Homology
BLAST of Cmc12g0323261 vs. NCBI nr
Match:
KAA0035460.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140
Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTV AALTDEHW
Sbjct: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVAAALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILAIQE+LLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI
Sbjct: 61 ILAIQEELLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
+GLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD
Sbjct: 121 KGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI
Sbjct: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
Query: 241 YINDIIFGETSS 253
YINDIIFGETS+
Sbjct: 241 YINDIIFGETSN 252
BLAST of Cmc12g0323261 vs. NCBI nr
Match:
TYK31065.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140
Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTV AALTDEHW
Sbjct: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVAAALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILAIQE+LLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI
Sbjct: 61 ILAIQEELLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
+GLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD
Sbjct: 121 KGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI
Sbjct: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
Query: 241 YINDIIFGETSS 253
YINDIIFGETS+
Sbjct: 241 YINDIIFGETSN 252
BLAST of Cmc12g0323261 vs. NCBI nr
Match:
KAA0059225.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 421.4 bits (1082), Expect = 6.7e-114
Identity = 203/251 (80.88%), Postives = 223/251 (88.84%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
+PPTH KNHP S +I DIHSGI T +KER+DYAKMVANV YTS +EPTTV AAL+DEHW
Sbjct: 942 IPPTHTAKNHPSSFIIRDIHSGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHW 1001
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
IL IQE+LLQFERNQVW LVPKPP+ NIIGTKWIFKNK DE+GR+IRNK RLVAQGYSQI
Sbjct: 1002 ILTIQEELLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQI 1061
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
EGLDFGETFAP ARLEAIRL+LS+ CF FKLFQMDVKS FLNGYL EEVYVAQPKGFVD
Sbjct: 1062 EGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVD 1121
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
VH DHVYKLRKALY LKQAPRAWYERLSTYL+QQGY++GSADQ MF+YRQ + FLIVQI
Sbjct: 1122 PVHEDHVYKLRKALYRLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTNFLIVQI 1181
Query: 241 YINDIIFGETS 252
Y++ IIFG+TS
Sbjct: 1182 YVDGIIFGDTS 1192
BLAST of Cmc12g0323261 vs. NCBI nr
Match:
KAA0043008.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 417.9 bits (1073), Expect = 7.4e-113
Identity = 209/291 (71.82%), Postives = 234/291 (80.41%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
+PPTH+ KNHP S + GDIHSGI T +KER+DYAKMVANV YTS++EPTTV A L+DEHW
Sbjct: 144 IPPTHIAKNHPSSFINGDIHSGIITRKKERKDYAKMVANVCYTSSLEPTTVSAVLSDEHW 203
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILA+QE+LLQFERNQVW LVPKPP+ NIIGTKWIFKNK DE+
Sbjct: 204 ILAMQEELLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEE------------------ 263
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
ARLEAIRL+LS+TCFR FKLFQMDVKS FLNGYLSEEVYVAQPKGFVD
Sbjct: 264 -----------VARLEAIRLLLSYTCFRRFKLFQMDVKSAFLNGYLSEEVYVAQPKGFVD 323
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
H DHVYKLRKALY LKQAPRAWYERLSTYL+QQ Y +GSADQ MF+YRQ ++FLIVQI
Sbjct: 324 PTHQDHVYKLRKALYRLKQAPRAWYERLSTYLLQQEYHRGSADQTMFIYRQGTDFLIVQI 383
Query: 241 YINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDICF 292
Y++DIIFG TSS YVE+FV+QMKGEF+MSMVGELTFFLGFQI QE+T I F
Sbjct: 384 YVDDIIFGGTSSVYVEQFVAQMKGEFKMSMVGELTFFLGFQINQENTGIFF 405
BLAST of Cmc12g0323261 vs. NCBI nr
Match:
KAA0063048.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 389.0 bits (998), Expect = 3.7e-104
Identity = 201/291 (69.07%), Postives = 223/291 (76.63%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTH+ KNH S++IGDI SGITT +KE RDYAKMV NV YTST+E TTV ALTDEHW
Sbjct: 1 MPPTHIAKNHLSSTIIGDIQSGITTRKKEMRDYAKMVVNVCYTSTLELTTVTVALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILA+QE+LLQFERN QGYSQI
Sbjct: 61 ILAMQEELLQFERN----------------------------------------QGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
EGLDFGETFA +RL+ IRL++S+ CFR FKLFQMDVKS FLNGYLS EVYV QPKGFVD
Sbjct: 121 EGLDFGETFALVSRLKEIRLLMSYACFRRFKLFQMDVKSAFLNGYLSAEVYVVQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
VHHDHVYKLRKALYGLKQA RAWYERLSTYL+QQGYR+GSADQ MF+YRQ +EFLIVQI
Sbjct: 181 SVHHDHVYKLRKALYGLKQALRAWYERLSTYLLQQGYRRGSADQTMFIYRQGTEFLIVQI 240
Query: 241 YINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDICF 292
Y++DIIFG TSSAYV++FV QMK EFEMSMVGEL+FFLGFQIKQE+T I F
Sbjct: 241 YVDDIIFGGTSSAYVKQFVEQMKEEFEMSMVGELSFFLGFQIKQEETGIFF 251
BLAST of Cmc12g0323261 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 1.5e-47
Identity = 95/244 (38.93%), Postives = 144/244 (59.02%), Query Frame = 0
Query: 47 EPTTVVAALTDEHWILAIQEDLLQFERNQVWNLVPKPP-HVNIIGTKWIFKNKIDEQGRL 106
EP T + AL DE W A+ ++ N W+LVP PP HV I+G +WIF K + G L
Sbjct: 955 EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1014
Query: 107 IRNKTRLVAQGYSQIEGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGY 166
R K RLVA+GY+Q GLD+ ETF+P + +IR++L R + + Q+DV + FL G
Sbjct: 1015 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1074
Query: 167 LSEEVYVAQPKGFVDHVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQK 226
L+++VY++QP GF+D ++V KLRKALYGLKQAPRAWY L YL+ G+ +D
Sbjct: 1075 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1134
Query: 227 MFMYRQDSEFLIVQIYINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQE 286
+F+ ++ + + +Y++DI+ + + + F + EL +FLG + K+
Sbjct: 1135 LFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRV 1194
Query: 287 DTDI 290
T +
Sbjct: 1195 PTGL 1198
BLAST of Cmc12g0323261 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 9.6e-47
Identity = 92/239 (38.49%), Postives = 144/239 (60.25%), Query Frame = 0
Query: 47 EPTTVVAALTDEHWILAIQEDLLQFERNQVWNLV-PKPPHVNIIGTKWIFKNKIDEQGRL 106
EP T + A+ D+ W A+ ++ N W+LV P PP V I+G +WIF K + G L
Sbjct: 938 EPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 997
Query: 107 IRNKTRLVAQGYSQIEGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGY 166
R K RLVA+GY+Q GLD+ ETF+P + +IR++L R + + Q+DV + FL G
Sbjct: 998 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1057
Query: 167 LSEEVYVAQPKGFVDHVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQK 226
L++EVY++QP GFVD D+V +LRKA+YGLKQAPRAWY L TYL+ G+ +D
Sbjct: 1058 LTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTS 1117
Query: 227 MFMYRQDSEFLIVQIYINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQ 285
+F+ ++ + + +Y++DI+ + ++ + + F + +L +FLG + K+
Sbjct: 1118 LFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKR 1176
BLAST of Cmc12g0323261 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 81/232 (34.91%), Postives = 132/232 (56.90%), Query Frame = 0
Query: 60 WILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQ 119
W AI +L + N W + +P + NI+ ++W+F K +E G IR K RLVA+G++Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 120 IEGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFV 179
+D+ ETFAP AR+ + R ILS K+ QMDVK+ FLNG L EE+Y+ P+G
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI- 1025
Query: 180 DHVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQD--SEFLI 239
+ D+V KL KA+YGLKQA R W+E L + + S D+ +++ + +E +
Sbjct: 1026 -SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIY 1085
Query: 240 VQIYINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDI 290
V +Y++D++ + F + +F M+ + E+ F+G +I+ ++ I
Sbjct: 1086 VLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKI 1135
BLAST of Cmc12g0323261 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 81/234 (34.62%), Postives = 132/234 (56.41%), Query Frame = 0
Query: 63 AIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQIEG 122
A+QE++ ++N + LV P + KW+FK K D +L+R K RLV +G+ Q +G
Sbjct: 829 AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 888
Query: 123 LDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVDHV 182
+DF E F+P ++ +IR ILS ++ Q+DVK+ FL+G L EE+Y+ QP+GF
Sbjct: 889 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 948
Query: 183 HHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYR-QDSEFLIVQIY 242
V KL K+LYGLKQAPR WY + +++ Q Y K +D ++ R ++ F+I+ +Y
Sbjct: 949 KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1008
Query: 243 INDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDICFFLGE 296
++D++ + K + F+M +G LG +I +E T +L +
Sbjct: 1009 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQ 1062
BLAST of Cmc12g0323261 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 0
Query: 43 TSTMEPTTVVAALTDEHWILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQ 102
T EP +V+ AL D W A+QE+L RN+ W LVP P + NI+G KW+FK K+
Sbjct: 23 TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82
Query: 103 GRLIRNKTRLVAQGYSQIEGLDFGETFAPTARLEAIRLILS 144
G L R K RLVA+G+ Q EG+ F ET++P R IR IL+
Sbjct: 83 GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123
BLAST of Cmc12g0323261 vs. ExPASy TrEMBL
Match:
A0A5A7SWP6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001070 PE=4 SV=1)
HSP 1 Score: 510.0 bits (1312), Expect = 6.9e-141
Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTV AALTDEHW
Sbjct: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVAAALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILAIQE+LLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI
Sbjct: 61 ILAIQEELLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
+GLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD
Sbjct: 121 KGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI
Sbjct: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
Query: 241 YINDIIFGETSS 253
YINDIIFGETS+
Sbjct: 241 YINDIIFGETSN 252
BLAST of Cmc12g0323261 vs. ExPASy TrEMBL
Match:
A0A5D3E6X3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003230 PE=4 SV=1)
HSP 1 Score: 510.0 bits (1312), Expect = 6.9e-141
Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTV AALTDEHW
Sbjct: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVAAALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILAIQE+LLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI
Sbjct: 61 ILAIQEELLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
+GLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD
Sbjct: 121 KGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI
Sbjct: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
Query: 241 YINDIIFGETSS 253
YINDIIFGETS+
Sbjct: 241 YINDIIFGETSN 252
BLAST of Cmc12g0323261 vs. ExPASy TrEMBL
Match:
A0A5A7V046 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001550 PE=4 SV=1)
HSP 1 Score: 421.4 bits (1082), Expect = 3.2e-114
Identity = 203/251 (80.88%), Postives = 223/251 (88.84%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
+PPTH KNHP S +I DIHSGI T +KER+DYAKMVANV YTS +EPTTV AAL+DEHW
Sbjct: 942 IPPTHTAKNHPSSFIIRDIHSGIITRKKERKDYAKMVANVCYTSLLEPTTVSAALSDEHW 1001
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
IL IQE+LLQFERNQVW LVPKPP+ NIIGTKWIFKNK DE+GR+IRNK RLVAQGYSQI
Sbjct: 1002 ILTIQEELLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEEGRVIRNKARLVAQGYSQI 1061
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
EGLDFGETFAP ARLEAIRL+LS+ CF FKLFQMDVKS FLNGYL EEVYVAQPKGFVD
Sbjct: 1062 EGLDFGETFAPVARLEAIRLLLSYACFWRFKLFQMDVKSAFLNGYLCEEVYVAQPKGFVD 1121
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
VH DHVYKLRKALY LKQAPRAWYERLSTYL+QQGY++GSADQ MF+YRQ + FLIVQI
Sbjct: 1122 PVHEDHVYKLRKALYRLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTNFLIVQI 1181
Query: 241 YINDIIFGETS 252
Y++ IIFG+TS
Sbjct: 1182 YVDGIIFGDTS 1192
BLAST of Cmc12g0323261 vs. ExPASy TrEMBL
Match:
A0A5A7TJM5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00830 PE=4 SV=1)
HSP 1 Score: 417.9 bits (1073), Expect = 3.6e-113
Identity = 209/291 (71.82%), Postives = 234/291 (80.41%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
+PPTH+ KNHP S + GDIHSGI T +KER+DYAKMVANV YTS++EPTTV A L+DEHW
Sbjct: 144 IPPTHIAKNHPSSFINGDIHSGIITRKKERKDYAKMVANVCYTSSLEPTTVSAVLSDEHW 203
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILA+QE+LLQFERNQVW LVPKPP+ NIIGTKWIFKNK DE+
Sbjct: 204 ILAMQEELLQFERNQVWELVPKPPYANIIGTKWIFKNKTDEE------------------ 263
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
ARLEAIRL+LS+TCFR FKLFQMDVKS FLNGYLSEEVYVAQPKGFVD
Sbjct: 264 -----------VARLEAIRLLLSYTCFRRFKLFQMDVKSAFLNGYLSEEVYVAQPKGFVD 323
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
H DHVYKLRKALY LKQAPRAWYERLSTYL+QQ Y +GSADQ MF+YRQ ++FLIVQI
Sbjct: 324 PTHQDHVYKLRKALYRLKQAPRAWYERLSTYLLQQEYHRGSADQTMFIYRQGTDFLIVQI 383
Query: 241 YINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDICF 292
Y++DIIFG TSS YVE+FV+QMKGEF+MSMVGELTFFLGFQI QE+T I F
Sbjct: 384 YVDDIIFGGTSSVYVEQFVAQMKGEFKMSMVGELTFFLGFQINQENTGIFF 405
BLAST of Cmc12g0323261 vs. ExPASy TrEMBL
Match:
A0A5A7V603 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001610 PE=4 SV=1)
HSP 1 Score: 389.0 bits (998), Expect = 1.8e-104
Identity = 201/291 (69.07%), Postives = 223/291 (76.63%), Query Frame = 0
Query: 1 MPPTHVVKNHPPSSLIGDIHSGITTGRKERRDYAKMVANVYYTSTMEPTTVVAALTDEHW 60
MPPTH+ KNH S++IGDI SGITT +KE RDYAKMV NV YTST+E TTV ALTDEHW
Sbjct: 1 MPPTHIAKNHLSSTIIGDIQSGITTRKKEMRDYAKMVVNVCYTSTLELTTVTVALTDEHW 60
Query: 61 ILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLIRNKTRLVAQGYSQI 120
ILA+QE+LLQFERN QGYSQI
Sbjct: 61 ILAMQEELLQFERN----------------------------------------QGYSQI 120
Query: 121 EGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYLSEEVYVAQPKGFVD 180
EGLDFGETFA +RL+ IRL++S+ CFR FKLFQMDVKS FLNGYLS EVYV QPKGFVD
Sbjct: 121 EGLDFGETFALVSRLKEIRLLMSYACFRRFKLFQMDVKSAFLNGYLSAEVYVVQPKGFVD 180
Query: 181 HVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSADQKMFMYRQDSEFLIVQI 240
VHHDHVYKLRKALYGLKQA RAWYERLSTYL+QQGYR+GSADQ MF+YRQ +EFLIVQI
Sbjct: 181 SVHHDHVYKLRKALYGLKQALRAWYERLSTYLLQQGYRRGSADQTMFIYRQGTEFLIVQI 240
Query: 241 YINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQIKQEDTDICF 292
Y++DIIFG TSSAYV++FV QMK EFEMSMVGEL+FFLGFQIKQE+T I F
Sbjct: 241 YVDDIIFGGTSSAYVKQFVEQMKEEFEMSMVGELSFFLGFQIKQEETGIFF 251
BLAST of Cmc12g0323261 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 169.5 bits (428), Expect = 4.3e-42
Identity = 89/247 (36.03%), Postives = 142/247 (57.49%), Query Frame = 0
Query: 47 EPTTVVAALTDEHWILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQGRLI 106
EP+T A W A+ +++ E W + PP+ IG KW++K K + G +
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 107 RNKTRLVAQGYSQIEGLDFGETFAPTARLEAIRLILSFTCFRGFKLFQMDVKSVFLNGYL 166
R K RLVA+GY+Q EG+DF ETF+P +L +++LIL+ + F L Q+D+ + FLNG L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 167 SEEVYVAQPKGFV----DHVHHDHVYKLRKALYGLKQAPRAWYERLSTYLVQQGYRKGSA 226
EE+Y+ P G+ D + + V L+K++YGLKQA R W+ + S L+ G+ + +
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 227 DQKMFMYRQDSEFLIVQIYINDIIFGETSSAYVEKFVSQMKGEFEMSMVGELTFFLGFQI 286
D F+ + FL V +Y++DII + A V++ SQ+K F++ +G L +FLG +I
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 287 KQEDTDI 290
+ I
Sbjct: 325 ARSAAGI 331
BLAST of Cmc12g0323261 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 0
Query: 43 TSTMEPTTVVAALTDEHWILAIQEDLLQFERNQVWNLVPKPPHVNIIGTKWIFKNKIDEQ 102
T EP +V+ AL D W A+QE+L RN+ W LVP P + NI+G KW+FK K+
Sbjct: 23 TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82
Query: 103 GRLIRNKTRLVAQGYSQIEGLDFGETFAPTARLEAIRLILS 144
G L R K RLVA+G+ Q EG+ F ET++P R IR IL+
Sbjct: 83 GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94HW2 | 1.5e-47 | 38.93 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 9.6e-47 | 38.49 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 1.5e-36 | 34.91 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P10978 | 2.6e-36 | 34.62 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P92520 | 2.2e-19 | 47.52 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SWP6 | 6.9e-141 | 98.41 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G... | [more] |
A0A5D3E6X3 | 6.9e-141 | 98.41 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G... | [more] |
A0A5A7V046 | 3.2e-114 | 80.88 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G... | [more] |
A0A5A7TJM5 | 3.6e-113 | 71.82 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G0... | [more] |
A0A5A7V603 | 1.8e-104 | 69.07 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 4.3e-42 | 36.03 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.6e-20 | 47.52 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |