Cmc12g0326851 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0326851
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	CMiso1.1chr12: 17609433 .. 17609909 (+)
RNA-Seq Expression	Cmc12g0326851
Synteny	Cmc12g0326851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTAATGCCACTTGTCAGTCTTTGTATGTTTCATCTACAATTGTCACTGGACTAGACTATTCATACATTTCTCTTCTAAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTACCGCACCAATGTCTACTTCTTTTGATCTTTATACAACTGCACCACCATTTAATGATCCATCACACTATCGCAGACTAGTTGGTTTCTTGCAATATCTTACCTTCACTCGTCCTGGTATTGTATTCTCCTTAAATCGTGTCAGTCAATTCATGCATAAACCAACTGTCATTCACTTTTCAGTCGTCAAACGTATCCTCAAATATCTTCGTGGTATCCAACCCTTGGAATAA

mRNA sequence

ATGGATACTAATGCCACTTGTCAGTCTTTGTATGTTTCATCTACAATTGTCACTGGACTAGACTATTCATACATTTCTCTTCTAAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTACCGCACCAATGTCTACTTCTTTTGATCTTTATACAACTGCACCACCATTTAATGATCCATCACACTATCGCAGACTAGTTGGTTTCTTGCAATATCTTACCTTCACTCGTCCTGGTATTGTATTCTCCTTAAATCGTGTCAGTCAATTCATGCATAAACCAACTGTCATTCACTTTTCAGTCGTCAAACGTATCCTCAAATATCTTCGTGGTATCCAACCCTTGGAATAA

Coding sequence (CDS)

ATGGATACTAATGCCACTTGTCAGTCTTTGTATGTTTCATCTACAATTGTCACTGGACTAGACTATTCATACATTTCTCTTCTAAAAAATCAATTGGCCCTAGAATTCAAAATATTTGATCTTGGTCCTTTGAAGTATTTTCTTGGTCTCAAAATCCAAACCTCCATTGAGGGCATATTTGTTAATCATGCCAAATTTCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTACCGCACCAATGTCTACTTCTTTTGATCTTTATACAACTGCACCACCATTTAATGATCCATCACACTATCGCAGACTAGTTGGTTTCTTGCAATATCTTACCTTCACTCGTCCTGGTATTGTATTCTCCTTAAATCGTGTCAGTCAATTCATGCATAAACCAACTGTCATTCACTTTTCAGTCGTCAAACGTATCCTCAAATATCTTCGTGGTATCCAACCCTTGGAATAA

Protein sequence

MDTNATCQSLYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLNDLLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRVSQFMHKPTVIHFSVVKRILKYLRGIQPLE

Homology

[Close]

BLAST of Cmc12g0326851 vs. NCBI nr
Match: XP_016901810.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 118/144 (81.94%), Postives = 126/144 (87.50%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVT  DY YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 119 LYVDDIIVTEPDYLYISVLKNQLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLND 178

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTS KSC  PMSTSFDLYT APPFNDPS YRRLVG LQYLTFTRP I FS+NRV
Sbjct: 179 LLHTSGMTSVKSCITPMSTSFDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRV 238

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
           SQFMHKPT+IHFS VKRIL+YLRG
Sbjct: 239 SQFMHKPTIIHFSAVKRILRYLRG 262

[Close]

BLAST of Cmc12g0326851 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 118/148 (79.73%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTGLDY YI +LKNQLALEFKI +LGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 341 LYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLND 400

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDP  YRRLVG LQYLTFTRP I  S+NRV
Sbjct: 401 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRV 460

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHFS VKRIL+YL G   L
Sbjct: 461 SQFMHKPTVIHFSAVKRILRYLCGTPTL 488

[Close]

BLAST of Cmc12g0326851 vs. NCBI nr
Match: TYK06402.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 118/148 (79.73%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTG DY YIS+ KNQLALEFKI DLGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 446 LYVDDIIVTGPDYLYISVFKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLND 505

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQ LTFTR  I FS+NRV
Sbjct: 506 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQCLTFTRSDIAFSVNRV 565

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHF  VKRIL+YLRG   L
Sbjct: 566 SQFMHKPTVIHFLAVKRILRYLRGTPTL 593

[Close]

BLAST of Cmc12g0326851 vs. NCBI nr
Match: KAA0050146.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 118/148 (79.73%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTG DY YIS+ KNQLALEFKI DLGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 504 LYVDDIIVTGPDYLYISVFKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLND 563

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQ LTFTR  I FS+NRV
Sbjct: 564 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQCLTFTRSDIAFSVNRV 623

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHF  VKRIL+YLRG   L
Sbjct: 624 SQFMHKPTVIHFLAVKRILRYLRGTPTL 651

[Close]

BLAST of Cmc12g0326851 vs. NCBI nr
Match: KAA0045445.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 5.1e-57
Identity = 117/144 (81.25%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           L +   IVT  DYSYIS+LKNQL LEFKI DLGPLKYFL L+IQ+SI+GIFVN AK+LND
Sbjct: 213 LALDDIIVTEPDYSYISVLKNQLDLEFKISDLGPLKYFLDLEIQSSIDGIFVNQAKYLND 272

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQYLTFTRPGI FS+NRV
Sbjct: 273 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPGIAFSINRV 332

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
           SQFMHKPTVIHFS VK IL+YLRG
Sbjct: 333 SQFMHKPTVIHFSAVKCILRYLRG 356

[Close]

BLAST of Cmc12g0326851 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.2e-26
Identity = 55/144 (38.19%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   ++TG   + +++L  QL+  F + DLGP+ YFLG++I+T   G+F++  K+   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           +L+ +GM   K  + P+    +   +   + DPS +R +VG LQYLT TRP I +++N V
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIV 124

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
            Q MH+PT+  F ++KR+L+Y++G
Sbjct: 125 CQRMHEPTLADFDLLKRVLRYVKG 148

[Close]

BLAST of Cmc12g0326851 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 58/146 (39.73%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 10   LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
            +YV   ++TG D + +    + L+  F + D   L YFLG++ +    G+ ++  +++ D
Sbjct: 1149 VYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILD 1208

Query: 70   LLHTSGMTSAKSCTAPMSTS--FDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLN 129
            LL  + M +AK  T PM+ S    LY +     DP+ YR +VG LQYL FTRP I +++N
Sbjct: 1209 LLARTNMITAKPVTTPMAPSPKLSLY-SGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVN 1268

Query: 130  RVSQFMHKPTVIHFSVVKRILKYLRG 154
            R+SQFMH PT  H   +KRIL+YL G
Sbjct: 1269 RLSQFMHMPTEEHLQALKRILRYLAG 1293

[Close]

BLAST of Cmc12g0326851 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-21
Identity = 53/145 (36.55%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 10   LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
            +YV   ++TG D   +    + L+  F + +   L YFLG++ +   +G+ ++  ++  D
Sbjct: 1132 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1191

Query: 70   LLHTSGMTSAKSCTAPMSTSFDL-YTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNR 129
            LL  + M +AK    PM+TS  L   +     DP+ YR +VG LQYL FTRP + +++NR
Sbjct: 1192 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1251

Query: 130  VSQFMHKPTVIHFSVVKRILKYLRG 154
            +SQ+MH PT  H++ +KR+L+YL G
Sbjct: 1252 LSQYMHMPTDDHWNALKRVLRYLAG 1276

[Close]

BLAST of Cmc12g0326851 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 8.2e-10
Identity = 37/147 (25.17%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 10   LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
            LYV   ++   D + ++  K  L  +F++ DL  +K+F+G++I+   + I+++ + ++  
Sbjct: 1086 LYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKK 1145

Query: 70   LLHTSGMTSAKSCTAPMST--SFDLYTTAPPFNDPSHYRRLVGFLQYLTF-TRPGIVFSL 129
            +L    M +  + + P+ +  +++L  +    N P   R L+G L Y+   TRP +  ++
Sbjct: 1146 ILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC--RSLIGCLMYIMLCTRPDLTTAV 1205

Query: 130  NRVSQFMHKPTVIHFSVVKRILKYLRG 154
            N +S++  K     +  +KR+L+YL+G
Sbjct: 1206 NILSRYSSKNNSELWQNLKRVLRYLKG 1230

[Close]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL
Match: A0A1S4E1E5 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991416 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.6e-59
Identity = 118/144 (81.94%), Postives = 126/144 (87.50%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVT  DY YIS+LKNQLALEFKI DL PLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 119 LYVDDIIVTEPDYLYISVLKNQLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLND 178

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTS KSC  PMSTSFDLYT APPFNDPS YRRLVG LQYLTFTRP I FS+NRV
Sbjct: 179 LLHTSGMTSVKSCITPMSTSFDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRV 238

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
           SQFMHKPT+IHFS VKRIL+YLRG
Sbjct: 239 SQFMHKPTIIHFSAVKRILRYLRG 262

[Close]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.4e-58
Identity = 118/148 (79.73%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTGLDY YI +LKNQLALEFKI +LGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 341 LYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLND 400

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDP  YRRLVG LQYLTFTRP I  S+NRV
Sbjct: 401 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRV 460

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHFS VKRIL+YL G   L
Sbjct: 461 SQFMHKPTVIHFSAVKRILRYLCGTPTL 488

[Close]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL
Match: A0A5A7U7J4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001750 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 118/148 (79.73%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTG DY YIS+ KNQLALEFKI DLGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 504 LYVDDIIVTGPDYLYISVFKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLND 563

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQ LTFTR  I FS+NRV
Sbjct: 564 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQCLTFTRSDIAFSVNRV 623

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHF  VKRIL+YLRG   L
Sbjct: 624 SQFMHKPTVIHFLAVKRILRYLRGTPTL 651

[Close]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL
Match: A0A5D3C579 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001010 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 118/148 (79.73%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   IVTG DY YIS+ KNQLALEFKI DLGPLKYFLGL+IQ+SI+GIFVN AK+LND
Sbjct: 446 LYVDDIIVTGPDYLYISVFKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLND 505

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQ LTFTR  I FS+NRV
Sbjct: 506 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQCLTFTRSDIAFSVNRV 565

Query: 130 SQFMHKPTVIHFSVVKRILKYLRGIQPL 158
           SQFMHKPTVIHF  VKRIL+YLRG   L
Sbjct: 566 SQFMHKPTVIHFLAVKRILRYLRGTPTL 593

[Close]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL
Match: A0A5A7TVN4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00500 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.5e-57
Identity = 117/144 (81.25%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           L +   IVT  DYSYIS+LKNQL LEFKI DLGPLKYFL L+IQ+SI+GIFVN AK+LND
Sbjct: 213 LALDDIIVTEPDYSYISVLKNQLDLEFKISDLGPLKYFLDLEIQSSIDGIFVNQAKYLND 272

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           LLHTSGMTSAKSC  PMSTS DLYT APPFNDPS YRRLVG LQYLTFTRPGI FS+NRV
Sbjct: 273 LLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPGIAFSINRV 332

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
           SQFMHKPTVIHFS VK IL+YLRG
Sbjct: 333 SQFMHKPTVIHFSAVKCILRYLRG 356

[Close]

BLAST of Cmc12g0326851 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 5.8e-27
Identity = 55/144 (38.19%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 10  LYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKFLND 69
           LYV   ++TG   + +++L  QL+  F + DLGP+ YFLG++I+T   G+F++  K+   
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 70  LLHTSGMTSAKSCTAPMSTSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVFSLNRV 129
           +L+ +GM   K  + P+    +   +   + DPS +R +VG LQYLT TRP I +++N V
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIV 124

Query: 130 SQFMHKPTVIHFSVVKRILKYLRG 154
            Q MH+PT+  F ++KR+L+Y++G
Sbjct: 125 CQRMHEPTLADFDLLKRVLRYVKG 148

[Close]

BLAST of Cmc12g0326851 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 7   CQSLYVSSTIVTGLDYSYISLLKNQLALEFKIFDLGPLKYFLGLKIQTSIEGIFVNHAKF 66
           C  +YV   I+   + + +  LK+QL   FK+ DLGPLKYFLGL+I  S  GI +   K+
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338

Query: 67  LNDLLHTSGMTSAKSCTAPM--STSFDLYTTAPPFNDPSHYRRLVGFLQYLTFTRPGIVF 126
             DLL  +G+   K  + PM  S +F  + +   F D   YRRL+G L YL  TR  I F
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAH-SGGDFVDAKAYRRLIGRLMYLQITRLDISF 398

Query: 127 SLNRVSQFMHKPTVIHFSVVKRILKYLRG 154
           ++N++SQF   P + H   V +IL Y++G
Sbjct: 399 AVNKLSQFSEAPRLAHQQAVMKILHYIKG 426

The following BLAST results are available for this feature:

BLAST of Cmc12g0326851 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901810.1	1.6e-58	81.94	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0045362.1	1.7e-57	79.73	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK06402.1	3.9e-57	79.73	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0050146.1	3.9e-57	79.73	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0045445.1	5.1e-57	81.25	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0326851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	8.2e-26	38.19	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	1.9e-22	39.73	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	7.9e-21	36.55	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	8.2e-10	25.17	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc12g0326851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1E5	7.6e-59	81.94	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TPR4	8.4e-58	79.73	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7U7J4	1.9e-57	79.73	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3C579	1.9e-57	79.73	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TVN4	2.5e-57	81.25	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Cmc12g0326851 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	5.8e-27	38.19	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	3.3e-22	40.27	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 9..86 e-value: 2.2E-12 score: 47.1
None	No IPR available	PANTHER	PTHR11439:SF313	SUBFAMILY NOT NAMED	coord: 45..149
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 45..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0326851.1	Cmc12g0326851.1	mRNA