Homology
BLAST of Cmc12g0326361 vs. NCBI nr
Match:
TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 318.2 bits (814), Expect = 5.0e-83
Identity = 175/273 (64.10%), Postives = 180/273 (65.93%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 672 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 731
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 732 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 791
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 792 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 851
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 852 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 911
BLAST of Cmc12g0326361 vs. NCBI nr
Match:
TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 315.5 bits (807), Expect = 3.2e-82
Identity = 174/273 (63.74%), Postives = 179/273 (65.57%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 961
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 962 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 1021
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 1022 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 1081
BLAST of Cmc12g0326361 vs. NCBI nr
Match:
KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 315.5 bits (807), Expect = 3.2e-82
Identity = 174/273 (63.74%), Postives = 179/273 (65.57%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 961
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 962 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 1021
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 1022 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 1081
BLAST of Cmc12g0326361 vs. NCBI nr
Match:
KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])
HSP 1 Score: 288.1 bits (736), Expect = 5.5e-74
Identity = 160/245 (65.31%), Postives = 165/245 (67.35%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLV--------- 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARL+
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLILSIAVHFDM 901
Query: 61 ------------------------AKGYTQKEGVD----------------------FHE 120
KGY K D F
Sbjct: 902 FIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDT 961
Query: 121 IFSPVEFHRNSYDACVYWKLSQKGTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMK 180
FHRNSYDACVYWK SQKGTYIYLLLYVDDMILV KDYA ICELK+QLSNEFEMK
Sbjct: 962 FILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMK 1021
Query: 181 DLDELKRILGMDVKRDRKKGLLTISQQSYVIKLLEKYNMSGRKAVSTPLASHFRLSLSQC 191
DL ELKRILGMDVKRDR+KGLLTISQ+SYVIKLLEKYNMS KAVSTPLASHFRLS SQC
Sbjct: 1022 DLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQC 1081
BLAST of Cmc12g0326361 vs. NCBI nr
Match:
TYK21344.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 143/195 (73.33%), Postives = 149/195 (76.41%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
MEAEFFSLHKNQIWSLVPKP NQKLIQSK IYKIKPSTGGNSKPRYKARLVAKGYTQKEG
Sbjct: 490 MEAEFFSLHKNQIWSLVPKPLNQKLIQSKLIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 549
Query: 61 VDFHEIFSPV-----EFHRNSYDACVY------WKLSQK--------------------- 120
VDFHEIFSPV F + +Y +K+ K
Sbjct: 550 VDFHEIFSPVMDVTITFLHGELEEVIYMAQPKGYKVKCKEDMVCRLYKSLYGLKQSPRQW 609
Query: 121 --GTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGL 162
GTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLD+LKRILGMDVKRDRKKGL
Sbjct: 610 YIGTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLDKLKRILGMDVKRDRKKGL 669
BLAST of Cmc12g0326361 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 5.1e-30
Identity = 88/271 (32.47%), Postives = 124/271 (45.76%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
M+ E SL KN + LV P ++ ++ K+++K+K G RYKARLV KG+ QK+G
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK-KDGDCKLVRYKARLVVKGFEQKKG 889
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
+DF EIFSPV
Sbjct: 890 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 949
Query: 121 ------EFHRNSY---------------------------DACVYWKLSQKGTYIYLLLY 180
+ +++ Y D CVY+K + +I LLLY
Sbjct: 950 KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1009
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 189
VDDM++V KD I +LK LS F+MKDL ++ILGM + R+R L +SQ+ Y+ +
Sbjct: 1010 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1069
BLAST of Cmc12g0326361 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 72/259 (27.80%), Postives = 109/259 (42.08%), Query Frame = 0
Query: 9 HK-NQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEGVDFHEIF 68
HK N W++ +P N+ ++ S++++ +K + GN RYKARLVA+G+TQK +D+ E F
Sbjct: 917 HKINNTWTITKRPENKNIVDSRWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETF 976
Query: 69 SPV--------------------------------------------------------- 128
+PV
Sbjct: 977 APVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLN 1036
Query: 129 ------------------------EFHRNSYDACVYWKLSQKGTY---IYLLLYVDDMIL 183
EF +S D C+Y + KG IY+LLYVDD+++
Sbjct: 1037 KAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIY--ILDKGNINENIYVLLYVDDVVI 1096
BLAST of Cmc12g0326361 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 4.8e-12
Identity = 70/255 (27.45%), Postives = 105/255 (41.18%), Query Frame = 0
Query: 11 NQIWSLVPKPPNQ-KLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSP 70
N W LVP PP+ ++ ++I+ K ++ G S RYKARLVAKGY Q+ G+D+ E FSP
Sbjct: 982 NHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSP 1041
Query: 71 V---------------------------EFHRNSYDACVY-------------------- 130
V F + + VY
Sbjct: 1042 VIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLR 1101
Query: 131 ------------WKLS----------------------QKG-TYIYLLLYVDDMILVCKD 183
W + Q+G + +Y+L+YVDD+++ D
Sbjct: 1102 KALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGND 1161
BLAST of Cmc12g0326361 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 66/255 (25.88%), Postives = 103/255 (40.39%), Query Frame = 0
Query: 11 NQIWSLV-PKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSP 70
N W LV P PP+ ++ ++I+ K ++ G S RYKARLVAKGY Q+ G+D+ E FSP
Sbjct: 965 NHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSP 1024
Query: 71 V------------------------------------EFHR------------------- 130
V E +
Sbjct: 1025 VIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLR 1084
Query: 131 ---------------------------NSYDACVYWKLSQKGTYIYLLLYVDDMILVCKD 183
NS + L + + IY+L+YVDD+++ D
Sbjct: 1085 KAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGND 1144
BLAST of Cmc12g0326361 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 2.2e-09
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
M+ E +L +N+ W LVP P NQ ++ K+++K K + G + R KARLVAKG+ Q+EG
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEG 103
Query: 61 VDFHEIFSPV 71
+ F E +SPV
Sbjct: 104 IYFVETYSPV 112
BLAST of Cmc12g0326361 vs. ExPASy TrEMBL
Match:
A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)
HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83
Identity = 175/273 (64.10%), Postives = 180/273 (65.93%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 672 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 731
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 732 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 791
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 792 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 851
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 852 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 911
BLAST of Cmc12g0326361 vs. ExPASy TrEMBL
Match:
A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 174/273 (63.74%), Postives = 179/273 (65.57%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 961
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 962 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 1021
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 1022 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 1081
BLAST of Cmc12g0326361 vs. ExPASy TrEMBL
Match:
A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 174/273 (63.74%), Postives = 179/273 (65.57%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARLVAKGYTQKEG
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901
Query: 61 VDFHEIFSPV-------------------------------------------------- 120
VDFHEIFSPV
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKG 961
Query: 121 ---------------------------------EFHRNSYDACVYWKLSQKGTYIYLLLY 180
FHRNSYDACVYWK SQKGTYIYLLLY
Sbjct: 962 KEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLY 1021
Query: 181 VDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQQSYVIK 191
VDDMILV KDYAEICELK+QLSNEFEMKDL ELKRILGMDVKRD++KGLLTISQ+SYVIK
Sbjct: 1022 VDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIK 1081
BLAST of Cmc12g0326361 vs. ExPASy TrEMBL
Match:
A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 2.7e-74
Identity = 160/245 (65.31%), Postives = 165/245 (67.35%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLV--------- 60
ME E FSLHKNQ WSLVPKPPNQKLIQSK+IYKIKP TGGNSKPRYKARL+
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLILSIAVHFDM 901
Query: 61 ------------------------AKGYTQKEGVD----------------------FHE 120
KGY K D F
Sbjct: 902 FIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDT 961
Query: 121 IFSPVEFHRNSYDACVYWKLSQKGTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMK 180
FHRNSYDACVYWK SQKGTYIYLLLYVDDMILV KDYA ICELK+QLSNEFEMK
Sbjct: 962 FILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMK 1021
Query: 181 DLDELKRILGMDVKRDRKKGLLTISQQSYVIKLLEKYNMSGRKAVSTPLASHFRLSLSQC 191
DL ELKRILGMDVKRDR+KGLLTISQ+SYVIKLLEKYNMS KAVSTPLASHFRLS SQC
Sbjct: 1022 DLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQC 1081
BLAST of Cmc12g0326361 vs. ExPASy TrEMBL
Match:
A0A5D3DCM9 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00120 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 6.0e-66
Identity = 143/195 (73.33%), Postives = 149/195 (76.41%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
MEAEFFSLHKNQIWSLVPKP NQKLIQSK IYKIKPSTGGNSKPRYKARLVAKGYTQKEG
Sbjct: 490 MEAEFFSLHKNQIWSLVPKPLNQKLIQSKLIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 549
Query: 61 VDFHEIFSPV-----EFHRNSYDACVY------WKLSQK--------------------- 120
VDFHEIFSPV F + +Y +K+ K
Sbjct: 550 VDFHEIFSPVMDVTITFLHGELEEVIYMAQPKGYKVKCKEDMVCRLYKSLYGLKQSPRQW 609
Query: 121 --GTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGL 162
GTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLD+LKRILGMDVKRDRKKGL
Sbjct: 610 YIGTYIYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLDKLKRILGMDVKRDRKKGL 669
BLAST of Cmc12g0326361 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 86.7 bits (213), Expect = 2.3e-17
Identity = 71/260 (27.31%), Postives = 109/260 (41.92%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
M+ E ++ W + PPN+K I K++YKIK ++ G + RYKARLVAKGYTQ+EG
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEG 161
Query: 61 VDFHEIFSPV---------------------------EFHRNSYDACVYWKL-----SQK 120
+DF E FSPV F D +Y KL +++
Sbjct: 162 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 221
Query: 121 G------------------------------------------------------TYIYL 175
G ++ +
Sbjct: 222 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 281
BLAST of Cmc12g0326361 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 1 MEAEFFSLHKNQIWSLVPKPPNQKLIQSKFIYKIKPSTGGNSKPRYKARLVAKGYTQKEG 60
M+ E +L +N+ W LVP P NQ ++ K+++K K + G + R KARLVAKG+ Q+EG
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEG 103
Query: 61 VDFHEIFSPV 71
+ F E +SPV
Sbjct: 104 IYFVETYSPV 112
BLAST of Cmc12g0326361 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 48.1 bits (113), Expect = 8.9e-06
Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0
Query: 92 IYLLLYVDDMILVCKDYAEICELKRQLSNEFEMKDLDELKRILGMDVKRDRKKGLLTISQ 151
+YLLLYVDD++L + L QLS+ F MKDL + LG+ +K GL +SQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK-THPSGLF-LSQ 60
Query: 152 QSYVIKLLEKYNMSGRKAVSTPLASHFRLSLS 184
Y ++L M K +STPL S+S
Sbjct: 61 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS 90
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK13826.1 | 5.0e-83 | 64.10 | putative polyprotein [Cucumis melo var. makuwa] | [more] |
TYK25306.1 | 3.2e-82 | 63.74 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0050719.1 | 3.2e-82 | 63.74 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0047995.1 | 5.5e-74 | 65.31 | retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... | [more] |
TYK21344.1 | 1.2e-65 | 73.33 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 5.1e-30 | 32.47 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 3.1e-19 | 27.80 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 4.8e-12 | 27.45 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.2e-10 | 25.88 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P92520 | 2.2e-09 | 45.71 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CTV2 | 2.4e-83 | 64.10 | Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488... | [more] |
A0A5D3DNU1 | 1.6e-82 | 63.74 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A5A7UB25 | 1.6e-82 | 63.74 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
A0A5A7U2U7 | 2.7e-74 | 65.31 | Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... | [more] |
A0A5D3DCM9 | 6.0e-66 | 73.33 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 2.3e-17 | 27.31 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.6e-10 | 45.71 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00810.1 | 8.9e-06 | 38.04 | DNA/RNA polymerases superfamily protein | [more] |