Cmc11g0314391 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0314391
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Phosphorylated adapter RNA export protein
Location	CMiso1.1chr11: 33295153 .. 33297434 (-)
RNA-Seq Expression	Cmc11g0314391
Synteny	Cmc11g0314391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTCCTCTTCATCCTGGCTGCATCAGCTGCATCAGTACTGATCAAAACACCATCTTTTCGTTTCTCCCCTTTTCCTTCCTCTTCAATCTTCATATCTCCTTCCAACCCACGATCCCACGCCCTCTCCCCCGTACTCTCATCCCATTTCCACCGCTCTCTCGCTCAAGATTTCCCGTTAAAGCTTCACCGCCATTCCATTGATTCCTTCTCCATTTTCTGGGTAAGTTTTATGATCGCATTTGAGGTTTCCTCTTCTTTTAAACTGTGTTCTTATATCTGCTGCTCTCACTCTTCAAGTTCAACTGATTACTGGGAGGCTGTTGACTACACTTTTTGTACTTGTTTTGAAGCTATGATTGTTAAGGATATGGATTGTTTTAGTTTATTTACGCTCAAATTTGTAGTTTCCGTATTGAACTAATGCCATTTTTTTGAGCTATAATTTTCTGCCAATAAAGGGTGCATTCCTTCGATGGAAATTTCCTAAGACTTTTAGAGTTGAGAGCCAAATTCTTCTTTTCCAAGCTTTCTGTATCAAAACGGGAGCCACCATTTTTTGCAGCTTACTATCAAGAGAAGGTCCTTAAGATTGTCTATGGTGTTGGAAACTAAATCTTTCATCTTTCTATGAGCTTAATAAGAGAAACTCTTGATCTCTTCTAGGCCTTGAGGTGGGCGCTTACTTTTGGAGAAAAGAGAGGGAAAAAAAATGTGTTAACAAATTTTGACATTTTATTGTTGAGTAATTTTTATATCAGTGAGCGCCCAAAAGCTATGCGAGTGTTGATTTCATTTCCGTCTTGCTATCCTGATAATTTCAAGTTGCAGTTTATATATGTTCCCTGATACTTTCTCTTGGATGTTTGATTATTTTATGAAATCTTTTGTTTCTCTGAATAAAGAGTGTCTGATTATTTTATATAGTCGAGGTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTACGTGGAATCTTCTGATCATGTTGTTTATGCAATTGCATGGAAAAAGAAGCAATATTGCAAGCTTTCTCGAGATGCGTTTTTTGTTTGGAAATCCATTTTAGTTTTGTCGAGTAAATGTAGATTTAATAGAAGGAGTTTTTACTCTGGTTGCTATGTTATTATGCTGATTTCTGTGTTCTCTCAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGGTATTATGATTTTCTTGTAACCTGATAAAACAATATTTTGTTTGATTGAGTGATAAAAAATTCTGACCTATCCATTAGTATTATTTTGAAAACTTCCCTTCTGTTTTTTAAAGTTCTATTTGAAAGTGAATTGAATTGACCAGCCATTAACTAACCAAACCAACATAATTGAGTTTCATCTGTTTTCCCTTTTGGTTTACATTCAGCCCCCTAATGAGTAGACCCACGAAATATTTTGGAAATTGTTCTTTCTGTTGGGAAACCCTAGCCGGCCGTTTTCTTTTCTTCTTCTTTATCTATCATCTTCTTAATCCAAATCGATGTATCCGAAAACCATCTACTCTCTCTCTTCTTTAATCTTGTTCTGAGCTTGTTCTTGATCTTGATTCTATTCCTTATTCCGACGAGTGCACGTCGAAATAGGGAAGGCTGTGTTAACCCTGGGGAAAAACTGGCATCTTGATCGACACCATGGTCGTGCCGAAATTGCTTTCAAGGCAGTGGTTTGTCATAGCATAACAATTCCTTTTGACATCTTATTAACAACAATTCACTTCAGACTCCAGTACGTATCATACCACACAGCCACTCTTCATATTTAATCAGTATTATTTCCTACCCTTGCAGATTCTGTTGCTGAAGTCACTTTGCTCCTTTTAACCTTGTTCTGAGCTGTGAACCACCATTGCTGGACTACTACATCTGTGCTATATAAGTTGATGTTATTATCCCAGGATATATTGGTTACAATCTCTGTAAGATCTTTGTACTTTATTACAAAAAAACCTTTAGTATTGAT

mRNA sequence

TATTTCCTCTTCATCCTGGCTGCATCAGCTGCATCAGTACTGATCAAAACACCATCTTTTCGTTTCTCCCCTTTTCCTTCCTCTTCAATCTTCATATCTCCTTCCAACCCACGATCCCACGCCCTCTCCCCCGTACTCTCATCCCATTTCCACCGCTCTCTCGCTCAAGATTTCCCGTTAAAGCTTCACCGCCATTCCATTGATTCCTTCTCCATTTTCTGGTCGAGGTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGATTCTGTTGCTGAAGTCACTTTGCTCCTTTTAACCTTGTTCTGAGCTGTGAACCACCATTGCTGGACTACTACATCTGTGCTATATAAGTTGATGTTATTATCCCAGGATATATTGGTTACAATCTCTGTAAGATCTTTGTACTTTATTACAAAAAAACCTTTAGTATTGAT

Coding sequence (CDS)

ATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGCCGATGAGTTTGAAAATGATGATGTTGAAATGGCCGATGTGGAAGAAGGAGAGTTCATTGACGCCAATATCAATATAGAGAAAAGCAGTTTTACAGATGTTCAAGCACCAAGTACAGATCAGAGAAGTAAAAATCGTAAACGTCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGGATGCGTGCAGACGTTTGAAAGAGAAAAAGTCATACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCCGCATTAAGCGAACTTATCAAAGAGATTCTGTTGCTGAAGTCACTTTGCTCCTTTTAA

Protein sequence

MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRKRRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEILLLKSLCSF

Homology

[Close]

BLAST of Cmc11g0314391 vs. NCBI nr
Match: XP_008460135.1 (PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 6.6e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. NCBI nr
Match: KAA0040009.1 (uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK24493.1 uncharacterized protein E5676_scaffold266G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. NCBI nr
Match: XP_004144996.1 (uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

[Close]

BLAST of Cmc11g0314391 vs. NCBI nr
Match: XP_023547831.1 (uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 3.3e-46
Identity = 103/120 (85.83%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. NCBI nr
Match: KAG7013367.1 (hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.1 bits (492), Expect = 7.3e-46
Identity = 102/120 (85.00%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D +SKNRK
Sbjct: 64  MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHKSKNRK 123

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 124 RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 183

[Close]

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL
Match: A0A1S3CD38 (Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC103499036 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL
Match: A0A5D3DLH5 (Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00350 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDG ENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL
Match: A0A0A0KBJ7 (Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G076770 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123

[Close]

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL
Match: A0A6J1H592 (Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC111460255 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 102/120 (85.00%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D +SKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHKSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKE+
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL
Match: A0A6J1KUZ4 (Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC111498940 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60
           MDGQENILEAIYE D+ ENDDVEM DVEEGE ++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGELVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEI 120
           RR+KKKKNKRK+ E GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSE IKE+
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEFIKEV 120

[Close]

BLAST of Cmc11g0314391 vs. TAIR 10
Match: AT3G20430.1 (CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 6.2e-19
Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 1   MDGQENILEAIYEADEFEN-DDVEMADVEEGEF-IDANI------NIEKSSFTDVQAPST 60
           M+G+E++L+AI E D FEN +DVEM DVEEGE  +D ++      N +     D +A   
Sbjct: 1   MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIVVDHDLDSGERQNDDGDGVKDKEAILG 60

Query: 61  DQRSKNRKRRTKKKKNKRKSSEP-GSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVS 120
           ++    +  + K+KK K+K   P       ++ FV D CRRLKEKKSYM+YTAVGCLG++
Sbjct: 61  EKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCLGIA 120

Query: 121 ALSELIKEILLLKS 126
           ALS+L+ E++ +++
Sbjct: 121 ALSDLVNEVVAIET 134

The following BLAST results are available for this feature:

BLAST of Cmc11g0314391 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460135.1	6.6e-55	99.17	PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo]	[more]
KAA0040009.1	2.5e-54	98.33	uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK...	[more]
XP_004144996.1	2.2e-50	93.33	uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus]	[more]
XP_023547831.1	3.3e-46	85.83	uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo]	[more]
KAG7013367.1	7.3e-46	85.00	hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cmc11g0314391 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0314391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CD38	3.2e-55	99.17	Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC10349903...	[more]
A0A5D3DLH5	1.2e-54	98.33	Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0KBJ7	1.1e-50	93.33	Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G07...	[more]
A0A6J1H592	3.5e-46	85.00	Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KUZ4	2.3e-45	84.17	Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cmc11g0314391 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20430.1	6.2e-19	43.28	CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-bindi...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 77..126 e-value: 1.3E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..82
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0314391.1	Cmc11g0314391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006408	snRNA export from nucleus