Cmc12g0325581 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTCCATCCCAATTCGGATCTTTTCCTCTCCCCCACTCCCACTTTATCCCACGCGCCTTCACACCCCCGACACCCCCAATAAACTCTCTTCCTCTTTTCCCACTCCAACCCTTTCCTCCCTCCCTCTCTCGCTCTCTCTTTTCTTTTTCTTTTTCTTTTTCGTCCCCCATGAAGAAGCTCTACCGCAAAACAGGAACCGTCCACCCTTCTCCCCCTCTCATCTCCGATCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCTCTTCCGCCCTCTCTCTCCAGGACCGGGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCCCCGTCCACAATTCCTCCACCCACCGCGGCAAGGCAGCTCACCACAAACACGCCGCCCCCATGGCCGGTTCGGATCACCCCCCGGCCTTCTCCTGCTACTGTTTCCAATGCTACACCAGCTACTGGGTCAGATGGGATTCCTCACCCAATCGGCAACTGATTCACGAAATCATCGACGCTTATGAAGACAAATTGGCCGAGACCAAAGTTGGGAAGAACAATAAGAAAGAGAGAAAGAAGCGAAATAGTAGCGGGACGGTTTCCGGTCCGGGTGAGGGGAAAGGGGCTGAAGCGGCGGCGAAGGTAGAAGAGTGGAAGGTGACGGAAGGCGGCGAGGAGGAGGCGGAGAAAGGGCCGGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAAGTGATTGGATTTTGCACTAATGGATGCATTTGGAGGTTTTGGGTTTTTATATATGTTTGTGAATTAATTAGTTTGCAGTAATTAGGAAGGAATTGAAGAAGAAGAAGAAGAAGAAAAGGGTGTTCTTATAAACATAATTACAATACCATCTTCTTCTTTTTCTTTGTTTTGATTCAGGTTATGGTTGTTAGTAAGTTGTATATAGAATCTTATGTTTTTCATGTACAAATTTATCAATATATATATATATATATATATATAAAGAAATTAGAATTTTTATTTAGTATATATATGTGTGTTTGTTTTTAATGACCTCTTTTATTTCTACTTT TATTTCCATCCCAATTCGGATCTTTTCCTCTCCCCCACTCCCACTTTATCCCACGCGCCTTCACACCCCCGACACCCCCAATAAACTCTCTTCCTCTTTTCCCACTCCAACCCTTTCCTCCCTCCCTCTCTCGCTCTCTCTTTTCTTTTTCTTTTTCTTTTTCGTCCCCCATGAAGAAGCTCTACCGCAAAACAGGAACCGTCCACCCTTCTCCCCCTCTCATCTCCGATCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCTCTTCCGCCCTCTCTCTCCAGGACCGGGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCCCCGTCCACAATTCCTCCACCCACCGCGGCAAGGCAGCTCACCACAAACACGCCGCCCCCATGGCCGGTTCGGATCACCCCCCGGCCTTCTCCTGCTACTGTTTCCAATGCTACACCAGCTACTGGGTCAGATGGGATTCCTCACCCAATCGGCAACTGATTCACGAAATCATCGACGCTTATGAAGACAAATTGGCCGAGACCAAAGTTGGGAAGAACAATAAGAAAGAGAGAAAGAAGCGAAATAGTAGCGGGACGGTTTCCGGTCCGGGTGAGGGGAAAGGGGCTGAAGCGGCGGCGAAGGTAGAAGAGTGGAAGGTGACGGAAGGCGGCGAGGAGGAGGCGGAGAAAGGGCCGGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAAGTGATTGGATTTTGCACTAATGGATGCATTTGGAGGTTTTGGGTTTTTATATATGTTTGTGAATTAATTAGTTTGCAGTAATTAGGAAGGAATTGAAGAAGAAGAAGAAGAAGAAAAGGGTGTTCTTATAAACATAATTACAATACCATCTTCTTCTTTTTCTTTGTTTTGATTCAGGTTATGGTTGTTAGTAAGTTGTATATAGAATCTTATGTTTTTCATGTACAAATTTATCAATATATATATATATATATATATATAAAGAAATTAGAATTTTTATTTAGTATATATATGTGTGTTTGTTTTTAATGACCTCTTTTATTTCTACTTT ATGAAGAAGCTCTACCGCAAAACAGGAACCGTCCACCCTTCTCCCCCTCTCATCTCCGATCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCTCTTCCGCCCTCTCTCTCCAGGACCGGGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCCCCGTCCACAATTCCTCCACCCACCGCGGCAAGGCAGCTCACCACAAACACGCCGCCCCCATGGCCGGTTCGGATCACCCCCCGGCCTTCTCCTGCTACTGTTTCCAATGCTACACCAGCTACTGGGTCAGATGGGATTCCTCACCCAATCGGCAACTGATTCACGAAATCATCGACGCTTATGAAGACAAATTGGCCGAGACCAAAGTTGGGAAGAACAATAAGAAAGAGAGAAAGAAGCGAAATAGTAGCGGGACGGTTTCCGGTCCGGGTGAGGGGAAAGGGGCTGAAGCGGCGGCGAAGGTAGAAGAGTGGAAGGTGACGGAAGGCGGCGAGGAGGAGGCGGAGAAAGGGCCGGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAA MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHNSSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEDKLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVTEGGEEEAEKGPVRRIVSLLGEKIWGSWN Homology
BLAST of Cmc12g0325581 vs. NCBI nr
Match: XP_008458978.1 (PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo] >KAA0054306.1 uncharacterized protein E6C27_scaffold24G00250 [Cucumis melo var. makuwa] >TYK12343.1 uncharacterized protein E5676_scaffold302G001180 [Cucumis melo var. makuwa]) HSP 1 Score: 389.0 bits (998), Expect = 2.3e-104 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of Cmc12g0325581 vs. NCBI nr
Match: XP_004150423.1 (uncharacterized protein LOC101221021 [Cucumis sativus]) HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87 Identity = 167/197 (84.77%), Postives = 176/197 (89.34%), Query Frame = 0
BLAST of Cmc12g0325581 vs. NCBI nr
Match: KAE8652887.1 (hypothetical protein Csa_017671 [Cucumis sativus]) HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87 Identity = 167/197 (84.77%), Postives = 176/197 (89.34%), Query Frame = 0
BLAST of Cmc12g0325581 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida]) HSP 1 Score: 305.8 bits (782), Expect = 2.6e-79 Identity = 159/198 (80.30%), Postives = 172/198 (86.87%), Query Frame = 0
BLAST of Cmc12g0325581 vs. NCBI nr
Match: KAG7019402.1 (hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.7 bits (753), Expect = 5.9e-76 Identity = 151/200 (75.50%), Postives = 170/200 (85.00%), Query Frame = 0
BLAST of Cmc12g0325581 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of Cmc12g0325581 vs. ExPASy TrEMBL
Match: A0A1S3C9P0 (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of Cmc12g0325581 vs. ExPASy TrEMBL
Match: A0A0A0LVV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 167/197 (84.77%), Postives = 176/197 (89.34%), Query Frame = 0
BLAST of Cmc12g0325581 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 6.4e-76 Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0
BLAST of Cmc12g0325581 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 5.1e-73 Identity = 148/203 (72.91%), Postives = 166/203 (81.77%), Query Frame = 0
BLAST of Cmc12g0325581 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35 Identity = 105/231 (45.45%), Postives = 130/231 (56.28%), Query Frame = 0
BLAST of Cmc12g0325581 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 139.4 bits (350), Expect = 3.0e-33 Identity = 97/205 (47.32%), Postives = 122/205 (59.51%), Query Frame = 0
BLAST of Cmc12g0325581 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 95.9 bits (237), Expect = 3.8e-20 Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 0
BLAST of Cmc12g0325581 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19 Identity = 63/145 (43.45%), Postives = 74/145 (51.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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