Cmc12g0321231 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0321231
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr12: 8249479 .. 8249841 (+)
RNA-Seq Expression	Cmc12g0321231
Synteny	Cmc12g0321231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGTTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACGTCCGGTTATTGTACCTTTGTTTGA

mRNA sequence

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGTTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACGTCCGGTTATTGTACCTTTGTTTGA

Coding sequence (CDS)

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGTTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACGTCCGGTTATTGTACCTTTGTTTGA

Protein sequence

MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV

Homology

[Close]

BLAST of Cmc12g0321231 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 8.8e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 8.8e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1327 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1386

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1387 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1446

[Close]

BLAST of Cmc12g0321231 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 8.8e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 8.8e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 8.8e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1385 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1444

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1445 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1504

[Close]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.4e-23
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TRPDIS+AV+ +SQFM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
             P E+H++ + RILRYL  TP  G+  +K N  ++ AY+D+DWAG   D  ST+GY  ++
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

[Close]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-21
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
           ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            P     +++ R+LRY+K T   GL   K ++  ++A+ DSDWAG    R+ST+G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-21
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLG-NSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFM 60
            ML  +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TRPD+S+AV+ +SQ+M
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1257

Query: 61   QAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTF 120
              P + H   + R+LRYL  TP  G+  +K N  ++ AY+D+DWAG   D  ST+GY  +
Sbjct: 1258 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1317

[Close]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-15
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNS------DDQVPVDKEQYQCLVGKLIY-LSHTRPDISFAVS 60
            M   +P  TP+  + KL         +++  + K  Y   VG L+Y +  TRPDI+ AV 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   VVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKST 117
            VVS+F++ P ++H E V  ILRYL+ T G  L F  ++   ++ YTD+D AG + +RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSS 1194

[Close]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.1e-14
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 31  YQCLVGKLIYLS-HTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRK 90
           Y   VG ++YL   TRPD++ AV V+SQF   P   H + + R+LRYL++T   GL F +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 91  TNRKTIEAYTDSDWAGSVIDRKSTSGY 117
                +  Y+D+DWAG V  R+STSGY
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGY 92

[Close]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

[Close]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL
Match: A0A5D3D7S1 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00430 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
           MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQ
Sbjct: 27  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 86

Query: 61  APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
           APYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
Sbjct: 87  APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 146

[Close]

BLAST of Cmc12g0321231 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
           ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
            P     +++ R+LRY+K T   GL   K ++  ++A+ DSDWAG    R+ST+G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of Cmc12g0321231 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQ 60
           +LGC+P+  P++ +           VD + Y+ L+G+L+YL  TR DISFAV+ +SQF +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 61  APYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 120
           AP   H + V +IL Y+K T G+GL +       ++ ++D+ +      R+ST+GYC F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

[Close]

BLAST of Cmc12g0321231 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14
Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 39  IYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAY 98
           +YL+ TRPD++FAV+ +SQF  A     M+ V ++L Y+K T G+GL +  T+   ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  TDSDWAGSVIDRKSTSGYCTFV 121
            DSDWA     R+S +G+C+ V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc12g0321231 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	8.8e-62	98.33	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	8.8e-62	98.33	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	8.8e-62	98.33	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	8.8e-62	98.33	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	8.8e-62	98.33	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0321231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	8.4e-23	42.50	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	2.1e-21	40.83	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	3.5e-21	41.32	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	6.5e-15	38.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	7.1e-14	44.83	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc12g0321231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	4.3e-62	98.33	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	4.3e-62	98.33	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	4.3e-62	98.33	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	4.3e-62	98.33	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5D3D7S1	4.3e-62	98.33	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc12g0321231 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	1.5e-22	40.83	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	6.8e-20	36.67	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	3.3e-14	41.46	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 26..118
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 26..118
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 22..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0321231.1	Cmc12g0321231.1	mRNA