Cmc12g0319281 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0319281
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr12: 4831908 .. 4832984 (+)
RNA-Seq ExpressionCmc12g0319281
SyntenyCmc12g0319281
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGAAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGTATAAAGTTCTCAAATTGAAGAAGACATTATATGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAAGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGAGGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTAGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTGTGGAATCTCCTACAACTACTCATTTGAAAGTGACAAAGAGAATTCTTCGTTACCTCAAAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCAAAAGAGCACTAGTGGGTATGTTTTCTTCATTGACAATACTGCATTTACATGGAGTTTTAAGAAGCAACCTATTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAA

mRNA sequence

ATGAAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGAAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGTATAAAGTTCTCAAATTGAAGAAGACATTATATGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAAGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGAGGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTAGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTGTGGAATCTCCTACAACTACTCATTTGAAAGTGACAAAGAGAATTCTTCGTTACCTCAAAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCAAAAGAGCACTAGTGGGTATGTTTTCTTCATTGACAATACTGCATTTACATGGAGTTTTAAGAAGCAACCTATTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAA

Coding sequence (CDS)

ATGAAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGAAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGTATAAAGTTCTCAAATTGAAGAAGACATTATATGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAAGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAAGGCGAGGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAAATTCTAGAGAAGTTCAATATGATGAATTCTAAGCCTGTCGCAACTCCGATTGAAACTAGGACCAAACTGTCCAAACATGAAGAAGGAGATGATGTTGATCCTTCATATTTCAAAAGTTTGGTTGGGAGTTTGAGATATTTGACTTGCACACGACCAGATATTCTTTTCAGCGTTGGATTGGTGAGTCGATTTGTGGAATCTCCTACAACTACTCATTTGAAAGTGACAAAGAGAATTCTTCGTTACCTCAAAGGTACGCTTGACTATGGGTTGTTTTATTCTTCATCTAAAGAATTCAAGCTTGAAGGCTATTGTGATAGTGACTGGGCTGGAGATACTAATGATCAAAAGAGCACTAGTGGGTATGTTTTCTTCATTGACAATACTGCATTTACATGGAGTTTTAAGAAGCAACCTATTGTGAGGCAGAATACGTTGCTGCAGCTTCATGTGTTTGTCATGCAGTTTGGTTAA

Protein sequence

MKKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNTLLQLHVFVMQFG
Homology
BLAST of Cmc12g0319281 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. NCBI nr
Match: TYK03241.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 776  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 835

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 836  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 895

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 896  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 955

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 956  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1015

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1016 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1075

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1076 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1120

BLAST of Cmc12g0319281 vs. NCBI nr
Match: TYK13816.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 904  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 963

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 964  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 1023

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 1024 PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1083

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1084 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1143

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1144 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1203

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1204 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1248

BLAST of Cmc12g0319281 vs. NCBI nr
Match: KAA0031444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.9e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-78
Identity = 144/344 (41.86%), Postives = 218/344 (63.37%), Query Frame = 0

Query: 4    GEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFL 63
            G + RYKARLV KGY+QR G+DY E F+PV +  +IR+++ +A   +W I Q+DV +AFL
Sbjct: 995  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1054

Query: 64   NGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPY 123
             G L +EVY+ QPPG+  K +   V +L+K +YGLKQAPR W   +  Y L  G++    
Sbjct: 1055 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1114

Query: 124  EHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIE 183
            + SL++   G   I+ + +YVDD++ T N   + +    A +Q F + +   + Y+LGIE
Sbjct: 1115 DTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE 1174

Query: 184  VKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLVG 243
             K+  +G+ +SQ RYT ++L + NM+ +KPVATP+ T  KL+ H      DP+ ++ +VG
Sbjct: 1175 AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVG 1234

Query: 244  SLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLE 303
            SL+YL  TRPD+ ++V  +S+++  PT  H    KR+LRYL GT D+G+F        L 
Sbjct: 1235 SLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1294

Query: 304  GYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQP-IVRQNT 347
             Y D+DWAGDT+D  ST+GY+ ++ +   +WS KKQ  +VR +T
Sbjct: 1295 AYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1337

BLAST of Cmc12g0319281 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.1e-77
Identity = 144/344 (41.86%), Postives = 215/344 (62.50%), Query Frame = 0

Query: 4    GEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFL 63
            G + RYKARLV KGY+QR G+DY E F+PV +  +IR+++ +A   +W I Q+DV +AFL
Sbjct: 1012 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1071

Query: 64   NGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPY 123
             G L ++VY+ QPPG+  K +   V KL+K LYGLKQAPR W   +  Y L  G++    
Sbjct: 1072 QGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVS 1131

Query: 124  EHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIE 183
            + SL++   G   I+ + +YVDD++ T N  ++  +     +Q F + D   + Y+LGIE
Sbjct: 1132 DTSLFVLQRGK-SIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1191

Query: 184  VKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLVG 243
             K+   G+ +SQ RY  ++L + NM+ +KPV TP+    KLS +      DP+ ++ +VG
Sbjct: 1192 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVG 1251

Query: 244  SLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLE 303
            SL+YL  TRPDI ++V  +S+F+  PT  HL+  KRILRYL GT ++G+F        L 
Sbjct: 1252 SLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLH 1311

Query: 304  GYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQP-IVRQNT 347
             Y D+DWAGD +D  ST+GY+ ++ +   +WS KKQ  +VR +T
Sbjct: 1312 AYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1354

BLAST of Cmc12g0319281 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-73
Identity = 145/348 (41.67%), Postives = 222/348 (63.79%), Query Frame = 0

Query: 8    RYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYL 67
            RYKARLV KG+ Q+KGID+DE+F+PV ++ +IR +++LAA  + ++ Q+DVK+AFL+G L
Sbjct: 873  RYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDL 932

Query: 68   EEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSL 127
            EEE+Y+EQP G+ V G+++ V KL K+LYGLKQAPR W  + + +     YL+   +  +
Sbjct: 933  EEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCV 992

Query: 128  YIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIEV--K 187
            Y K     + +++ LYVDD++       +   LK   ++ F+M D+G     LG+++  +
Sbjct: 993  YFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRE 1052

Query: 188  QSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKH------EEGDDVDPSYFK 247
            ++   +++SQE+Y   +LE+FNM N+KPV+TP+    KLSK       EE  ++    + 
Sbjct: 1053 RTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYS 1112

Query: 248  SLVGSLRY-LTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSK 307
            S VGSL Y + CTRPDI  +VG+VSRF+E+P   H +  K ILRYL+GT    L +  S 
Sbjct: 1113 SAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD 1172

Query: 308  EFKLEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
               L+GY D+D AGD +++KS++GY+F     A +W  K Q  V  +T
Sbjct: 1173 PI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALST 1219

BLAST of Cmc12g0319281 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 243.8 bits (621), Expect = 2.9e-63
Identity = 131/341 (38.42%), Postives = 202/341 (59.24%), Query Frame = 0

Query: 4    GEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFL 63
            G   RYKARLV +G++Q+  IDY+E FAPVAR+ + R +++L  Q N K+ QMDVK+AFL
Sbjct: 949  GNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFL 1008

Query: 64   NGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPY 123
            NG L+EE+Y+  P G S       V KL K +YGLKQA R W     +   +  ++    
Sbjct: 1009 NGTLKEEIYMRLPQGISCNSD--NVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSV 1068

Query: 124  EHSLYIKVNGH-GDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGI 183
            +  +YI   G+  + + V LYVDD++      +   + K+   ++F MTD+  + +++GI
Sbjct: 1069 DRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGI 1128

Query: 184  EVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLV 243
             ++  E+ I++SQ  Y ++IL KFNM N   V+TP+ ++         +D + +  +SL+
Sbjct: 1129 RIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN-TPCRSLI 1188

Query: 244  GSLRY-LTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEF- 303
            G L Y + CTRPD+  +V ++SR+     +   +  KR+LRYLKGT+D  L +  +  F 
Sbjct: 1189 GCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFE 1248

Query: 304  -KLEGYCDSDWAGDTNDQKSTSGYVF-FIDNTAFTWSFKKQ 340
             K+ GY DSDWAG   D+KST+GY+F   D     W+ K+Q
Sbjct: 1249 NKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQ 1286

BLAST of Cmc12g0319281 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-39
Identity = 77/209 (36.84%), Postives = 131/209 (62.68%), Query Frame = 0

Query: 138 LVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 197
           + + LYVDD++ T +  ++   L    +  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 198 YTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 257
           Y  +IL    M++ KP++TP+  +   S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 258 SVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDQ 317
           +V +V + +  PT     + KR+LRY+KGT+ +GL+   + +  ++ +CDSDWAG T+ +
Sbjct: 121 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 318 KSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
           +ST+G+  F+     +WS K+QP V +++
Sbjct: 181 RSTTGFCTFLGCNIISWSAKRQPTVSRSS 208

BLAST of Cmc12g0319281 vs. ExPASy TrEMBL
Match: A0A5A7V3X9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003030 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. ExPASy TrEMBL
Match: A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2    KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
            +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 879  EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 938

Query: 62   FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
            FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 939  FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 998

Query: 122  PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
            PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 999  PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 1058

Query: 182  IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
            IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 1059 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 1118

Query: 242  VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
            VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 1119 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 1178

Query: 302  LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 1179 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 1223

BLAST of Cmc12g0319281 vs. ExPASy TrEMBL
Match: A0A5D3D557 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00080 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2   KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
           +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 319 EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 378

Query: 62  FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
           FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 379 FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 438

Query: 122 PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
           PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 439 PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 498

Query: 182 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
           IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 499 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 558

Query: 242 VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
           VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 559 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 618

Query: 302 LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
           LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 619 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 663

BLAST of Cmc12g0319281 vs. ExPASy TrEMBL
Match: A0A5D3CJX7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00560 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0

Query: 2   KKGEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 61
           +KGEVERYKARLV KGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA
Sbjct: 557 EKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSA 616

Query: 62  FLNGYLEEEVYLEQPPGYSVKGQEYKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRC 121
           FLNGYLEEEVYLEQPPGYSVKGQE KVLKLKK LYGLKQAPRMWNSRINKYFLDNGYLRC
Sbjct: 617 FLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRINKYFLDNGYLRC 676

Query: 122 PYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLG 181
           PYEHSLYIKVNGHGDILVVCLYVDDLIFT NCASMFEDLKKA TQEFEMTDIGLMSYYLG
Sbjct: 677 PYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEMTDIGLMSYYLG 736

Query: 182 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSL 241
           IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIET TKLSKHEEGDDVDPSYFKSL
Sbjct: 737 IEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETGTKLSKHEEGDDVDPSYFKSL 796

Query: 242 VGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFK 301
           VGSLRYLTCTRPDILFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGLFYSSSKEFK
Sbjct: 797 VGSLRYLTCTRPDILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLFYSSSKEFK 856

Query: 302 LEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
           LEGYCDSDWAGDTND+KSTSGYVFFI NTAFTWS KKQPIV  +T
Sbjct: 857 LEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST 901

BLAST of Cmc12g0319281 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 265.4 bits (677), Expect = 6.7e-71
Identity = 129/347 (37.18%), Postives = 218/347 (62.82%), Query Frame = 0

Query: 4   GEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFL 63
           G +ERYKARLV KGY+Q++GID+ E F+PV +L +++L++A++A  N+ + Q+D+ +AFL
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200

Query: 64  NGYLEEEVYLEQPPGYSVKGQE----YKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYL 123
           NG L+EE+Y++ PPGY+ +  +      V  LKK++YGLKQA R W  + +   +  G++
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260

Query: 124 RCPYEHSLYIKVNGHGDILVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYY 183
           +   +H+ ++K+      L V +YVDD+I   N  +  ++LK      F++ D+G + Y+
Sbjct: 261 QSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 320

Query: 184 LGIEVKQSEEGIFISQERYTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFK 243
           LG+E+ +S  GI I Q +Y  ++L++  ++  KP + P++     S H  GD VD   ++
Sbjct: 321 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 380

Query: 244 SLVGSLRYLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKE 303
            L+G L YL  TR DI F+V  +S+F E+P   H +   +IL Y+KGT+  GLFYSS  E
Sbjct: 381 RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 440

Query: 304 FKLEGYCDSDWAGDTNDQKSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
            +L+ + D+ +    + ++ST+GY  F+  +  +W  KKQ +V +++
Sbjct: 441 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486

BLAST of Cmc12g0319281 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-40
Identity = 77/209 (36.84%), Postives = 131/209 (62.68%), Query Frame = 0

Query: 138 LVVCLYVDDLIFTRNCASMFEDLKKARTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 197
           + + LYVDD++ T +  ++   L    +  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 198 YTREILEKFNMMNSKPVATPIETRTKLSKHEEGDDVDPSYFKSLVGSLRYLTCTRPDILF 257
           Y  +IL    M++ KP++TP+  +   S        DPS F+S+VG+L+YLT TRPDI +
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 120

Query: 258 SVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLEGYCDSDWAGDTNDQ 317
           +V +V + +  PT     + KR+LRY+KGT+ +GL+   + +  ++ +CDSDWAG T+ +
Sbjct: 121 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 180

Query: 318 KSTSGYVFFIDNTAFTWSFKKQPIVRQNT 347
           +ST+G+  F+     +WS K+QP V +++
Sbjct: 181 RSTTGFCTFLGCNIISWSAKRQPTVSRSS 208

BLAST of Cmc12g0319281 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 72.4 bits (176), Expect = 8.3e-13
Identity = 30/77 (38.96%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 247 YLTCTRPDILFSVGLVSRFVESPTTTHLKVTKRILRYLKGTLDYGLFYSSSKEFKLEGYC 306
           YLT TRPD+ F+V  +S+F  +  T  ++   ++L Y+KGT+  GLFYS++ + +L+ + 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 307 DSDWAGDTNDQKSTSGY 324
           DSDWA   + ++S +G+
Sbjct: 62  DSDWASCPDTRRSVTGF 78

BLAST of Cmc12g0319281 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0

Query: 4   GEVERYKARLVEKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQ 49
           G ++R KARLV KG+ Q +GI + E ++PV R  TIR ++ +A Q
Sbjct: 83  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK18362.16.9e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK06895.16.9e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK03241.16.9e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK13816.16.9e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0031444.16.9e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
Q9ZT941.4e-7841.86Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW26.1e-7741.86Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P109781.1e-7341.67Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.9e-6338.42Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925192.3e-3936.84Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7V3X93.4e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SJX63.4e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3D4973.4e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3D5573.4e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3CJX73.4e-18795.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
AT4G23160.16.7e-7137.18cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.6e-4036.84DNA/RNA polymerases superfamily protein [more]
ATMG00240.18.3e-1338.96Gag-Pol-related retrotransposon family protein [more]
ATMG00820.11.4e-0446.67Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..218
e-value: 2.1E-76
score: 256.7
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..329
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 303..342
e-value: 8.94895E-17
score: 74.0417
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..341

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0319281.1Cmc12g0319281.1mRNA