Cmc11g0314171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0314171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 33170601 .. 33175466 (-)
RNA-Seq Expression	Cmc11g0314171
Synteny	Cmc11g0314171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAATCAAATCGATAACAATGACTCAAGCCCTCAACAGAGGCTTCGGAGTCACGAAGAACCCACCCAACATCGTCCAACCACCGCGAGGCACTGTTATTCCAAACCTCAGGCGGAATCCAAGAAGCCCTTTCAATATTCACACCCAAAATCCACACCACAACCTAAACCCTTTGAATATTCGTTAATAATTTAGTTGTGATTTTTTTTTTGTTATACTATATTCTTATTTTAAATTTTAAATTAGTGATTTATGAAAGGTCTTATAAATTAAGGCGTGCATATTGTAATCTCAAAGTTGAGGAAAACAAACCCTAGCTGTGCCGTTCGATCTCTTTTATCCCCTTGGAGTTGGGATTCATTGGGAGCTTTGTCACGGAAAATTGAAATAACATCCATCAAAGATGGAGAAGCCAATGAGAAAGAGGAAGAGGACTTATACTCGGTCGAATGTTATTGAGGTAATACTCTCCATACTTCGTCTGTAACAATTAGAATGAATCGATTTTAAATCCACACATTCTGCTCTGTGCCCGTTGTCACCAGATGTATTGCATCGACTTTAACCATAATTGTTTGGGAGGGAACAATTTTGTGGCCAGGTTTCCCGTTCTCCACTGTTAAGTGTTATTGCAATGGGCTGCTGTTACTTTACCGGTCTCTCGATAAACTTTTTCGTATGGACATATTAAATCCATGACGAAGGAGTATCGTATCTTAGACTTCCGGTTGACCACGACTATGTGTGAGAGATTGAAGCCGAGCTCAGAGGTAATTGCCATACATATATTTACTATGGGAACAAGTAAACTTTTAGCCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTACTTTTTCTAGTTTTTATTTTAAAAATCACAATTTTATACGAAAATCAAGAAAAATATAATAAATAATAAGTTCAGAAGATAAAAGAAATTTGAAAATTCACTACAAATTCCAATTTCTTTGAAAATCTCAACCAACCAACCATATTTGGTGGGGGAGGGGATATAATTTACAAAGATACAATTAAAAATGAAATTATTTAACCTTCTATGTTAGGAAGCATGCCCCTTCCATCTTCCCAAAGGGTGGGCTCTCAAATTCATTACCTGTAACTCTTATTTTCTTTGCTCGTTTTTCATTAGATTTTCTTTGAAGGGTTTTCTTGTAAAGGGGTTAATTGAATATTTTTTTAAAAGATATCTGACATAGACAAAAAGAACTCATATCAGAATAAGTGATAGAGACATTAGACCTACAAGAGCTTAGAACAATTGATATCTTTACCAAGGAGTCTCTTACTTAAATCTCCACACGCTTCATTCATACTAAAAAGAAAAAAGAGAAAAAAAGTTGATAGTGATATTATTACTTACAAGGAGAAAAGGGAAAAAGAACGTGAGAAAGATAGTGAAGCTCATTACTTAAAAGAACAAAAGTTCAAAAAAGTTGGGAGTTTGTTTCTTAAGAAACAGAGAAATCCTAGTTTCTATCGTCGTCAAACAATGCCTCTTCACAGAAAAACATAGACATAGACACACAATGGACAGAATACTCAGACCTTTTTATTGCAACATAAGAGATCATGTCATTAGAACGGAACCTCTTGGAAGTGGTCTCTACAGAAATTCCCGCCCAAATTCAAACAAATTGTAGCTGTTGGATACGTTTCCGCGAATTACAACTAACCTGTTCTAAATAACTTGTTTGGCAGCGGCAATAACAGCTTCCACGGTTATACCGAACTCTTTGTAAATTTTCCCTGCTGGAGCACTTGCTCCGAAGCGGTCAATGCCGATTGCTTTTCCTTTGCTTCCAACAATCTTCTCCCACCCAAATGTTGTTCCAGCCTCAATACTCACTCTGGCAGAAACAGCAGCCGGCAGAACACTTTCCTTATATGCATCTGATTGCTCGTTGAAGAGCTCCCAGGAGACGAAGGAAACAAGTCGAACGGCCTTTCCTTCCTTTCTTAGTTCTTCTGCTGCTTTGGCAGCAATTTCAAGTTCAGAACCGGTTCCAATCAAGATAACATCAGGCTTGTTGCCTGAGGAATTGTCTGAGAGAATGTATCCACCCTTTTCAACTCCCTCAATGGAAGTTCCAGGAAGATTTGGCAACTTTTGTCGAGAAAGAGCAAGAATGGAAGGTCTCTTTCGGTTAAGTACTGCAACTTTATATGCCCCTGCGGTCTCATTACCATCAGCTGGTCGGAGCATCAATATGTTTGGCATAGCCCTAAAGCTTGCCAGATGTTCAATTGGCTGATGGGTCGGCCCATCTTCACCAAGACCGATTGAATCGTGAGTCATGACATAGATTACACCAGCTTGACTTAAGGCAGATATCCTAATGGCAGCTCTCATGTAGTCGGTGAAAACAAAGAACGTAGCACAATAAGGAATGAGTCCAGGACTATGAAGGGCAATTCCATTGCAGATGGCTCCCATCCCGTGCTCTCTAACACCAAATCGGAGATTACGCTCTTCAGGAGTATCCTTTTGGAAGTTTCCAAATGATTTAAGCAGGGTCATGTTTGATGAAGCAAGGTCCGCACTTCCACCAAGGAAACCAGGAAGAACCTTTGCAAGGGCATTAAGGTTTTGTTGGGAAAGATTTCTTGTAGCATCTGCTGGGCTCTCTGGGGTGTATGTCTGCAAATGCAATGAAAATGCTCAGTTATTTGGCAATAACAACTTACAATGTAGTTTTTCATGAAGAAAAAAGTGAAATCTAATCACATGTTATAATGTGTCAGTTTGATGAGTTTTGCATTTAGAAGTGTTGTAAACAGCCATGTCCGGGGTGGGTACTCACTGGCAATGCTTTTTCCCAACCAGCAGGTAGTTTGCCACTAATAATAGACTTCAGTTCAGCAGCTTCCTCTGCATATTTCTTCTCGTATTCGGCAAACTTAGTGTTCCATTCGGCTTCAAGAGCAGCTCCTTGAGGAGTGTGACGACTCCAGTGCCTTTGGGATGAAACAAGTGTAGATAAATAACGAATCAACTCCTTTAAACTAAAATAAACTATATAAAAAAATTAAAAATGAAATAGACAGTCAATTTATCATCTGTATCCATACTTTTTAACATCCTCGGGCACATGGAAAGGCTCGTATGGCCATCCAAGGTTCTGTCTTGTGGCATCAACTTCCTTCGCACCTAGTGCACTACCATGTACGCTGTAGGAATTTGCCTTGTTTGGAGATCCGTAACCAATAGTTGTTGTCACCTACAATATTTTAAAGTTAAAACTCAGCACACCCAAGTCATTGAAAATAACCACTGCTTGGTAAAGCTAGTTCGGATTCACTTCCATAAATATAAAGATCAAATTTCCCTTGAACTCCTTAATACTACATATGATACAACAACTTAAACTTTACTTTCATATGATTTGAAACTAAGAACAATACTACAGAACTAGGCAAGAAAACAGGAGCTCTGGGCATCAAAAGTTCTAAGGAGATTGCATACCTTGATCAAAGTGGGTTTGTCTTTTACAGCTTTCGCTTCCCTAATGGCAGCGCGAATCTCATCATAACCATTATTTCCATTTTTCACCCAGATGACATGCCACCCTAGAGCATCGAATCGTTTGTCAACACTCTCAGTGAATGCAATCTCTGTGTCACCATCAATTGAGATGTGGTTGTCATCGTAGAAAGCAATTAGCTTTCCTAGTCCCCAGTGCCCAGCAAGAGAACAAGCTTCGTTGGCAATTCCCTCCATTTGGCACCCGTCTCCCAGTATAACATACCTGTTGATTGAACGAAATGAGCAAGAAAAGGATAGAGCATCATTAAGAAGCGTTCTTTATAATGAATCAAATAAGTTCACTGATTTGTGTCGTATATCGTACGTGTAATGGTCAACAATTTCGTTATCTGGTTTGTTGAAGCGAGCGGCTAAATGCTTCTCAGCAAGTGCCAAACCAACAGCATTTGCAACACCCTGACCAAGAGGACCTTCACAATACAAAACAATTGACAATCAAACAAAAGCAACAATAATCTCCAAAATGGTGGGAATAGAGAAATCTAACCAGTTGTTACTTCAATTCCAGGTGTCTCGAAGTTCTCGGGATGCCCAGGAGTTCTGCTTTCCCATTGACGGAAATTCTTTAAGTCCTCTTCCTAATCATTAACCAGATCTAAAGTCATCAACCAGCGAGAATACAAATTGGTCTTTTTCATGGTAAATTGACCGTGCTTGACAAACAATAAACCCAAAACCCAAAACCTTAACGAAAACTTGAAGTTAAATTCTTAAAAAAAGAAAAAAAAAAAAAAAAGTCAGCTTACAATGAAGAAAAACACTAGTTTATATCATGGGCCATATAGTTTCTATAGGCAAACTTCTAAAAGAACAGTATAACAAGTTTCAATCGCCCATTCGAGTACCATTATCAAATAGGAACCGAACGAAAAATAATAATAATCAGAACCAGCCTTGGAGATCCAATTGCAATCCGGAATCACAAAATTCAAATAACATCCGAAGAGAAGAATAAGGCAGATCAAACTCAAACAAATGAACAAAAAGAGATGGGTAAAAAATAACTCAGACAAGGGCTACCTTAACACTATCATATCCAGCAAGGTGAAGCAAAGCGTACTGCAACATGCAGCCATGGCCAGCTGACAAGACGAACCGATCCCGATTAAACCAGTAAGGATTCTTGGGATTATACCTCATAACCTCATCGTACAAAACATGACCCATCGGAGCACAACCCATAGGCAATCCCGGGTGACCCGAATTCGCCTTCTCCACAGCATCAATCGAGAGGAAACGGATCGTATTGACAGACTTCTCAATCAACGAAGTCTCAGTGGTTTTATCCAGCGTCT

mRNA sequence

TCAAAATCAAATCGATAACAATGACTCAAGCCCTCAACAGAGGCTTCGGAGTCACGAAGAACCCACCCAACATCGTCCAACCACCGCGAGGCACTGTTATTCCAAACCTCAGGCGGAATCCAAGAAGCCCTTTCAATATTCACACCCAAAATCCACACCACAACCTAAACCCTTTGAATATTCGTTAATAATTTAGTTGTGATTTTTTTTTTGTTATACTATATTCTTATTTTAAATTTTAAATTAGTGATTTATGAAAGGTCTTATAAATTAAGGCGTGCATATTGTAATCTCAAAGTTGAGGAAAACAAACCCTAGCTGTGCCGTTCGATCTCTTTTATCCCCTTGGAGTTGGGATTCATTGGGAGCTTTGTCACGGAAAATTGAAATAACATCCATCAAAGATGGAGAAGCCAATGAGAAAGAGGAAGAGGACTTATACTCGGTCGAATGTTATTGAGATGTATTGCATCGACTTTAACCATAATTGTTTGGGAGGGAACAATTTTGTGGCCAGGTTTCCCGTTCTCCACTGTTAAGTGTTATTGCAATGGGCTGCTGTTACTTTACCGGTCTCTCGATAAACTTTTTCGTATGGACATATTAAATCCATGACGAAGGAGTATCGTATCTTAGACTTCCGGTTGACCACGACTATGTGTGAGAGATTGAAGCCGAGCTCAGAGCGGCAATAACAGCTTCCACGGTTATACCGAACTCTTTGTAAATTTTCCCTGCTGGAGCACTTGCTCCGAAGCGGTCAATGCCGATTGCTTTTCCTTTGCTTCCAACAATCTTCTCCCACCCAAATGTTGTTCCAGCCTCAATACTCACTCTGGCAGAAACAGCAGCCGGCAGAACACTTTCCTTATATGCATCTGATTGCTCGTTGAAGAGCTCCCAGGAGACGAAGGAAACAAGTCGAACGGCCTTTCCTTCCTTTCTTAGTTCTTCTGCTGCTTTGGCAGCAATTTCAAGTTCAGAACCGGTTCCAATCAAGATAACATCAGGCTTGTTGCCTGAGGAATTGTCTGAGAGAATGTATCCACCCTTTTCAACTCCCTCAATGGAAGTTCCAGGAAGATTTGGCAACTTTTGTCGAGAAAGAGCAAGAATGGAAGGTCTCTTTCGGTTAAGTACTGCAACTTTATATGCCCCTGCGGTCTCATTACCATCAGCTGGTCGGAGCATCAATATGTTTGGCATAGCCCTAAAGCTTGCCAGATGTTCAATTGGCTGATGGGTCGGCCCATCTTCACCAAGACCGATTGAATCGTGAGTCATGACATAGATTACACCAGCTTGACTTAAGGCAGATATCCTAATGGCAGCTCTCATGTAGTCGGTGAAAACAAAGAACGTAGCACAATAAGGAATGAGTCCAGGACTATGAAGGGCAATTCCATTGCAGATGGCTCCCATCCCGTGCTCTCTAACACCAAATCGGAGATTACGCTCTTCAGGAGTATCCTTTTGGAAGTTTCCAAATGATTTAAGCAGGGTCATGTTTGATGAAGCAAGGTCCGCACTTCCACCAAGGAAACCAGGAAGAACCTTTGCAAGGGCATTAAGGTTTTGTTGGGAAAGATTTCTTGTAGCATCTGCTGGGCTCTCTGGGGTGTATGTCTGCAAATGCAATGAAAATGCTCAGTTATTTGGCAATAACAACTTACAATGTAGTTTTTCATGAAGAAAAAAGTGAAATCTAATCACATGTTATAATGTGTCAGTTTGATGAGTTTTGCATTTAGAAGTGTTGTAAACAGCCATGTCCGGGGTGGGTACTCACTGGCAATGCTTTTTCCCAACCAGCAGGTAGTTTGCCACTAATAATAGACTTCAGTTCAGCAGCTTCCTCTGCATATTTCTTCTCGTATTCGGCAAACTTAGTGTTCCATTCGGCTTCAAGAGCAGCTCCTTGAGGAGTGTGACGACTCCAGTGCCTTTGGGATGAAACAAGTGTAGATAAATAACGAATCAACTCCTTTAAACTAAAATAAACTATATAAAAAAATTAAAAATGAAATAGACAGTCAATTTATCATCTGTATCCATACTTTTTAACATCCTCGGGCACATGGAAAGGCTCGTATGGCCATCCAAGGTTCTGTCTTGTGGCATCAACTTCCTTCGCACCTAGTGCACTACCATGTACGCTGTAGGAATTTGCCTTGTTTGGAGATCCGTAACCAATAGTTGTTGTCACCTACAATATTTTAAAGTTAAAACTCAGCACACCCAAGTCATTGAAAATAACCACTGCTTGGTAAAGCTAGTTCGGATTCACTTCCATAAATATAAAGATCAAATTTCCCTTGAACTCCTTAATACTACATATGATACAACAACTTAAACTTTACTTTCATATGATTTGAAACTAAGAACAATACTACAGAACTAGGCAAGAAAACAGGAGCTCTGGGCATCAAAAGTTCTAAGGAGATTGCATACCTTGATCAAAGTGGGTTTGTCTTTTACAGCTTTCGCTTCCCTAATGGCAGCGCGAATCTCATCATAACCATTATTTCCATTTTTCACCCAGATGACATGCCACCCTAGAGCATCGAATCGTTTGTCAACACTCTCAGTGAATGCAATCTCTGTGTCACCATCAATTGAGATGTGGTTGTCATCGTAGAAAGCAATTAGCTTTCCTAGTCCCCAGTGCCCAGCAAGAGAACAAGCTTCGTTGGCAATTCCCTCCATTTGGCACCCGTCTCCCAGTATAACATACCTGTTGATTGAACGAAATGAGCAAGAAAAGGATAGAGCATCATTAAGAAGCGTTCTTTATAATGAATCAAATAAGTTCACTGATTTGTGTCGTATATCGTACGTGTAATGGTCAACAATTTCGTTATCTGGTTTGTTGAAGCGAGCGGCTAAATGCTTCTCAGCAAGTGCCAAACCAACAGCATTTGCAACACCCTGACCAAGAGGACCTTCACAATACAAAACAATTGACAATCAAACAAAAGCAACAATAATCTCCAAAATGGTGGGAATAGAGAAATCTAACCAGTTGTTACTTCAATTCCAGGTGTCTCGAAGTTCTCGGGATGCCCAGGAGTTCTGCTTTCCCATTGACGGAAATTCTTTAAGTCCTCTTCCTAATCATTAACCAGATCTAAAGTCATCAACCAGCGAGAATACAAATTGGTCTTTTTCATGGTAAATTGACCGTGCTTGACAAACAATAAACCCAAAACCCAAAACCTTAACGAAAACTTGAAGTTAAATTCTTAAAAAAAGAAAAAAAAAAAAAAAAGTCAGCTTACAATGAAGAAAAACACTAGTTTATATCATGGGCCATATAGTTTCTATAGGCAAACTTCTAAAAGAACAGTATAACAAGTTTCAATCGCCCATTCGAGTACCATTATCAAATAGGAACCGAACGAAAAATAATAATAATCAGAACCAGCCTTGGAGATCCAATTGCAATCCGGAATCACAAAATTCAAATAACATCCGAAGAGAAGAATAAGGCAGATCAAACTCAAACAAATGAACAAAAAGAGATGGGTAAAAAATAACTCAGACAAGGGCTACCTTAACACTATCATATCCAGCAAGGTGAAGCAAAGCGTACTGCAACATGCAGCCATGGCCAGCTGACAAGACGAACCGATCCCGATTAAACCAGTAAGGATTCTTGGGATTATACCTCATAACCTCATCGTACAAAACATGACCCATCGGAGCACAACCCATAGGCAATCCCGGGTGACCCGAATTCGCCTTCTCCACAGCATCAATCGAGAGGAAACGGATCGTATTGACAGACTTCTCAATCAACGAAGTCTCAGTGGTTTTATCCAGCGTCT

Coding sequence (CDS)

ATGCCGATTGCTTTTCCTTTGCTTCCAACAATCTTCTCCCACCCAAATGTTGTTCCAGCCTCAATACTCACTCTGGCAGAAACAGCAGCCGGCAGAACACTTTCCTTATATGCATCTGATTGCTCGTTGAAGAGCTCCCAGGAGACGAAGGAAACAAGTCGAACGGCCTTTCCTTCCTTTCTTAGTTCTTCTGCTGCTTTGGCAGCAATTTCAAGTTCAGAACCGGTTCCAATCAAGATAACATCAGGCTTGTTGCCTGAGGAATTGTCTGAGAGAATGTATCCACCCTTTTCAACTCCCTCAATGGAAGTTCCAGGAAGATTTGGCAACTTTTGTCGAGAAAGAGCAAGAATGGAAGGTCTCTTTCGGTTAAGTACTGCAACTTTATATGCCCCTGCGGTCTCATTACCATCAGCTGGTCGGAGCATCAATATGTTTGGCATAGCCCTAAAGCTTGCCAGATGTTCAATTGGCTGA

Protein sequence

MPIAFPLLPTIFSHPNVVPASILTLAETAAGRTLSLYASDCSLKSSQETKETSRTAFPSFLSSSAALAAISSSEPVPIKITSGLLPEELSERMYPPFSTPSMEVPGRFGNFCRERARMEGLFRLSTATLYAPAVSLPSAGRSINMFGIALKLARCSIG

Homology

[Close]

BLAST of Cmc11g0314171 vs. NCBI nr
Match: CAA2623879.1 (unnamed protein product [Spirodela intermedia] >CAA7399860.1 unnamed protein product [Spirodela intermedia])

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-06
Identity = 46/88 (52.27%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 1  MPIAFPLLPTIFSHPNVVPASILTLAETAAGRTLSLYASDCSLKSSQETKETSRTAFPSF 60
          MP A PLLPT   +P+V  AS LTLA T  GRTLSLY+S CS  SSQ T +T+RT FP  
Sbjct: 13 MPTALPLLPTYLCYPSVASASTLTLAVTTPGRTLSLYSSVCSSNSSQLTSDTTRTFFPP- 72

Query: 61 LSSSAALAAISSSEPVPIKITSGLLPEE 89
           SS+  L    S  P P +   G LP E
Sbjct: 73 -SSAPPLPWWRS--PAPSREHGGPLPVE 96

[Close]

BLAST of Cmc11g0314171 vs. ExPASy TrEMBL
Match: A0A7I8KPY5 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009783 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 46/88 (52.27%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 1  MPIAFPLLPTIFSHPNVVPASILTLAETAAGRTLSLYASDCSLKSSQETKETSRTAFPSF 60
          MP A PLLPT   +P+V  AS LTLA T  GRTLSLY+S CS  SSQ T +T+RT FP  
Sbjct: 13 MPTALPLLPTYLCYPSVASASTLTLAVTTPGRTLSLYSSVCSSNSSQLTSDTTRTFFPP- 72

Query: 61 LSSSAALAAISSSEPVPIKITSGLLPEE 89
           SS+  L    S  P P +   G LP E
Sbjct: 73 -SSAPPLPWWRS--PAPSREHGGPLPVE 96

The following BLAST results are available for this feature:

BLAST of Cmc11g0314171 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA2623879.1	3.1e-06	52.27	unnamed protein product [Spirodela intermedia] >CAA7399860.1 unnamed protein pro...	[more]

BLAST of Cmc11g0314171 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0314171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7I8KPY5	1.5e-06	52.27	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009783 PE=4 SV...	[more]

BLAST of Cmc11g0314171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0314171.1	Cmc11g0314171.1	mRNA