Cmc12g0324081 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0324081
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
LocationCMiso1.1chr12: 13417805 .. 13418494 (+)
RNA-Seq ExpressionCmc12g0324081
SyntenyCmc12g0324081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAGAATGACAGGTCTGATGTTGCTGTTCTTGAAAATGTGGAAGAAATAAACAGTGGTGATGAGACTAAGGTCAGAACAGAAACCAATAACAATGAAGCTGAACAGGGTCATACAGGGAAACTTGATAAGTATGATCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTGTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGCCTTGACTCTACCACAATACCGAAAAATATTCATATTGCTTTAGAAGGCCCTGAATGGAAAAATGCTGTCATGGAAGAGATGAAAACTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTTTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGGAACACTTGACAGGCACAAGGCAAGGTTAGTTGCAAAAGGATTTACTCAGACCTATGGTGTTGATTATTCAGAAACTTTTTCTTCTGTTGCTAAGTTGAATACTGTCAGAGTCCTTTCTGTTGCTGTAAACAAAGATTGGCCTCTATATCAGCTGGATGTTAAAAATGCTTTTCTAAATGGAGATCTAGCAGAGGAGGTCTACATGAGCCCTCCGCCTGGCTTTGAAGCCCAGTTTGGTCAATAG

mRNA sequence

ATGAATGAGAATGACAGGTCTGATGTTGCTGTTCTTGAAAATGTGGAAGAAATAAACAGTGGTGATGAGACTAAGGTCAGAACAGAAACCAATAACAATGAAGCTGAACAGGGTCATACAGGGAAACTTGATAAGTATGATCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTGTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGCCTTGACTCTACCACAATACCGAAAAATATTCATATTGCTTTAGAAGGCCCTGAATGGAAAAATGCTGTCATGGAAGAGATGAAAACTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTTTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGGAACACTTGACAGGCACAAGGCAAGGTTAGTTGCAAAAGGATTTACTCAGACCTATGGTGTTGATTATTCAGAAACTTTTTCTTCTGTTGCTAAGTTGAATACTGTCAGAGTCCTTTCTGTTGCTGTAAACAAAGATTGGCCTCTATATCAGCTGGATGTTAAAAATGCTTTTCTAAATGGAGATCTAGCAGAGGAGGTCTACATGAGCCCTCCGCCTGGCTTTGAAGCCCAGTTTGGTCAATAG

Coding sequence (CDS)

ATGAATGAGAATGACAGGTCTGATGTTGCTGTTCTTGAAAATGTGGAAGAAATAAACAGTGGTGATGAGACTAAGGTCAGAACAGAAACCAATAACAATGAAGCTGAACAGGGTCATACAGGGAAACTTGATAAGTATGATCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTGTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGCCTTGACTCTACCACAATACCGAAAAATATTCATATTGCTTTAGAAGGCCCTGAATGGAAAAATGCTGTCATGGAAGAGATGAAAACTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTTTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGGAACACTTGACAGGCACAAGGCAAGGTTAGTTGCAAAAGGATTTACTCAGACCTATGGTGTTGATTATTCAGAAACTTTTTCTTCTGTTGCTAAGTTGAATACTGTCAGAGTCCTTTCTGTTGCTGTAAACAAAGATTGGCCTCTATATCAGCTGGATGTTAAAAATGCTTTTCTAAATGGAGATCTAGCAGAGGAGGTCTACATGAGCCCTCCGCCTGGCTTTGAAGCCCAGTTTGGTCAATAG

Protein sequence

MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ
Homology
BLAST of Cmc12g0324081 vs. NCBI nr
Match: KAA0035625.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK30917.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 461.1 bits (1185), Expect = 5.7e-126
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           MNENDRSDVAVLENVEE NSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT
Sbjct: 143 MNENDRSDVAVLENVEEKNSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 202

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSCTKHSISNYVSYENLSPQFRAFTASLDSTTI KNIHIALEGPEWKNAVMEEMKTLEKN
Sbjct: 203 RSCTKHSISNYVSYENLSPQFRAFTASLDSTTISKNIHIALEGPEWKNAVMEEMKTLEKN 262

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK
Sbjct: 263 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 322

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQ DVKNAFLNGDLAEEVYMSPPPGFEAQFGQ
Sbjct: 323 LNTVRVLSVAVNKDWPLYQRDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 371

BLAST of Cmc12g0324081 vs. NCBI nr
Match: KAA0054163.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 209/229 (91.27%), Postives = 218/229 (95.20%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           M+ENDRSDVAVLEN+EE N  DET+VR ET+N+EAEQGHT K D+YDPSLDLPIALRKGT
Sbjct: 620 MSENDRSDVAVLENMEEKNHSDETEVRIETSNDEAEQGHTRKHDEYDPSLDLPIALRKGT 679

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNI+IALE PEWKNAVMEE+K LEKN
Sbjct: 680 RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIYIALECPEWKNAVMEEIKALEKN 739

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHK VGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYS+TFS VAK
Sbjct: 740 NTWEICALPKGHKLVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSKTFSPVAK 799

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 800 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 848

BLAST of Cmc12g0324081 vs. NCBI nr
Match: KAA0055577.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK01345.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-114
Identity = 207/229 (90.39%), Postives = 214/229 (93.45%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           M+ENDRSD AVLEN+EE N GDET+VR ET+N+EAEQGH  K D+YDPSLDLPIALRKGT
Sbjct: 1   MSENDRSDAAVLENMEEKNHGDETEVRIETSNDEAEQGHIRKRDEYDPSLDLPIALRKGT 60

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSC KHSISNYVSYENLSPQFRAFTASLDSTTIPKNI+IALE PEWKNAVMEEMK  EKN
Sbjct: 61  RSCIKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIYIALECPEWKNAVMEEMKAFEKN 120

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHK VGCKWV TLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFS VAK
Sbjct: 121 NTWEICALPKGHKLVGCKWVLTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSPVAK 180

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 229

BLAST of Cmc12g0324081 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 8.8e-111
Identity = 200/230 (86.96%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 1    MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
            M+END+SD+AVLEN+EE N  DET+VR ET+N+EAEQGHT KLD+YDPSLD+PIALRKGT
Sbjct: 976  MSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDPSLDIPIALRKGT 1035

Query: 61   RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
            RSCTKH I NYVSY+NLSPQFRAFTA+LDST IPKNI+ ALE PEWKNAVMEEMK LEKN
Sbjct: 1036 RSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKNAVMEEMKALEKN 1095

Query: 121  NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
             TWEICALPKGHK VGCKWVF+LKYKADGTLDRHKARLVAKGFTQTYG+DYSETFS VAK
Sbjct: 1096 RTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPVAK 1155

Query: 181  LNTVRV-LSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
            LNTVRV LSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 1156 LNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 1205

BLAST of Cmc12g0324081 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 8.8e-111
Identity = 200/230 (86.96%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 1    MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
            M+END+SD+AVLEN+EE N  DET+VR ET+N+EAEQGHT KLD+YDPSLD+PIALRKGT
Sbjct: 1002 MSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDPSLDIPIALRKGT 1061

Query: 61   RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
            RSCTKH I NYVSY+NLSPQFRAFTA+LDST IPKNI+ ALE PEWKNAVMEEMK LEKN
Sbjct: 1062 RSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKNAVMEEMKALEKN 1121

Query: 121  NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
             TWEICALPKGHK VGCKWVF+LKYKADGTLDRHKARLVAKGFTQTYG+DYSETFS VAK
Sbjct: 1122 RTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPVAK 1181

Query: 181  LNTVRV-LSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
            LNTVRV LSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 1182 LNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 1231

BLAST of Cmc12g0324081 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.1e-34
Identity = 70/143 (48.95%), Postives = 97/143 (67.83%), Query Frame = 0

Query: 83   AFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKP-VGCKWVF 142
            +   SL + + P+    AL+   W+NA+  E+     N+TW++   P  H   VGC+W+F
Sbjct: 945  SLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIF 1004

Query: 143  TLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVAVNKDWPLYQL 202
            T KY +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K  ++R VL VAV++ WP+ QL
Sbjct: 1005 TKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1064

Query: 203  DVKNAFLNGDLAEEVYMSPPPGF 224
            DV NAFL G L ++VYMS PPGF
Sbjct: 1065 DVNNAFLQGTLTDDVYMSQPPGF 1087

BLAST of Cmc12g0324081 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 67/143 (46.85%), Postives = 96/143 (67.13%), Query Frame = 0

Query: 83   AFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKP-VGCKWVF 142
            ++  SL + + P+    A++   W+ A+  E+     N+TW++   P      VGC+W+F
Sbjct: 928  SYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIF 987

Query: 143  TLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVAVNKDWPLYQL 202
            T K+ +DG+L+R+KARLVAKG+ Q  G+DY+ETFS V K  ++R VL VAV++ WP+ QL
Sbjct: 988  TKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1047

Query: 203  DVKNAFLNGDLAEEVYMSPPPGF 224
            DV NAFL G L +EVYMS PPGF
Sbjct: 1048 DVNNAFLQGTLTDEVYMSQPPGF 1070

BLAST of Cmc12g0324081 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 0

Query: 94  PKNIHIALEGPEWKN----AVMEEMKTLEKNNTWEICALPKGHKPVGCKWVFTLKYKADG 153
           P+++   L  PE KN    A+ EEM++L+KN T+++  LPKG +P+ CKWVF LK   D 
Sbjct: 811 PESLKEVLSHPE-KNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDC 870

Query: 154 TLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVAVNKDWPLYQLDVKNAFLN 213
            L R+KARLV KGF Q  G+D+ E FS V K+ ++R +LS+A + D  + QLDVK AFL+
Sbjct: 871 KLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 930

Query: 214 GDLAEEVYMSPPPGFE 225
           GDL EE+YM  P GFE
Sbjct: 931 GDLEEEIYMEQPEGFE 945

BLAST of Cmc12g0324081 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-25
Identity = 71/200 (35.50%), Postives = 105/200 (52.50%), Query Frame = 0

Query: 31   NNNEAEQGHTGK------LDKYDPSLDLPIALRKGTRSCTKHSISNYVSYENLSP-QFRA 90
            N NE+ +  T +      +D    +  + I  R+  R  TK  IS      +L+     A
Sbjct: 824  NPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNA 883

Query: 91   FTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKPVGCKWVFTL 150
             T   D       I    +   W+ A+  E+   + NNTW I   P+    V  +WVF++
Sbjct: 884  HTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSV 943

Query: 151  KYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVAVNKDWPLYQLDV 210
            KY   G   R+KARLVA+GFTQ Y +DY ETF+ VA++++ R +LS+ +  +  ++Q+DV
Sbjct: 944  KYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDV 1003

Query: 211  KNAFLNGDLAEEVYMSPPPG 223
            K AFLNG L EE+YM  P G
Sbjct: 1004 KTAFLNGTLKEEIYMRLPQG 1023

BLAST of Cmc12g0324081 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-19
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0

Query: 77  LSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKPVG 136
           L+P++ + T +      PK++  AL+ P W  A+ EE+  L +N TW +   P     +G
Sbjct: 12  LNPKY-SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILG 71

Query: 137 CKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVA 191
           CKWVF  K  +DGTLDR KARLVAKGF Q  G+ + ET+S V +  T+R +L+VA
Sbjct: 72  CKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of Cmc12g0324081 vs. ExPASy TrEMBL
Match: A0A5A7T2E9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001290 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.8e-126
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           MNENDRSDVAVLENVEE NSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT
Sbjct: 143 MNENDRSDVAVLENVEEKNSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 202

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSCTKHSISNYVSYENLSPQFRAFTASLDSTTI KNIHIALEGPEWKNAVMEEMKTLEKN
Sbjct: 203 RSCTKHSISNYVSYENLSPQFRAFTASLDSTTISKNIHIALEGPEWKNAVMEEMKTLEKN 262

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK
Sbjct: 263 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 322

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQ DVKNAFLNGDLAEEVYMSPPPGFEAQFGQ
Sbjct: 323 LNTVRVLSVAVNKDWPLYQRDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 371

BLAST of Cmc12g0324081 vs. ExPASy TrEMBL
Match: A0A5A7UDS7 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00920 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.8e-116
Identity = 209/229 (91.27%), Postives = 218/229 (95.20%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           M+ENDRSDVAVLEN+EE N  DET+VR ET+N+EAEQGHT K D+YDPSLDLPIALRKGT
Sbjct: 620 MSENDRSDVAVLENMEEKNHSDETEVRIETSNDEAEQGHTRKHDEYDPSLDLPIALRKGT 679

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNI+IALE PEWKNAVMEE+K LEKN
Sbjct: 680 RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIYIALECPEWKNAVMEEIKALEKN 739

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHK VGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYS+TFS VAK
Sbjct: 740 NTWEICALPKGHKLVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSKTFSPVAK 799

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 800 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 848

BLAST of Cmc12g0324081 vs. ExPASy TrEMBL
Match: A0A5D3BQ91 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00270 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 207/229 (90.39%), Postives = 214/229 (93.45%), Query Frame = 0

Query: 1   MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
           M+ENDRSD AVLEN+EE N GDET+VR ET+N+EAEQGH  K D+YDPSLDLPIALRKGT
Sbjct: 1   MSENDRSDAAVLENMEEKNHGDETEVRIETSNDEAEQGHIRKRDEYDPSLDLPIALRKGT 60

Query: 61  RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
           RSC KHSISNYVSYENLSPQFRAFTASLDSTTIPKNI+IALE PEWKNAVMEEMK  EKN
Sbjct: 61  RSCIKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIYIALECPEWKNAVMEEMKAFEKN 120

Query: 121 NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
           NTWEICALPKGHK VGCKWV TLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFS VAK
Sbjct: 121 NTWEICALPKGHKLVGCKWVLTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSPVAK 180

Query: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
           LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 181 LNTVRVLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 229

BLAST of Cmc12g0324081 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.3e-111
Identity = 200/230 (86.96%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 1    MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
            M+END+SD+AVLEN+EE N  DET+VR ET+N+EAEQGHT KLD+YDPSLD+PIALRKGT
Sbjct: 1002 MSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDPSLDIPIALRKGT 1061

Query: 61   RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
            RSCTKH I NYVSY+NLSPQFRAFTA+LDST IPKNI+ ALE PEWKNAVMEEMK LEKN
Sbjct: 1062 RSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKNAVMEEMKALEKN 1121

Query: 121  NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
             TWEICALPKGHK VGCKWVF+LKYKADGTLDRHKARLVAKGFTQTYG+DYSETFS VAK
Sbjct: 1122 RTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPVAK 1181

Query: 181  LNTVRV-LSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
            LNTVRV LSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 1182 LNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 1231

BLAST of Cmc12g0324081 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.3e-111
Identity = 200/230 (86.96%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 1    MNENDRSDVAVLENVEEINSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALRKGT 60
            M+END+SD+AVLEN+EE N  DET+VR ET+N+EAEQGHT KLD+YDPSLD+PIALRKGT
Sbjct: 1002 MSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDPSLDIPIALRKGT 1061

Query: 61   RSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKN 120
            RSCTKH I NYVSY+NLSPQFRAFTA+LDST IPKNI+ ALE PEWKNAVMEEMK LEKN
Sbjct: 1062 RSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKNAVMEEMKALEKN 1121

Query: 121  NTWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAK 180
             TWEICALPKGHK VGCKWVF+LKYKADGTLDRHKARLVAKGFTQTYG+DYSETFS VAK
Sbjct: 1122 RTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPVAK 1181

Query: 181  LNTVRV-LSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFGQ 230
            LNTVRV LSVAVNKDWPLYQLDVKNAFLNGDL EEVYMSPPPGFEAQFGQ
Sbjct: 1182 LNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQFGQ 1231

BLAST of Cmc12g0324081 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 174.9 bits (442), Expect = 7.6e-44
Identity = 80/168 (47.62%), Postives = 115/168 (68.45%), Query Frame = 0

Query: 62  SCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNN 121
           S T H IS ++SYE +SP + +F   +     P   + A E   W  A+ +E+  +E  +
Sbjct: 54  SLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTH 113

Query: 122 TWEICALPKGHKPVGCKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKL 181
           TWEIC LP   KP+GCKWV+ +KY +DGT++R+KARLVAKG+TQ  G+D+ ETFS V KL
Sbjct: 114 TWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKL 173

Query: 182 NTVR-VLSVAVNKDWPLYQLDVKNAFLNGDLAEEVYMSPPPGFEAQFG 229
            +V+ +L+++   ++ L+QLD+ NAFLNGDL EE+YM  PPG+ A+ G
Sbjct: 174 TSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

BLAST of Cmc12g0324081 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0

Query: 77  LSPQFRAFTASLDSTTIPKNIHIALEGPEWKNAVMEEMKTLEKNNTWEICALPKGHKPVG 136
           L+P++ + T +      PK++  AL+ P W  A+ EE+  L +N TW +   P     +G
Sbjct: 12  LNPKY-SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILG 71

Query: 137 CKWVFTLKYKADGTLDRHKARLVAKGFTQTYGVDYSETFSSVAKLNTVR-VLSVA 191
           CKWVF  K  +DGTLDR KARLVAKGF Q  G+ + ET+S V +  T+R +L+VA
Sbjct: 72  CKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035625.15.7e-12698.69Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0054163.12.0e-11591.27Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa][more]
KAA0055577.13.8e-11490.39Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
KAA0031941.18.8e-11186.96Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0048203.18.8e-11186.96Beta-galactosidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q94HW24.1e-3448.95Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.9e-3246.85Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109781.6e-3050.74Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.5e-2535.50Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925202.8e-1943.48Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7T2E92.8e-12698.69Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UDS79.8e-11691.27Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3BQ911.9e-11490.39Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5A7VLQ74.3e-11186.96Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0... [more]
A0A5A7SM644.3e-11186.96Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0... [more]
Match NameE-valueIdentityDescription
AT4G23160.17.6e-4447.62cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.12.0e-2043.48Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 120..225
e-value: 5.8E-35
score: 121.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..44
NoneNo IPR availablePANTHERPTHR11439:SF351CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 112..225
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 112..225
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 119..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0324081.1Cmc12g0324081.1mRNA