Cmc12g0323991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0323991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reticulon-like protein
Location	CMiso1.1chr12: 13333299 .. 13336032 (+)
RNA-Seq Expression	Cmc12g0323991
Synteny	Cmc12g0323991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGACAACAACTCAATCACGAGCTAAAGAGAGCAAAAACGAAGCAAAACATCAAACTTGCAAGTTTGCCCCTGTTGGCGTCGCCTACAGTGTCACAGCGCCAAAACCTAAGAGCTCTATTTTCGTGCAGCACCGCGACGCCCAACTCAGCACTACAGCTCCTCTTCGAGCATCATGGTGCCGATGACGGTTAGCCCATTGCCCAATTGTAGCATCGCAACACTACAAACTTTTGTGTGCACATCTTCACGCACCTCTGCACGCATTTGCCTGGCAAAAGTGTATAAATCCCTCATCTATTTGTGTTTCTTCGTAATTCATCCCACTTTAATCCTTAATAGTTAGTGTATTCTCTTGTAAATTTTCTCCAAATTCATAAATAAAATTTCTTTCATCATTTTATTGAAGATACCTTTGGTGTTTATCTTTCTTCTTGGTGCTACTAAAAGATCGATGAAAAACTAAAGATACTTCTCAATAGATTTTAGTTTAATCTTTCTTGAGACTTTTAAGTTTTAATTGCATATTAATTTCAATCTTAGAATTGAATTCCAATCTTGAATTTATGAGTTTTGTCTAAATAATTTGATCAATCACGAGAGCATGAATCTTTGTTCAATTTCTAATGGCACTAAGCGTAGTTTTTGAATCAAAAGATTGATAATGGGTGATTCTTAAGTTAATTTTAAGCATGCCTTTTTCTTTTAATCTTTTCATGCATAGTCTAATTTGAATTCAATTAATTAATCATTCTCAAGATAGAAGTTTTTCTTACTTTTGAATGTCACAACGATGAAGCCTTAAAACTTAAAGCAAATTTAACAAATGCATGAAAACCGCTAGGTTGAAAATGCACTTAATAAATTTAATAGGAATTAGGGGTGAACATGATAGATCGAAAAACTGAGTTGACCGACTAAAACCAACCTAATTGAAGGAGATCTGTTGGACATAATGAGAGGTTCAATTGGTGTCAATTTGGGAAAAAATCCAAATAGATAACAATTTTTAAAAAGTTCAAAGGCTTAAACTAATAAAAACCGACCGATCAAACTATAATTGATCAGTTCACTAGAAGAAATATGACCTATAATGTCGGTTGAAAAAAATGAACACGGATCTTTAATGTCGGTTTTTAAAATACGGATCTTTAATGTCGGTTTTAAACCGACATCAAAGATGAAGCTTTAATGTCGGTTTAAAACCGACATTAAAGACTCCATCTTTTACAAACCGACATTAAAGGTACATTCTAAACCTATATCCAAACACCCCACAAACTATCCCATCAAACCTAACTCCCAATAACCCCTACATATAAATGCCTTCTTTAGGGTTTTTTTCAAGCTCATACACTCTCAAACTCCTCATTATCATTTTCATTGTAGCTTCTTCAATAACACTAATCATGGCTGAATGAGGAGGAGATCGTGGCGGCTTTGGCAGAGGCTTCGGTGACAGAGGTCGTAGTAGCGATCGTGGCTGGATGATATGAAGCTTTAATTTAAGTGTTTTCTGACATGGGTTTGCCTGATTCGTTGATATTCTTTTCATTTATCTGTTTGTTTCCCTTTTTGGTATTTGAATTGCGACTTTGACTGGTTGAAACTTGAAGTTTTTGTTACCTTTTTGCTTTGGGAATCGGATTCTACATTGGCTATTTTCCCAGTTTTATTACAAATTTCTTGAGTGGTTTTCATGTTTCTTCTTTGTGTCTTATAAGGAAAAATTAAAAACAATGATGATATTCCCCTTTCTAGTTTGATAATCAAGAATTTTGACCCTTTGTTCTTTTGCATAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTTGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGTACGGTTATGGCTGACTTATGTTTTGATTCACTCTGAAGTTCTTGCATATCGCAGTCTTTTACAGATTACTTTTTGCTTATACTACTTCGTTCTTCCAGCAGATAATTTGTTTTCCTTGTTAGCTTTTCTTCATTTTCTCTCTTTATGCAGGCAACTTCAAACATTACCGCAGCTGGTACTGTCAGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCCCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGGTTAGTATTTGAAGCAACATTGAATGCGTGAATTATCATACGTGTGATGCATACTGGATTCGTAGTCCTAATATCCCATATTATTGGAACTTGAATTAAATGGCCAAAACTGATCAAGTATTTATTGGGTTTAAGTACTTTTCCTCTGGAAATAATAGATTTAAGATATCCAATATAATATACGCCTTCGATGATGCCATTTGGATGAGGCAACCATGAGTGGCTCAAGCCTCAGGTAGTGAATGTTTTACAGGACAGTTTCAAGAACGCATGAACTTAATATTCACTTCAAGAGTATAATGTTGACTTGCTACTTCTTTTGTTTTTGGCTGCAATAATTTGATTAACCTTGCAAACACCTTTTGCAGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGTATGTATCACTTGCATTGA

mRNA sequence

AGGGACAACAACTCAATCACGAGCTAAAGAGAGCAAAAACGAAGCAAAACATCAAACTTGCAAGTTTGCCCCTGTTGGCGTCGCCTACAGTGTCACAGCGCCAAAACCTAAGAGCTCTATTTTCGTGCAGCACCGCGACGCCCAACTCAGCACTACAGCTCCTCTTCGAGCATCATGGTGCCGATGACGGTTAGCCCATTGCCCAATTGTAGCATCGCAACACTACAAACTTTTGTGTGCACATCTTCACGCACCTCTGCACGCATTTGCCTGGCAAAAGTCTTCTTCAATAACACTAATCATGGCTGAATGAGGAGGAGATCGTGGCGGCTTTGGCAGAGGCTTCGGTGACAGAGGTCGTAGTAGCGATCGTGGCTGGATGATATGAAGCTTTAATTTAAGTGTTTTCTGACATGGGTTTGCCTGATTCGTTGATATTCTTTTCATTTATCTCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTTGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAGCTGGTACTGTCAGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCCCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGTATGTATCACTTGCATTGA

Coding sequence (CDS)

ATGGGTTTGCCTGATTCGTTGATATTCTTTTCATTTATCTCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTTGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAGCTGGTACTGTCAGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCCCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGTATGTATCACTTGCATTGA

Protein sequence

MGLPDSLIFFSFISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGMYHLH

Homology

[Close]

BLAST of Cmc12g0323991 vs. NCBI nr
Match: XP_008467064.1 (PREDICTED: reticulon-like protein B16 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 5.9e-63
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 10  FSFISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA 69
           F  I+ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA
Sbjct: 24  FFCIAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA 83

Query: 70  AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL 129
           AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL
Sbjct: 84  AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL 143

Query: 130 SVVGSYVSFFTFAYIG 146
           SVVGSYVSFFTFAYIG
Sbjct: 144 SVVGSYVSFFTFAYIG 159

[Close]

BLAST of Cmc12g0323991 vs. NCBI nr
Match: XP_008456773.1 (PREDICTED: reticulon-like protein B16 [Cucumis melo] >KAA0052008.1 reticulon-like protein B16 [Cucumis melo var. makuwa] >TYK04551.1 reticulon-like protein B16 [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 8.5e-62
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRANYAAFRN
Sbjct: 39  AADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG
Sbjct: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAYIG
Sbjct: 159 SYVSFFTFAYIG 170

[Close]

BLAST of Cmc12g0323991 vs. NCBI nr
Match: XP_004138395.1 (reticulon-like protein B16 isoform X1 [Cucumis sativus] >KGN45832.1 hypothetical protein Csa_004771 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 7.9e-60
Identity = 124/132 (93.94%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQWHVS G++VVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRAN+AAFRN
Sbjct: 39  AADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDIT+GNDFKLFFRMVIGLWLLSVVG
Sbjct: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAY+G
Sbjct: 159 SYVSFFTFAYVG 170

[Close]

BLAST of Cmc12g0323991 vs. NCBI nr
Match: XP_038885563.1 (reticulon-like protein B16 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 9.7e-58
Identity = 123/132 (93.18%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQ HVSFGI+VV+TVFWLLIE+SGLPLLTTC DVLLILVVLLFLRANYAAFRN
Sbjct: 39  AADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQL LSEEFVNNVAASLRAKINNTLLMAH+ITLGNDFKLFFRMVIGLWLLSV+G
Sbjct: 99  KQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAYIG
Sbjct: 159 SYVSFFTFAYIG 170

[Close]

BLAST of Cmc12g0323991 vs. NCBI nr
Match: XP_023549733.1 (reticulon-like protein B16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54
Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQ HVSFGI+VV+TVFWLLIEHSGLPLLTTC DVLL+LVVLLFLRAN+AAFR 
Sbjct: 38  AADILLWKQRHVSFGIVVVATVFWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRK 97

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFV+NVAAS RAKINN LL+AHDITLGNDFKLFFRMVI LWLLSV+G
Sbjct: 98  KQLQTLPQLVLSEEFVDNVAASFRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLG 157

Query: 134 SYVSFFTFAYIG 146
           SY+SFFTFAYIG
Sbjct: 158 SYLSFFTFAYIG 169

[Close]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.2e-38
Identity = 77/132 (58.33%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A  +AFRN
Sbjct: 41  AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 100

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           +QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF++VI LWLLS +G
Sbjct: 101 RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 160

Query: 134 SYVSFFTFAYIG 146
           SY+S  T  YIG
Sbjct: 161 SYISLCTLLYIG 172

[Close]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.2e-15
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 13  ISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFR 72
           + AD+ LW+   +S  ++ V+T  W+L E      L+    +L+  +  LFL +N  AF 
Sbjct: 67  LPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFM 126

Query: 73  NKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVV 132
           NK    +P++ + EE    + ++LR ++N   ++   I LG D K F  +V GLW++SVV
Sbjct: 127 NKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVV 186

Query: 133 GSYVSFFTFAYIGMYHLH 151
           G++ +F T  YI    LH
Sbjct: 187 GNWFNFLTLVYICFVVLH 204

[Close]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot
Match: Q6NPD8 (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 15  ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRNK 74
           AD+++WK     F ++  +T+ W L E  G       ++  L+ VV+LFL A  A   N+
Sbjct: 15  ADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNR 74

Query: 75  QLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGS 134
            +  LP L ++EEFV  VA ++R  IN  L +A +I +G + K  FR+ + LW +S VG+
Sbjct: 75  PMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGN 134

Query: 135 YVSFFTFAYIGM 147
           +++F T  Y+G+
Sbjct: 135 FLNFLTILYLGV 146

[Close]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-14
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 15  ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRNK 74
           AD+LLW+    +  +++ ST FW L E +G  LL+   +VLL+LV + FL A  A   N+
Sbjct: 23  ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 82

Query: 75  QLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGS 134
            L  +P + + EEF N  A  LR  IN  L +A DIT+  +     ++ + LW +S VG+
Sbjct: 83  PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGT 142

Query: 135 YVSFFTFAYIGM 147
            ++  T  YIG+
Sbjct: 143 LINSLTLVYIGV 154

[Close]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.8e-14
Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 15  ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRNK 74
           ADI +WK   +S G+   +TV W+L E     LLT    V+++ + +LFL +N   F +K
Sbjct: 86  ADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHK 145

Query: 75  QLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGS 134
               +P++ + EE +  +A+ LR +IN  +    +I  G D K F   + GLW+LS++G 
Sbjct: 146 SPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGG 205

Query: 135 YVSFFTFAYIGM 147
             SF T AYI +
Sbjct: 206 CYSFLTLAYIAL 217

[Close]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL
Match: A0A1S3CTY4 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103504502 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 10  FSFISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA 69
           F  I+ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA
Sbjct: 24  FFCIAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA 83

Query: 70  AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL 129
           AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL
Sbjct: 84  AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLL 143

Query: 130 SVVGSYVSFFTFAYIG 146
           SVVGSYVSFFTFAYIG
Sbjct: 144 SVVGSYVSFFTFAYIG 159

[Close]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL
Match: A0A5A7U9N4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001790 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.1e-62
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRANYAAFRN
Sbjct: 39  AADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG
Sbjct: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAYIG
Sbjct: 159 SYVSFFTFAYIG 170

[Close]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL
Match: A0A1S3C5B5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.1e-62
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRANYAAFRN
Sbjct: 39  AADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG
Sbjct: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAYIG
Sbjct: 159 SYVSFFTFAYIG 170

[Close]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL
Match: A0A0A0KBS2 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60
Identity = 124/132 (93.94%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQWHVS G++VVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRAN+AAFRN
Sbjct: 39  AADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRN 98

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDIT+GNDFKLFFRMVIGLWLLSVVG
Sbjct: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVG 158

Query: 134 SYVSFFTFAYIG 146
           SYVSFFTFAY+G
Sbjct: 159 SYVSFFTFAYVG 170

[Close]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL
Match: A0A6J1K105 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.3e-55
Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +ADILLWKQ HVSFGI+VV+TVFWLLIEHSGLPLLTTC DVLL+LVVLLFLRAN+AAFR 
Sbjct: 38  AADILLWKQRHVSFGIVVVATVFWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRK 97

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           KQLQTLPQLVLSEEFV+NVAAS RAKINN LL+AHDITLGNDFKLFFRMVI LWLLSV+G
Sbjct: 98  KQLQTLPQLVLSEEFVDNVAASFRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLG 157

Query: 134 SYVSFFTFAYIG 146
           SY+SFFTFAYIG
Sbjct: 158 SYLSFFTFAYIG 169

[Close]

BLAST of Cmc12g0323991 vs. TAIR 10
Match: AT3G10915.3 (Reticulon family protein )

HSP 1 Score: 159.1 bits (401), Expect = 2.8e-39
Identity = 78/139 (56.12%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 7   LIFFSFISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRA 66
           +  F  ++AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A
Sbjct: 1   MALFFDVAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHA 60

Query: 67  NYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGL 126
             +AFRN+QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF++VI L
Sbjct: 61  RVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICL 120

Query: 127 WLLSVVGSYVSFFTFAYIG 146
           WLLS +GSY+S  T  YIG
Sbjct: 121 WLLSAIGSYISLCTLLYIG 139

[Close]

BLAST of Cmc12g0323991 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-39
Identity = 77/132 (58.33%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A  +AFRN
Sbjct: 41  AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 100

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           +QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF++VI LWLLS +G
Sbjct: 101 RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 160

Query: 134 SYVSFFTFAYIG 146
           SY+S  T  YIG
Sbjct: 161 SYISLCTLLYIG 172

[Close]

BLAST of Cmc12g0323991 vs. TAIR 10
Match: AT3G10915.6 (Reticulon family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-39
Identity = 77/132 (58.33%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A  +AFRN
Sbjct: 9   AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 68

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 133
           +QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF++VI LWLLS +G
Sbjct: 69  RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 128

Query: 134 SYVSFFTFAYIG 146
           SY+S  T  YIG
Sbjct: 129 SYISLCTLLYIG 140

[Close]

BLAST of Cmc12g0323991 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 157.5 bits (397), Expect = 8.2e-39
Identity = 79/137 (57.66%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 10  FSFISADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYA 69
           + FI+AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A  +
Sbjct: 59  WQFIAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVS 118

Query: 70  AFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFR-MVIGLWL 129
           AFRN+QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF+ +VI LWL
Sbjct: 119 AFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWL 178

Query: 130 LSVVGSYVSFFTFAYIG 146
           LS +GSY+S  T  YIG
Sbjct: 179 LSAIGSYISLCTLLYIG 195

[Close]

BLAST of Cmc12g0323991 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 154.1 bits (388), Expect = 9.1e-38
Identity = 77/133 (57.89%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 14  SADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 73
           +AD+LLW++ H+S G+I++STV WL+ E SGLP L+   DVLLI++++ F+ A  +AFRN
Sbjct: 41  AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 100

Query: 74  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFR-MVIGLWLLSVV 133
           +QL +LP+LVLSEE VN+ AAS R K+N+ L+MAHD+T+GNDF+LFF+ +VI LWLLS +
Sbjct: 101 RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAI 160

Query: 134 GSYVSFFTFAYIG 146
           GSY+S  T  YIG
Sbjct: 161 GSYISLCTLLYIG 173

The following BLAST results are available for this feature:

BLAST of Cmc12g0323991 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467064.1	5.9e-63	97.79	PREDICTED: reticulon-like protein B16 [Cucumis melo]	[more]
XP_008456773.1	8.5e-62	98.48	PREDICTED: reticulon-like protein B16 [Cucumis melo] >KAA0052008.1 reticulon-lik...	[more]
XP_004138395.1	7.9e-60	93.94	reticulon-like protein B16 isoform X1 [Cucumis sativus] >KGN45832.1 hypothetical...	[more]
XP_038885563.1	9.7e-58	93.18	reticulon-like protein B16 [Benincasa hispida]	[more]
XP_023549733.1	1.3e-54	88.64	reticulon-like protein B16 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc12g0323991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH6	5.2e-38	58.33	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q6DBN4	6.2e-15	33.33	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q6NPD8	1.1e-14	35.61	Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1	[more]
Q9LT71	3.1e-14	37.12	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q9SUT9	6.8e-14	35.61	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]

BLAST of Cmc12g0323991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CTY4	2.8e-63	97.79	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103504502 PE=4 SV=1	[more]
A0A5A7U9N4	4.1e-62	98.48	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3C5B5	4.1e-62	98.48	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1	[more]
A0A0A0KBS2	3.8e-60	93.94	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1	[more]
A0A6J1K105	6.3e-55	88.64	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1	[more]

BLAST of Cmc12g0323991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10915.3	2.8e-39	56.12	Reticulon family protein	[more]
AT3G10915.2	3.7e-39	58.33	Reticulon family protein	[more]
AT3G10915.6	3.7e-39	58.33	Reticulon family protein	[more]
AT3G10915.5	8.2e-39	57.66	Reticulon family protein	[more]
AT3G10915.4	9.1e-38	57.89	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 15..147 e-value: 1.6E-33 score: 115.9
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 14..150 score: 19.712986
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 14..146
None	No IPR available	PANTHER	PTHR10994:SF67	RETICULON-LIKE PROTEIN B16	coord: 14..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0323991.1	Cmc12g0323991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium