Cmc12g0323171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0323171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribosomal protein
Location	CMiso1.1chr12: 11804631 .. 11808811 (+)
RNA-Seq Expression	Cmc12g0323171
Synteny	Cmc12g0323171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGAGCTAGTAGATAATGCCCACCGATTGCAATGTATAAAATCTCCCTTTCTTAACCCTAATCTGTTTCGTTTTCTTTCCTCTCGGTATGTCGTCTCCTTTGCTCATTTGTTTTTCTTCATAATCTTTAATCGCATTACCATTTTCCATTGTCATTTGCTTTTCTTTGAAGTTTCTTACGGTTTCTCAACTCTGTTTGTGTACAGGACTGAAGGGTATACTGTCTTTGCGAAGGCGAAGATTCGAAAATGAGGTATTTTTTTCAGCATTCTCTTTGTTTTTCATAATTCTTTTGGTTTCAGATTCATGTTAGCATTTAGGTTGTACTGGTTCCGATTCTTGCACTCTTTTAGTTTCTTTTTTTCGATTCTACTGTTATATGAGTTTTATGGTTGCTAGAATAATGGGTTTTGTATAATTTAATCTAATCTTTTGAGTAATGTGAACTTTTGGAAAGGATGGATGATCTTTCGGAAGTAGGCCTCTTTTCTTTGATTCTACTGTTTTGAGTTTTATGGTTGCTAGAATAGTGGGTTGGTTCTGAATAATCTAATCTACTATTCGAGTAATGTAAACTTTTTAAGACAGTGGATTGATGATCTTTAGGGAGTAGGCTTTGTTTCTTCAATTCTACTGTTTTGAGTCGTATGGTTGCTAGGATAATGGATTCTGTATAATTTAATCTAATGTTCGAGTAATGTGAACTTTTGAGAAAGTGGATTGATAATCTTTTGGAAGTAGGCTTCTATTATTTGATTCCACCGATTTGAGTTTTATGGTCGCTAGAACAATGGGTTCGAAATGATTTTATCTAATGTTGGAGTAATGTGAACTTTTTGAGAGAGTGGATCGATAATCTTTAGGAAGTAGGCTTGTATTCCTGTGATTCTCCATGAAGTTTCTGCATGTGGTCGTTTTGGTTATACCCAGTTTTTTAAAGAGCTGTCTCAGGCTCAAGGCTTAGGTTTGGCGAAAGGAGACCTTTGTGCCTTTTGGCTCAAAGACCTGTGTCTTGGAGCTTTTTCTTTATTTTTAAGAAATGATCATAATTGGAAGTCTTTTCTTTTTTTTTTTTTTTTTTTACATATTTCCACTTCAACTATACTTGCTCTCCTTTGTAAAATACTGTTATCTAAAGTGCACCTCACGAAAATTTTTTTTTGCGCTTTGCGCTTAAGCCTAAGATTATTGTGCTTTATTGTGGCCATACCTTGTGCGTAGTCATATTGTCTTTTGTTTTCTCTATACAGTAAGCTTCAGAGTGATGCACTGAGAGAAGCTATCTCATCTATTTTCACTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAGACCATTGAGCTTCAGATCGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACATATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGTAATGTCACATAGCTCTAGGTACATGATCATGTTACTGCTGACCCTTAGATATTTTGCTTCGTATATCTTACTTTTGCTTATTGTAAGTTATAGAAATTTATTTTATTATGCTCGATATTTCTAAACTACATTTGTTTTCTTATAGCCAAATCTTTTGTTGGATTCTAAATATAATTTAAGAAGCATGGCTGCTTGTCTGCGTCCAACACGTTCTGGACAATTTGACACTTGGTGGAGACCTATCGGACACATGTTAGTGCAAAAAATGTGTTAGACATGCATAGAACACTAATTGAGTAGACTATGAAGACACATATATGATAGTAATAATAACTTTTAAGTGTAGAATACACAAAGATAAGTCTTTTAAGCATATAAATGCATCAACTCATTTACTATGAATTATATTTTACTATAAAAATGATATATATTTTTCAAAAATGAATATTTAAAAAATGTGTCCTTGCCGTGTCATGTCCTGGAATTTTAGAACATGGTATGTTGCTGTTTCCATGTCATGTCGTATCCATGTACATGCTTCTTGGAATATAGCCTTGTTTTTAAATTCCTACAGTTAAAGGAATTTTTGTGGTGTGTATAAGCTAAATATTAATGTTTCTGATGATTGTTTTGGAGATGAACGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAAAAGATTGGTTTAAGGATATGCCTTTTTTATCTGTTACTTGCACTTCTGGGAGCTCAGACGATGTGTCCTAATGGGGTTTCATGAAAATATATTTCAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAAAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGTTAGAATATTTAATGGAGATGTGTTTTTCTTCACAAAATATGATCAACTGATTAACTCCCTGGCGAAGTGATCCTTGTTATGTTCAACTTTCGATCATATTTTTGGTGTTTCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCCATGGATGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCTTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTAAGTTTGTCTGTGTATCTCCCAACTCAACTCCATCTGTTTCATCATTTTGCTTATGGAGATTTGAATACGGTTTCTTGCAGGTTAGGTGCCTGTACCTGAAAAGCACAATGGGGAAGTCATATCGGGTTTTCTAAGCACTGTTAGCAATGTAGTCAGTCTTGTGTGTTCGATCTTTTTATTATCGACGTTATTTCTCGAAGAGCAGTTTTGTGAAATGAGCGTTTTTGAATGATTCTTGAACAAAGAAACAGGAATGTTTTCTTCTCTTTTAAAGTGACAATTGATAATGAAGTTTTTAATTCCCACCCAACCTCACCTATTATGAACTTGTGTTTGCATTTACTTTGATCGTATTGTAGTTTTCTACTTCATGATCTCCATCCCAATATTAATTTTTTTTTATTTACAATTTTTTTTCCATACCATTAATGAAAACGCTTGATATGATATAGCCATTAGTTTGTATCTGATTTAAGCATCGGATATATGATAATCCGACTTATGTATGTGCATTTTGTTAGAAGATAGATGTTGGAAGTTTGCTTTATTTGTAAGAAGCATCTTTTGAGTTCATGAAACTGTAAGAAGAGTTTTGATACGTTTTTTTAAAAGATAATTTGTAATTATGAATATGTTCTATGTTACAATGGCATGTAATCAGATATTTTAAAAATACGATGGGTGGGCATCATAGATTGAAAACTGATTGAATTGGGTGCTGTCGGTATTTGGGCAGAGTTGGTTTCCACGACTAATTTGCACTCTTTTATGGTTGAGGTCAACCAACTGATGACCTTTATGTATTACAAAAAGAGGTTTGTAGATAAAACACTTGGCCATTTGAGGCTACAACATTAGTACTATGAATATCATACTTTCTTTATTCATATTAGAAATTTATCATCTTTATTAGCATTGGTCGACTCTGTTAACAAAGATTGTTCCATCATACTTTTAGAGATTTTTGAGTGAAATTATCTAATGAACTTGCAGATGCAGAAAAACTCATCTCACACTCATTCTGTTTTCTTTTTCTTTTACTCGTAACATTCTCCTCTCCCTTGCTCTTTCTCACCCTTTGATTTCTTAACACTTTGGCTTTGCAGAAGTTGGTCATAGATGCTTTCCTCTCCCACAGTTGGAGTTGGTGTATGGTTTTGTCGAAGTTTGGGTCGTGGAAAAGAGGGGAAAATGTTTATTGCATTGACGTTGGTTCCTAAGAGAGGTTGTGGTTTCCTCGAAGAAGAAGAGGAAAAAAGAAAGAAATATGAAGAAAATACAAAATTGAAATTTCACTTGAGGTTGATATTAGCAAGAAGAAAAAAAAAGGTAATTTTCATCTAAGGGACATTTGGCAACCAATATGTAATTGAGTCAGGCAAATAATTAGCGGTTTGATGCACCAACAATTGAATGAGTTTATTACCTTGTTATTCGTGTT

mRNA sequence

ATTTTGAGCTAGTAGATAATGCCCACCGATTGCAATGTATAAAATCTCCCTTTCTTAACCCTAATCTGTTTCGTTTTCTTTCCTCTCGGACTGAAGGGTATACTGTCTTTGCGAAGGCGAAGATTCGAAAATGAGTAAGCTTCAGAGTGATGCACTGAGAGAAGCTATCTCATCTATTTTCACTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAGACCATTGAGCTTCAGATCGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACATATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAAAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCCATGGATGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCTTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAAAGCACAATGGGGAAGTCATATCGGGTTTTCTAAGCACTGTTAGCAATGTAGTCAGTCTTGTGTGTTCGATCTTTTTATTATCGACGTTATTTCTCGAAGAGCAGTTTTGTGAAATGAGCGTTTTTGAATGATTCTTGAACAAAGAAACAGGAATGTTTTCTTCTCTTTTAAAGTGACAATTGATAATGAAGTTTTTAATTCCCACCCAACCTCACCTATTATGAACTTGTGTTTGCATTTACTTTGATCGTATTGTAGTTTTCTACTTCATGATCTCCATCCCAATATTAATTTTTTTTTATTTACAATTTTTTTTCCATACCATTAATGAAAACGCTTGATATGATATAGCCATTAGTTTGTATCTGATTTAAGCATCGGATATATGATAATCCGACTTATGTATGTGCATTTTGTTAGAAGATAGATGTTGGAAGTTTGCTTTATTTGTAAGAAGCATCTTTTGAGTTCATGAAACTGTAAGAAGAGTTTTGATACGTTTTTTTAAAAGATAATTTGTAATTATGAATATGTTCTATGTTACAATGGCATGTAATCAGATATTTTAAAAATACGATGGGTGGGCATCATAGATTGAAAACTGATTGAATTGGGTGCTGTCGGTATTTGGGCAGAGTTGGTTTCCACGACTAATTTGCACTCTTTTATGGTTGAGGTCAACCAACTGATGACCTTTATGTATTACAAAAAGAGGTTTGTAGATAAAACACTTGGCCATTTGAGGCTACAACATTAGTACTATGAATATCATACTTTCTTTATTCATATTAGAAATTTATCATCTTTATTAGCATTGGTCGACTCTGTTAACAAAGATTGTTCCATCATACTTTTAGAGATTTTTGAGTGAAATTATCTAATGAACTTGCAGATGCAGAAAAACTCATCTCACACTCATTCTGTTTTCTTTTTCTTTTACTCGTAACATTCTCCTCTCCCTTGCTCTTTCTCACCCTTTGATTTCTTAACACTTTGGCTTTGCAGAAGTTGGTCATAGATGCTTTCCTCTCCCACAGTTGGAGTTGGTGTATGGTTTTGTCGAAGTTTGGGTCGTGGAAAAGAGGGGAAAATGTTTATTGCATTGACGTTGGTTCCTAAGAGAGGTTGTGGTTTCCTCGAAGAAGAAGAGGAAAAAAGAAAGAAATATGAAGAAAATACAAAATTGAAATTTCACTTGAGGTTGATATTAGCAAGAAGAAAAAAAAAGGTAATTTTCATCTAAGGGACATTTGGCAACCAATATGTAATTGAGTCAGGCAAATAATTAGCGGTTTGATGCACCAACAATTGAATGAGTTTATTACCTTGTTATTCGTGTT

Coding sequence (CDS)

ATGAGTAAGCTTCAGAGTGATGCACTGAGAGAAGCTATCTCATCTATTTTCACTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAGACCATTGAGCTTCAGATCGGACTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACATATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAAAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCCATGGATGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCTTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAAAGCACAATGGGGAAGTCATATCGGGTTTTCTAA

Protein sequence

MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF

Homology

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BLAST of Cmc12g0323171 vs. NCBI nr
Match: XP_031736233.1 (60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Csa_022884 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of Cmc12g0323171 vs. NCBI nr
Match: XP_008461453.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >KAA0035447.1 60S ribosomal protein L10a [Cucumis melo var. makuwa] >TYK31075.1 60S ribosomal protein L10a [Cucumis melo var. makuwa])

HSP 1 Score: 417.9 bits (1073), Expect = 5.2e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of Cmc12g0323171 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 209/216 (96.76%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKS+MGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSSMGKSYRVF 216

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BLAST of Cmc12g0323171 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of Cmc12g0323171 vs. NCBI nr
Match: XP_022142655.1 (60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal protein L10a [Momordica charantia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI+SIF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNVSM+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-103
Identity = 188/216 (87.04%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMK+CMLGDA H+EEAEKIGL+YMDVE LKK+NKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-103
Identity = 188/216 (87.04%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMK+CMLGDA H+EEAEKIGL+YMDVE LKK+NKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-102
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-102
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GLE MDVE LKKLNKNKKLVKKLAKKYHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.8e-101
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL
Match: A0A0A0LVE6 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.1e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL
Match: A0A5A7T1H8 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003490 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL
Match: A0A1S3CEF7 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500042 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL
Match: A0A6J1CLJ2 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI+SIF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNVSM+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cmc12g0323171 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-103
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Cmc12g0323171 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-103
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Cmc12g0323171 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-103
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GLE MDVE LKKLNKNKKLVKKLAKKYHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cmc12g0323171 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cmc12g0323171 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of Cmc12g0323171 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736233.1	1.1e-113	100.00	60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Cs...	[more]
XP_008461453.1	5.2e-113	99.54	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >KAA0035447.1 60S ribosomal...	[more]
XP_038893874.1	1.7e-111	96.76	60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro...	[more]
XP_022932197.1	2.4e-110	95.83	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]
XP_022142655.1	2.4e-110	95.83	60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal p...	[more]

BLAST of Cmc12g0323171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	1.0e-103	87.04	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.0e-103	87.04	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
P59231	1.9e-102	88.48	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
Q8VZB9	2.5e-102	87.50	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59230	4.8e-101	86.11	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of Cmc12g0323171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVE6	5.1e-114	100.00	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1	[more]
A0A5A7T1H8	2.5e-113	99.54	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CEF7	2.5e-113	99.54	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500042 PE=3 SV=1	[more]
A0A6J1CLJ2	1.2e-110	95.83	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1	[more]
A0A6J1HYM1	1.2e-110	95.83	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1	[more]

BLAST of Cmc12g0323171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22440.1	1.4e-103	88.48	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.4e-103	88.48	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	1.8e-103	87.50	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	3.4e-102	86.11	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	3.4e-102	86.11	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 5.5E-50 score: 167.7
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 9.6E-62 score: 210.0
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 1.5E-44 score: 152.2
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 1.83247E-64 score: 196.636
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 9.6E-62 score: 210.0
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 21..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0323171.1	Cmc12g0323171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome