Cmc12g0323871 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0323871
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
LocationCMiso1.1chr12: 13031158 .. 13031613 (+)
RNA-Seq ExpressionCmc12g0323871
SyntenyCmc12g0323871
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACATTGTTTTGACTGAAAATGATCAAACAGAAATCAGTCAACTAAAACAGAGAATGGGTGATGAATTTGAAATCAAGGATTTAGGAAATTTGAAATATTTCCTTGGAATTGAGGTGTCTAGATCTAAAAAAGGTATCTTCGTGTCTCAGGGAAAATACACCCTTGATCTGCTAACCGAGACAAGTATGTTGGGATGTCATCTTGCTGATACTTCTATTGAATTCAACTGTAAACTAGAAAACTCTGATGATCAAGCTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAACTTAATTTACTTATCCCATACTCGTCTTGATATTTCCTTTGCTGTGAGTGTTGTTAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAAGAGAATCCTGAGATACTTGAAAAATACACCTCGTAAAGGGTTTGATGTTTAG

mRNA sequence

ATGGATGACATTGTTTTGACTGAAAATGATCAAACAGAAATCAGTCAACTAAAACAGAGAATGGGTGATGAATTTGAAATCAAGGATTTAGGAAATTTGAAATATTTCCTTGGAATTGAGGTGTCTAGATCTAAAAAAGGTATCTTCGTGTCTCAGGGAAAATACACCCTTGATCTGCTAACCGAGACAAGTATGTTGGGATGTCATCTTGCTGATACTTCTATTGAATTCAACTGTAAACTAGAAAACTCTGATGATCAAGCTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAACTTAATTTACTTATCCCATACTCGTCTTGATATTTCCTTTGCTGTGAGTGTTGTTAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAAGAGAATCCTGAGATACTTGAAAAATACACCTCGTAAAGGGTTTGATGTTTAG

Coding sequence (CDS)

ATGGATGACATTGTTTTGACTGAAAATGATCAAACAGAAATCAGTCAACTAAAACAGAGAATGGGTGATGAATTTGAAATCAAGGATTTAGGAAATTTGAAATATTTCCTTGGAATTGAGGTGTCTAGATCTAAAAAAGGTATCTTCGTGTCTCAGGGAAAATACACCCTTGATCTGCTAACCGAGACAAGTATGTTGGGATGTCATCTTGCTGATACTTCTATTGAATTCAACTGTAAACTAGAAAACTCTGATGATCAAGCTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAACTTAATTTACTTATCCCATACTCGTCTTGATATTTCCTTTGCTGTGAGTGTTGTTAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAAGAGAATCCTGAGATACTTGAAAAATACACCTCGTAAAGGGTTTGATGTTTAG

Protein sequence

MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRILRYLKNTPRKGFDV
Homology
BLAST of Cmc12g0323871 vs. NCBI nr
Match: KAA0035576.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK30960.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 19  QRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN 78
           +RMGDEFEIKDLGNLKYFLG+EVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN
Sbjct: 422 KRMGDEFEIKDLGNLKYFLGMEVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN 481

Query: 79  CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL 138
           CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL
Sbjct: 482 CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL 541

Query: 139 RYLKNTPRKGFDV 152
           RYLKNTPRKGFDV
Sbjct: 542 RYLKNTPRKGFDV 554

BLAST of Cmc12g0323871 vs. NCBI nr
Match: KAA0048527.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK GIFVSQ KYTLDLL
Sbjct: 975  VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKYGIFVSQRKYTLDLL 1034

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1035 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1094

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1095 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1122

BLAST of Cmc12g0323871 vs. NCBI nr
Match: KAA0067540.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1219 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1278

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGCH ADT IEFNCKL NSDDQ PVDKEQY RLVG LIYLSHTR DISFAVSVVS
Sbjct: 1279 TETGMLGCHPADTPIEFNCKLGNSDDQVPVDKEQYHRLVGKLIYLSHTRPDISFAVSVVS 1338

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1339 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1366

BLAST of Cmc12g0323871 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 4.1e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1436

BLAST of Cmc12g0323871 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 4.1e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1263 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1322

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1323 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1382

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1383 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1410

BLAST of Cmc12g0323871 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDI++T ND T +      +   F +KD   L YFLGIE  R   G+ +SQ +Y LDLL
Sbjct: 1151 VDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLL 1210

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
              T+M+      T +  + KL         D  +Y+ +VG+L YL+ TR DIS+AV+ +S
Sbjct: 1211 ARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLS 1270

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFM  P E+H++A+KRILRYL  TP  G
Sbjct: 1271 QFMHMPTEEHLQALKRILRYLAGTPNHG 1298

BLAST of Cmc12g0323871 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDI++T ND   +      +   F +K+  +L YFLGIE  R  +G+ +SQ +YTLDLL
Sbjct: 1134 VDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLL 1193

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
              T+ML      T +  + KL         D  +Y+ +VG+L YL+ TR D+S+AV+ +S
Sbjct: 1194 ARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLS 1253

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            Q+M  P + H  A+KR+LRYL  TP  G
Sbjct: 1254 QYMHMPTDDHWNALKRVLRYLAGTPDHG 1281

BLAST of Cmc12g0323871 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 0

Query: 1   MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
           +DDI+LT +  T ++ L  ++   F +KDLG + YFLGI++     G+F+SQ KY   +L
Sbjct: 7   VDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQIL 66

Query: 61  TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
               ML C    T +        S  + P D   ++ +VG L YL+ TR DIS+AV++V 
Sbjct: 67  NNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVC 126

Query: 121 QFMQAPYEKHMEAVKRILRYLKNT 145
           Q M  P     + +KR+LRY+K T
Sbjct: 127 QRMHEPTLADFDLLKRVLRYVKGT 149

BLAST of Cmc12g0323871 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14
Identity = 51/153 (33.33%), Postives = 88/153 (57.52%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEV--SRSKKGIFVSQGKYTLD 60
            +DD+++   D+  I++LK  +   F++KDLG  +  LG+++   R+ + +++SQ KY   
Sbjct: 1009 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1068

Query: 61   LLTETSMLGCHLADTSIEFNCKLENS------DDQAPVDKEQYQRLVGNLIY-LSHTRLD 120
            +L   +M       T +  + KL         +++  + K  Y   VG+L+Y +  TR D
Sbjct: 1069 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128

Query: 121  ISFAVSVVSQFMQAPYEKHMEAVKRILRYLKNT 145
            I+ AV VVS+F++ P ++H EAVK ILRYL+ T
Sbjct: 1129 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGT 1161

BLAST of Cmc12g0323871 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 0

Query: 1   MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKG-IFVSQGKYTLDL 60
           +DD+++         ++KQ +   + +KDLG +  FLG+ + +S  G I +S   Y    
Sbjct: 88  VDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKA 147

Query: 61  LTETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHT-RLDISFAVSV 120
            +E+ +    L  T +  +  L  +      D   YQ +VG L++ ++T R DIS+ VS+
Sbjct: 148 ASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSL 207

Query: 121 VSQFMQAPYEKHMEAVKRILRYLKNT 145
           +S+F++ P   H+E+ +R+LRYL  T
Sbjct: 208 LSRFLREPRAIHLESARRVLRYLYTT 233

BLAST of Cmc12g0323871 vs. ExPASy TrEMBL
Match: A0A5D3E5R3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001860 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 19  QRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN 78
           +RMGDEFEIKDLGNLKYFLG+EVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN
Sbjct: 422 KRMGDEFEIKDLGNLKYFLGMEVSRSKKGIFVSQGKYTLDLLTETSMLGCHLADTSIEFN 481

Query: 79  CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL 138
           CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL
Sbjct: 482 CKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVSQFMQAPYEKHMEAVKRIL 541

Query: 139 RYLKNTPRKGFDV 152
           RYLKNTPRKGFDV
Sbjct: 542 RYLKNTPRKGFDV 554

BLAST of Cmc12g0323871 vs. ExPASy TrEMBL
Match: A0A5A7U2P7 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001490 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.2e-65
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK GIFVSQ KYTLDLL
Sbjct: 975  VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKYGIFVSQRKYTLDLL 1034

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1035 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1094

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1095 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1122

BLAST of Cmc12g0323871 vs. ExPASy TrEMBL
Match: A0A5A7VK49 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00640 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.9e-65
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1219 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1278

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGCH ADT IEFNCKL NSDDQ PVDKEQY RLVG LIYLSHTR DISFAVSVVS
Sbjct: 1279 TETGMLGCHPADTPIEFNCKLGNSDDQVPVDKEQYHRLVGKLIYLSHTRPDISFAVSVVS 1338

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1339 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1366

BLAST of Cmc12g0323871 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1436

BLAST of Cmc12g0323871 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1    MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
            +DDIVLT +DQTEISQLKQRMGDEFEIKDLGNLKYFLG+EV+RSK+GI VSQ KYTLDLL
Sbjct: 1289 VDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLL 1348

Query: 61   TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            TET MLGC  ADT IEFNCKL NSDDQ PVDKEQYQRLVG LIYLSHTR DISFAVSVVS
Sbjct: 1349 TETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVS 1408

Query: 121  QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
            QFMQAPYEKHMEAV RILRYLKNTP KG
Sbjct: 1409 QFMQAPYEKHMEAVNRILRYLKNTPGKG 1436

BLAST of Cmc12g0323871 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-30
Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 0

Query: 1   MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
           +DDI++  N+   + +LK ++   F+++DLG LKYFLG+E++RS  GI + Q KY LDLL
Sbjct: 284 VDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLL 343

Query: 61  TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
            ET +LGC  +   ++ +           VD + Y+RL+G L+YL  TRLDISFAV+ +S
Sbjct: 344 DETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 403

Query: 121 QFMQAPYEKHMEAVKRILRYLKNTPRKG 149
           QF +AP   H +AV +IL Y+K T  +G
Sbjct: 404 QFSEAPRLAHQQAVMKILHYIKGTVGQG 431

BLAST of Cmc12g0323871 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 0

Query: 1   MDDIVLTENDQTEISQLKQRMGDEFEIKDLGNLKYFLGIEVSRSKKGIFVSQGKYTLDLL 60
           +DDI+LT +  T ++ L  ++   F +KDLG + YFLGI++     G+F+SQ KY   +L
Sbjct: 7   VDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQIL 66

Query: 61  TETSMLGCHLADTSIEFNCKLENSDDQAPVDKEQYQRLVGNLIYLSHTRLDISFAVSVVS 120
               ML C    T +        S  + P D   ++ +VG L YL+ TR DIS+AV++V 
Sbjct: 67  NNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVC 126

Query: 121 QFMQAPYEKHMEAVKRILRYLKNT 145
           Q M  P     + +KR+LRY+K T
Sbjct: 127 QRMHEPTLADFDLLKRVLRYVKGT 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035576.14.0e-6798.50reverse transcriptase [Cucumis melo var. makuwa] >TYK30960.1 reverse transcripta... [more]
KAA0048527.11.1e-6488.51transportin-3 isoform X1 [Cucumis melo var. makuwa][more]
KAA0067540.11.8e-6487.84Beta-galactosidase [Cucumis melo var. makuwa][more]
TYJ99952.14.1e-6487.84Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu... [more]
KAA0031941.14.1e-6487.84Beta-galactosidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q94HW21.7e-2542.57Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.6e-2339.86Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925191.4e-1937.50Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109782.4e-1433.33Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P256002.4e-1130.14Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5D3E5R31.9e-6798.50Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A5A7U2P75.2e-6588.51Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5A7VK498.9e-6587.84Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00... [more]
A0A5D3BJK72.0e-6487.84Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0... [more]
A0A5D3C4T42.0e-6487.84Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.4e-3043.92cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.0e-2037.50DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..73
e-value: 4.9E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 23..145
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 23..145
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0323871.1Cmc12g0323871.1mRNA