Homology
BLAST of Cmc12g0326351 vs. NCBI nr
Match:
TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 298/328 (90.85%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 111 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTDMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. NCBI nr
Match:
KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 298/328 (90.85%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 111 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTDMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. NCBI nr
Match:
KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 569.3 bits (1466), Expect = 2.1e-158
Identity = 297/328 (90.55%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 61 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 121 GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 181 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKL+GT RHGLYVLEGTTVSGSAAI
Sbjct: 241 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 301 ASGKVTDMSMLWHKRLAHVSERGLQALS 328
BLAST of Cmc12g0326351 vs. NCBI nr
Match:
KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])
HSP 1 Score: 559.3 bits (1440), Expect = 2.2e-155
Identity = 294/328 (89.63%), Postives = 304/328 (92.68%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSK LEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYG DSLT
Sbjct: 111 MDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + DS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV +MSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTNMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. NCBI nr
Match:
KAA0067607.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ97155.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 548.9 bits (1413), Expect = 3.0e-152
Identity = 288/326 (88.34%), Postives = 296/326 (90.80%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKII+DL+NI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 107 MDQSKSLEENLDEFQKIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 166
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG
Sbjct: 167 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG 226
Query: 121 YFKKNCPLNKSREVSTSEANVTDGYKRLLMGTYDSSETGYESAEVLMVSYRDIQDAWIMD 180
+FKKNCPLNKSRE STSEANVTDGY + GYESAEVLMVS+RDIQDAWIMD
Sbjct: 227 HFKKNCPLNKSREASTSEANVTDGY------NFAEITDGYESAEVLMVSHRDIQDAWIMD 286
Query: 181 SGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATYVP 240
SGCTFHMTP+RDFLTNFQKGDGGKVLLG N CDVK TGSVQIATHD +VRILTN YVP
Sbjct: 287 SGCTFHMTPHRDFLTNFQKGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVP 346
Query: 241 KLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAIAS 300
KLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGS AIAS
Sbjct: 347 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIAS 406
Query: 301 GKVIDMSMLWHKRLAHVSERGLQALS 327
GKV M MLWH RLAHVSERGLQALS
Sbjct: 407 GKVTYMFMLWHNRLAHVSERGLQALS 426
BLAST of Cmc12g0326351 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 1.2e-34
Identity = 104/335 (31.04%), Postives = 168/335 (50.15%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
M + + +L+ F +I L N+ K+ +E++A++LLNSLP +Y + I +G+ ++
Sbjct: 112 MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLM--ARGRSEKKSWKGKERS-----SRSKSKGKSRK 120
+ V AL KK G+ L+ RGRS ++S RS S+++SK + R
Sbjct: 172 LKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN 231
Query: 121 CFLCHK-GYFKKNCPLNKSREVSTSEANVTDGYKRLLMGTYDSSETGYESAEVLMVSYRD 180
C+ C++ G+FK++CP + + TS D ++ + E E + +S
Sbjct: 232 CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLS--G 291
Query: 181 IQDAWIMDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRI 240
+ W++D+ + H TP RD + GD G V +G + G G + I T+ G +
Sbjct: 292 PESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLV 351
Query: 241 LTNATYVPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTV 300
L + +VP L+ NLIS LDR G N ++TKGSLV +G R LY
Sbjct: 352 LKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEIC 411
Query: 301 SGSAAIASGKV-IDMSMLWHKRLAHVSERGLQALS 327
G A ++ +D LWHKR+ H+SE+GLQ L+
Sbjct: 412 QGELNAAQDEISVD---LWHKRMGHMSEKGLQILA 441
BLAST of Cmc12g0326351 vs. ExPASy Swiss-Prot
Match:
P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 3.9e-06
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 264 GVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHKRLAHVSERGLQ 323
GV+KV KG L+G LY+L+G+ +G + +A D + LWH RLAH+S+RG++
Sbjct: 27 GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86
Query: 324 AL 326
L
Sbjct: 87 LL 87
BLAST of Cmc12g0326351 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04
Identity = 40/144 (27.78%), Postives = 66/144 (45.83%), Query Frame = 0
Query: 177 WIMDSGCTFHMTPYRDFLTNFQKGDGG-KVLLGGNVTCDVKGTGSVQIATHDGIVRILTN 236
W++DSG T H+T + L+ Q GG V++ T + TGS ++T + L N
Sbjct: 331 WLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLN-LHN 390
Query: 237 ATYVPKLKRNLISLSEL-DRSGCTIK--SENGVMKVTKGSLVKLRGTWRHGLYVLEGTTV 296
YVP + +NLIS+ L + +G +++ + +K + L+G + LY +
Sbjct: 391 ILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 450
Query: 297 SGSAAIASGKVIDMSMLWHKRLAH 317
+ AS WH RL H
Sbjct: 451 QPVSLFASPSSKATHSSWHARLGH 473
BLAST of Cmc12g0326351 vs. ExPASy TrEMBL
Match:
A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)
HSP 1 Score: 570.1 bits (1468), Expect = 6.0e-159
Identity = 298/328 (90.85%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 111 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTDMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. ExPASy TrEMBL
Match:
A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)
HSP 1 Score: 570.1 bits (1468), Expect = 6.0e-159
Identity = 298/328 (90.85%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 111 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTDMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. ExPASy TrEMBL
Match:
A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)
HSP 1 Score: 569.3 bits (1466), Expect = 1.0e-158
Identity = 297/328 (90.55%), Postives = 307/328 (93.60%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1 MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 61 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + YDS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 121 GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 181 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKL+GT RHGLYVLEGTTVSGSAAI
Sbjct: 241 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV DMSMLWHKRLAHVSERGLQALS
Sbjct: 301 ASGKVTDMSMLWHKRLAHVSERGLQALS 328
BLAST of Cmc12g0326351 vs. ExPASy TrEMBL
Match:
A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)
HSP 1 Score: 559.3 bits (1440), Expect = 1.1e-155
Identity = 294/328 (89.63%), Postives = 304/328 (92.68%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSK LEENLDEFQKI++DLNNI EKMSDENQAVILLNSLPETYREVKAAIKYG DSLT
Sbjct: 111 MDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLT 170
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK- 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERS RSKSKGKSRKCFLCHK
Sbjct: 171 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
Query: 121 GYFKKNCPLNKSREVSTSEANVTDGYKRL-LMGTYDSSETGYESAEVLMVSYRDIQDAWI 180
G+FKKNCPLNKSRE STSEANVTDGY + DS+ETGYESAEVLMVS+RDIQDAWI
Sbjct: 231 GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
Query: 181 MDSGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATY 240
MDSGCTFHMTP+RDFLTNFQK DGGKVLLG N TCDVKGTGSVQIATHDG+VRILTN Y
Sbjct: 291 MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
Query: 241 VPKLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAI 300
VPKLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGSAAI
Sbjct: 351 VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
Query: 301 ASGKVIDMSMLWHKRLAHVSERGLQALS 327
ASGKV +MSMLWHKRLAHVSERGLQALS
Sbjct: 411 ASGKVTNMSMLWHKRLAHVSERGLQALS 438
BLAST of Cmc12g0326351 vs. ExPASy TrEMBL
Match:
A0A5A7VKC2 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00310 PE=4 SV=1)
HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 288/326 (88.34%), Postives = 296/326 (90.80%), Query Frame = 0
Query: 1 MDQSKSLEENLDEFQKIIIDLNNISEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60
MDQSKSLEENLDEFQKII+DL+NI EKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 107 MDQSKSLEENLDEFQKIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 166
Query: 61 MSIVLDALKTRNLEMKKEHKAGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG 120
MSIVLDALKTRNLE+KKE K GELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG
Sbjct: 167 MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHKG 226
Query: 121 YFKKNCPLNKSREVSTSEANVTDGYKRLLMGTYDSSETGYESAEVLMVSYRDIQDAWIMD 180
+FKKNCPLNKSRE STSEANVTDGY + GYESAEVLMVS+RDIQDAWIMD
Sbjct: 227 HFKKNCPLNKSREASTSEANVTDGY------NFAEITDGYESAEVLMVSHRDIQDAWIMD 286
Query: 181 SGCTFHMTPYRDFLTNFQKGDGGKVLLGGNVTCDVKGTGSVQIATHDGIVRILTNATYVP 240
SGCTFHMTP+RDFLTNFQKGDGGKVLLG N CDVK TGSVQIATHD +VRILTN YVP
Sbjct: 287 SGCTFHMTPHRDFLTNFQKGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVP 346
Query: 241 KLKRNLISLSELDRSGCTIKSENGVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAIAS 300
KLKRNLISL ELDRSGCTIKSENGVMKVTKGSLVKLRGT RHGLYVLEGTTVSGS AIAS
Sbjct: 347 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIAS 406
Query: 301 GKVIDMSMLWHKRLAHVSERGLQALS 327
GKV M MLWH RLAHVSERGLQALS
Sbjct: 407 GKVTYMFMLWHNRLAHVSERGLQALS 426
BLAST of Cmc12g0326351 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 53.9 bits (128), Expect = 2.8e-07
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 264 GVMKVTKGSLVKLRGTWRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHKRLAHVSERGLQ 323
GV+KV KG L+G LY+L+G+ +G + +A D + LWH RLAH+S+RG++
Sbjct: 27 GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86
Query: 324 AL 326
L
Sbjct: 87 LL 87
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK25306.1 | 1.2e-158 | 90.85 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0050719.1 | 1.2e-158 | 90.85 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0043826.1 | 2.1e-158 | 90.55 | putative gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0047995.1 | 2.2e-155 | 89.63 | retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... | [more] |
| KAA0067607.1 | 3.0e-152 | 88.34 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 1.2e-34 | 31.04 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P93293 | 3.9e-06 | 41.94 | Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ... | [more] |
| Q94HW2 | 1.6e-04 | 27.78 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DNU1 | 6.0e-159 | 90.85 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
| A0A5A7UB25 | 6.0e-159 | 90.85 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
| A0A5A7TP18 | 1.0e-158 | 90.55 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
| A0A5A7U2U7 | 1.1e-155 | 89.63 | Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... | [more] |
| A0A5A7VKC2 | 1.4e-152 | 88.34 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| ATMG00300.1 | 2.8e-07 | 41.94 | Gag-Pol-related retrotransposon family protein | [more] |
