICYAVEIVSRYQSNP LDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 428 ICYAVEIVSRYQSNPRLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 487

Query: 181 FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
            KKSTSGSVFNLNGGAVVWRSIKQGCIANST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 488 SKKSTSGSVFNLNGGAVVWRSIKQGCIANSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 547

Query: 241 NMNLPITLYCDNSGAVVNSKEPHTHK 267
           NMNLPITLYCDNSGAVVNSKEP THK
Sbjct: 548 NMNLPITLYCDNSGAVVNSKEPRTHK 573

BLAST of Cmc12g0327921 vs. ExPASy TrEMBL
Match: A0A5D3C2T5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00180 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRD KNKTLALSQATYIDK
Sbjct: 308 VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDPKNKTLALSQATYIDK 367

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVML TRPD
Sbjct: 368 MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLYTRPD 427

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
           ICYAVEIVSRYQSNP LDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 428 ICYAVEIVSRYQSNPRLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 487

Query: 181 FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
            KKSTSGSVFNLNGGAVVWRSIKQGCIANST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 488 SKKSTSGSVFNLNGGAVVWRSIKQGCIANSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 547

Query: 241 NMNLPITLYCDNSGAVVNSKEPHTHK 267
           NMNLPITLYCDNSGAVVNSKEP THK
Sbjct: 548 NMNLPITLYCDNSGAVVNSKEPRTHK 573

BLAST of Cmc12g0327921 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.0e-140
Identity = 246/266 (92.48%), Postives = 258/266 (96.99%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 910  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK 969

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 970  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 1029

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKD
Sbjct: 1030 ICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKD 1089

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTSGSVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 1090 SRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 1149

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1150 NMNLPITLYCDNSGAVANSKEPRSHK 1175

BLAST of Cmc12g0327921 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.0e-140
Identity = 246/266 (92.48%), Postives = 258/266 (96.99%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGEAQY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 784  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK 843

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 844  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 903

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKD
Sbjct: 904  ICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKD 963

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTSGSVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWLRKFLHDLEVVP
Sbjct: 964  SRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVP 1023

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1024 NMNLPITLYCDNSGAVANSKEPRSHK 1049

BLAST of Cmc12g0327921 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.3e-139
Identity = 245/266 (92.11%), Postives = 256/266 (96.24%), Query Frame = 0

Query: 1    MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
            +DDILLIGNDVGYLTD KAWLAAQFQMKDLGE QY+LGIQIIRDRKNKTLALSQATYIDK
Sbjct: 910  VDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDK 969

Query: 61   MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
            +LVRYSMQNSKKGLLPFR+GVHLSKEQ PKTPQ+VED+RRIPYASAVGSLMY MLCTRPD
Sbjct: 970  LLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPD 1029

Query: 121  ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 180
            ICYAV IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD
Sbjct: 1030 ICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKD 1089

Query: 181  FKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVVP 240
             +KSTS SVF LNGGAVVWRSIKQGCIA+ST+EAEYVAACEAAKEAVWL+KFLHDLEVVP
Sbjct: 1090 SRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVP 1149

Query: 241  NMNLPITLYCDNSGAVVNSKEPHTHK 267
            NMNLPITLYCDNSGAV NSKEP +HK
Sbjct: 1150 NMNLPITLYCDNSGAVANSKEPRSHK 1175

BLAST of Cmc12g0327921 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26
Identity = 76/257 (29.57%), Postives = 133/257 (51.75%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDI++  N+   + + K+ L + F+++DLG  +Y LG++I R      + + Q  Y   
Sbjct: 284 VDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALD 343

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           +L    +   K   +P    V  S           + +    Y   +G LMY+ + TR D
Sbjct: 344 LLDETGLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLD 403

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK-DLILTGYTNSDFQTDK 180
           I +AV  +S++   P L H  AV  IL Y++ T    L Y ++ ++ L  ++++ FQ+ K
Sbjct: 404 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCK 463

Query: 181 DFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVWLRKFLHDLEVV 240
           D ++ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E +WL +F  +L++ 
Sbjct: 464 DTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL- 523

Query: 241 PNMNLPITLYCDNSGAV 257
             ++ P  L+CDN+ A+
Sbjct: 524 -PLSKPTLLFCDNTAAI 529

BLAST of Cmc12g0327921 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-19
Identity = 71/229 (31.00%), Postives = 109/229 (47.60%), Query Frame = 0

Query: 1   MDDILLIGNDVGYLTDAKAWLAAQFQMKDLGEAQYILGIQIIRDRKNKTLALSQATYIDK 60
           +DDILL G+    L      L++ F MKDLG   Y LGIQI        L LSQ  Y ++
Sbjct: 7   VDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQ 66

Query: 61  MLVRYSMQNSKKGLLPFRYGVHLSKEQCPKTPQKVEDIRRIPYASAVGSLMYVMLCTRPD 120
           +L    M + K    P    ++ S     K P   +      + S VG+L Y+ L TRPD
Sbjct: 67  ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSD------FRSIVGALQYLTL-TRPD 126

Query: 121 ICYAVEIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTNSDFQTDK 180
           I YAV IV +    P L  +  +K +L+Y++ T  + + ++    L +  + +SD+    
Sbjct: 127 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCT 186

Query: 181 DFKKSTSGSVFNLNGGAVVWRSIKQGCIANSTIEAEYVAACEAAKEAVW 229
             ++ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 187 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063766.12.4e-14496.62gag/pol protein [Cucumis melo var. makuwa][more]
TYK05518.12.4e-14496.62gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.16.2e-14092.48gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.16.2e-14092.48gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035907.16.8e-13992.11gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109782.0e-6446.04Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041465.1e-3632.48Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.6e-2933.08Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P0CV721.1e-2746.62Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
Q94HW21.5e-2733.83Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5A7VBG21.2e-14496.62Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G005... [more]
A0A5D3C2T51.2e-14496.62Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G0018... [more]
A0A5A7TZD03.0e-14092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE83.0e-14092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7T2V93.3e-13992.11Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
Match NameE-valueIdentityDescription
AT4G23160.11.3e-2629.57cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.17.5e-1931.00DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..76
e-value: 5.3E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 18..229
NoneNo IPR availablePANTHERPTHR11439:SF268ATP-DEPENDENT DNA HELICASEcoord: 18..229
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 168..266
e-value: 5.07823E-40
score: 133.748

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0327921.1Cmc12g0327921.1mRNA