Cmc11g0314021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0314021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Tubulin-specific chaperone A
Location	CMiso1.1chr11: 33067147 .. 33073037 (+)
RNA-Seq Expression	Cmc11g0314021
Synteny	Cmc11g0314021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCGAAGGACCAAACAGACATTTTCAAATCTCGAATACAAACAATCTACCAATTATTGTGGCAGCTCCTCAGTTGGCCCCAAGTCTTTTCATTTTCGACTTCTTCTTCTTCACTCGAAAAAACACCTCCCACGCTCTCTCTGCGCGCCGCTCAGCTTGCCGGACCTCCCTCCCACTCTAGCGGTCATCTCTCTCGCCGGACGTCGAGTCCCAGCTGTGCACGCCGTCGACCCTCCGCGTAGGAACTCCCGCCCAGCCGCGCTTCTTCCGTCTATACCGCCACACCCAATCACTGGTTTTTCCGGTTCGTCTGCGGCTATTCTTCGCGCCGCCGGGACTTATCGTCGCCATTCTTACCGGATCTTGGCTTTGGGGTAAGATTTATTTGATGTGGTTGGGTTTCTGGAAGATTTTTGAACACCCAATGAATGTTGGCTTCAAATTAGTGATACCCTTGTTTGGTTTGATGGTAAATTTACCCATGATTTTGGAATGCTAGAATTCGGATTAGAAGAATGTTAGTGGGCTGCTCACAAAGTTAAGACGAACTCTTGCAGTTTTGGGTAATTTTAGTGAGTTTTCATAGAGTTGTTGAATACCTTACCCAAATTGATTGATGTTCTTCATCTTTCTGCTTTAGATTCAAAATTTGGAGAACATTAATGTAGTATCCAGCGGCTTAAGGTTAAGGTTGGCAAGATTTTACTTAAAACGAAGTGGGTAGAGCTTACAATCCCATGAGATCAAGCCATTGACAGTGGGTGGTTTATTTAAAAATTGTTTGGGATCGGGATGATACTTGAGGGTGTCTGAACACTCTGTAGTTTGGATATTGTAAGTTTAGAAGTGAAATTTTCATCTCTTTTTCAGGAGTGGTTAATCAATTATTTAACAGTCCCTTATTTTAGAATAGTGTTTTTAGATAGTGTCTTGTCATAGATCCAGGTTAGAGAGATAATCTGAAACGGCTTGTGGCAACTTACCTCCATGATACAAGAAATTTCGTGGAAAAGCTGACGTTGAAAACATGCTCCCAGTCTGAATTTTCAATAGCATCCTAGGATTTAAGAAAGAATGTGTACCAATTAATTACCATGAATTCACACGACCTCTAACAAAGTTTAAGAATATGATAACATTGATTCATAATGAACCCCCAATTTTCATTCTTTTGTGGGAACTGAGAAGCAAAAGATTGTCTCTCTTAGAAGCTTCAATTCAGTGAATTAGGTTTATGGTGTGAAATCTAGGTACTTATCCTAAATGGGAGACTTGTGGATTCCTAATCCATGATAAATGCTTTTGGTGATAGGTCAGTATGGCTACTGTAAAGAACCTTAAGATTAAGACAGCGACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTGGAGAGAGAAGCTTCCAAAACAGCTGACATGAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGTATGCAAGTGGGTTGTATTCTTAATGATCAAAACTTCAAAAGTTGATAATTGTTTGCTTTGACTGCTTGTGGATTTGTTTGTGCCATCTGAAGACCTTAAAAAGAAATTCTTAGACATTCAAAATTATAAATTTTTCTTTAAACAACAGGTGTGTAAATGGTTTGCATTCTTAATAATCAAAAGTTTGTAGGATTATTGTCTGCTTGAGTGCTTGTGCATTTGTTTGTTCCATCATTGAGTGAAGACGGTTTTCAGGGTAGGACTTCTGCAATTGTTTTTAGCCTTTAAATTTCTTGTTGCCGTTCAACTTTATTCTAGATATAAAATCAAAACGACTAAAATTTTATTTAGGATAATGGAGACTAAATGTAATGCCATCATCATACAAATCCTCTTGTTCAATTGGTTAAGTATTTTATTACGATTTTACAATTAGCATTCTCATTGTAATCAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGGTCGCCTTAGCTGATCTGAAAGAAGCCCTGGTATCAATGATCATTACCTTCACTTTTCATTCTTCCCTTTCTTGCCCTTCTTAGGAGAGCTTGAATGAAGGTTATGTGAGTAAACATTTTTTCATCTTCTTCATCTCCAGGCTGACCTGGAAAAATCAACAGAAGAGAAAGGTCCCGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTTTCTAAAGCCAACAGAGGAATAATTGTGAGTTTGTCACCGCCTGATTGTTTTCAGAAGTTATAATTCAAACTATTGCATTACTGTATTAGTTCTCAAATGTTTGGTTTTTGGATGTTATGATTATACTTTGGAAAGAGTTTCTTCTTCTGTTCTTCATTACTATCACCAAAGTGTAAGACTAAACTCTTCTCCTGGATGTTGTGTTTTAAAATATTTTGATGGCGTTTACCCAAATTTAAAGGAATAGATTTCTAAATATATGCCAACAGCAATCGAATACATTTGCTTGTTGAATGAGTTCTACGTAAGCATTAATGATGATTAATACGAAGTTTGGTAACTAAAGTAAATGTAATATTAATTATTAATCAGAAGTCAATGACCATGGGTAGGCCTAGTTGCCAAAGAAAAAAGTGAATAAACTTTCTAAAAGAATGATTTCAATGCCTCTAGCCTATATTCTATAATACAATGTGAAATTGATAGTACAAATTTGGTAACCTATAAGTAGGATTCACTTTGAGATATTATAATTCTTGACTATTGTTATTATCTTTTTTAAGAAATAATTCATTGTTGTTGAGTTAGGTGACTTTCATGATATTGGATGCAGTACACGTGTATCTTAGATCACTTAATCACAATTATTAAAAAGTATAGTGATTAAGCCAAAGTTGGCGTGGATATTATTGTTTAATTGCCACTTATTTGTTTTTTTTTTTTTTTTTGGTTAAATTAGAACATAATATATAACTCCAAAATCTTCCAAGAACTTTAAAAGCAATGTTTAAATTATAGGGGCTAAATGGTCAATTAAAAATAATATAGTTCAAATACAACTAATCTCATGAACATAAGAGTAGATAACCAAACAAAACTCAAGAAATTTGTTGAATTCAAGAACTTAATGTAATTTAAAAGAAATATGACCATGAGGATTAGGTGGTTTTTGGTGAGTTGAACTCATTTGATAACTACGTCAACAAAAAAATATTTGAAGCTTTTCTTTTCTTTCTTTTAAAACAAGTTAATACAATTCAATTGTTATCCGTTACTTTTGAATCAAGAACCATGACCTCAAGAGATAGATTGTTTTAAGGTATAATTGAAATGATGTCGATCAAATAAGTACAAGAGGAATGTAGGAAAGGGACCGATGGAATAAGGACTAGGGAAAGGAGGGGCTGAACTTGCTCCCCTCGACCTTGGAGGCTTTGATCCTTGGCTTCGGAGGTCACACTGTGTGCCTTTCCGATTCCAGAAGGCTTACTTCTCATATGCTACGATCCAAAACTCCTTGATCGGCCTGAATTTGTATTTCCTAATTTCTTTTGAATTCGGAATTCCAAATCCACTCCTTTATCAATAAGAGGTCGTAGGCATCACCCAGGATAAAATATTTCATACACTTTCTCTAACCCTTTTCTAAATAATGACAAACACTACACTTGTGTTCTCTTTTTACTTATAGGTCATAGTGATAATGACAAGCACCAAACCAGTGTTTTATCTTTTTGCTTATAGGTCATAGTCAAATATACGTGAAGGTCGAGAGAGTTTCCTTGTCTGAATTTTGCCATTTACGACAATTATTATTGTTATTATTTTTATATATATTTAGTGAACTTCCATTGACGACAGAGATGAAAAAGTGGCGTTTTGCTTCTTTTTTTACTTTCGTTTTTTCTCCTTTTAACTTTCCTTCCTTCCAAATAATCTTATGTTCTGGGAATTGAAAAGAATAAGTAATTAAATTGGGTCTATAAAGATAACAAAGGATATGATGGAGCCTAGAAGGTAAGATAAGATGCAAGAGACATCACCTTTTGCTGTACAAAATGCCAAATTTTATAGCCTTGAGAGATAAATTCATACAAATGTATCCCCATCTTTGTTTATGTTTCTTACACATCAATTTTACCTTAAACAGTTTTTTTTTCTTTGGCTTTTTCCTTTTCCTTTCCCTTGTCTCCCTATGAATGCCGAGGCGTTCTCCTAATCTTCCTTCGGAACGGCCTACATGCCTCAATGCTGAGATCAACTGCAGCTGCAAGCGCCATGAAAATAGCAGCATCTTCTATACATGTCACGTGTCGCATTGCGAGTTGAACCGTTGGCTTACTGCTTCTTCCTTCCCCTTGTACTCTGCAACTCATGACAAAGCCTCCAACCACTTGGCCTAATGCTGCAAAGTCTCCACTGCTCTGTGGACTCGGTATTGGACTTGTTGCTGCTCGCAATTGTTTGTCGGTGTCTATAAAGAATTCCCCGCCTTTCTCGGCATTGATATGGATCTCAGACATGAGAAGCTCACCTCCCTCTTGGGCTTCAGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATCCCACGCTCGCGCCACGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGGTATGCAAACATCAGGACGAACAATCAGCCAGGACCCGGGGTTTGACCTGGCAACCCAATCGCAACCTGTTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTTCGCTCGACCTCAAGATCCGAGCCATCACCAAGACCTGACCAATAGTTGCTCAAGGAATCCGCCTGGGATACCCTATTAATTAATTTCAACCGTCAAAGATTGAGTCCCACATGAAGAAAAGCAAAGCAGTGTTCAAAAAAGGCAATGCCATATTGCAGAAATACAAAATTTTTAACAGAAGAAAGATTCCTCTAGTTTTGTGTGAATTGCATCACCTGTCTCGACTAAATTTGCAACTGAAGATCGGCTGCTTGATTGAGCCTTGAAGCTGGACGATTTGGGGGCTTGATCTAGTAACATCTTGGAACTGAAAAACATATCTTGGATCAGGATCTAGTTTAACTCTCAAATGAAGCTCTGCTCCATGTCTTCCATTCTCATTCTTGCTTTTGCCAATGCCTATCCACCCATTAAAAAGAATGACTGGCTTCCCATCACCCCACTCAGGACTGACGTCCAGTTTAAACGTCCCGATCAGCTGCCTTTTGATCCCAACACCACAGTGGGATCCCTTCCTTCCCGAGAAGACAGATATTTCAAGACAGGCATGGGTGTTGTAGAAGCAGCCAGGTGCCAGTAATGCTTTCAGATCGGACTCTTCAAGATAGAAGCTTGAGGCAATGACATGAGAGTCAGGTATTGCTTCAGGAGACGGGACTAGAGGGATTGAAGATGTCTGCATAGGGAAACCCCGAAGACGAATTTCACACGAACACGGAGAAGAGAAAGCATTGACTCCAGGTTTTGTAGAGTTTAGAGAAGTTCCTGGGATTCTCAATCCCAATGATCCAATTGACAACCTAATAAACGCCTGAGGATCCATTCCGGTCACAATTTTTTGTCCATTTGATAGATCATTAATATTTCGACAAGCTCAAGTGTCCTAAACCAACAAGAAAACAATAATCAGAAACAAAAGTAACTGACATATTGCTTGATAGTCCTTGTTTCTGTAATGAATTTGGGTAATATTTGGGCTTTAAAATACAAAAGACAAGAAAGACGAGAATTGTCCATCAAAGTTCAACTATCAAACGGAAAAACATCAATCTATTGATCAATTAAGCATAGCAGAGACATCTTCAACATCAAACATATATCTGT

mRNA sequence

TTTTTTCGAAGGACCAAACAGACATTTTCAAATCTCGAATACAAACAATCTACCAATTATTGTGGCAGCTCCTCAGTTGGCCCCAAGTCTTTTCATTTTCGACTTCTTCTTCTTCACTCGAAAAAACACCTCCCACGCTCTCTCTGCGCGCCGCTCAGCTTGCCGGACCTCCCTCCCACTCTAGCGGTCATCTCTCTCGCCGGACGTCGAGTCCCAGCTGTGCACGCCGTCGACCCTCCGCGTAGGAACTCCCGCCCAGCCGCGCTTCTTCCGTCTATACCGCCACACCCAATCACTGGTTTTTCCGGTTCGTCTGCGGCTATTCTTCGCGCCGCCGGGACTTATCGTCGCCATTCTTACCGGATCTTGGCTTTGGGGTCAGTATGGCTACTGTAAAGAACCTTAAGATTAAGACAGCGACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTGGAGAGAGAAGCTTCCAAAACAGCTGACATGAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGGTCGCCTTAGCTGATCTGAAAGAAGCCCTGGCTGACCTGGAAAAATCAACAGAAGAGAAAGGTCCCGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTTTCTAAAGCCAACAGAGGAATAATTGTGAGTTTGTCACCGCCTGATTGTTTTCAGAAGTTATAATTCAAACTATTGCATTACTGTATTAGTTCTCAAATGTTTGGTTTTTGGATGTTATGATTATACTTTGGAAAGAGTTTCTTCTTCTGTTCTTCATTACTATCACCAAAGTGTAAGACTAAACTCTTCTCCTGGATGTTGTGTTTTAAAATATTTTGATGGCGTTTACCCAAATTTAAAGGAATAGATTTCTAAATATATGCCAACAGCAATCGAATACATTTGCTTGTTGAATGAGTTCTACGTAAGCATTAATGATGATTAATACGAAGTTTGGTAACTAAAGTAAATGTAATATTAATTATTAATCAGAAGTCAATGACCATGGGTAGGCCTAGTTGCCAAAGAAAAAAGTGAATAAACTTTCTAAAAGAATGATTTCAATGCCTCTAGCCTATATTCTATAATACAATGTGAAATTGATAGTACAAATTTGGTAACCTATAAGTAGGATTCACTTTGAGATATTATAATTCTTGACTATTGTTATTATCTTTTTTAAGAAATAATTCATTGTTGTTGAGTTAGGTGACTTTCATGATATTGGATGCAGTACACGTGTATCTTAGATCACTTAATCACAATTATTAAAAAGTATAGTGATTAAGCCAAAGTTGGCGTGGATATTATTGTTTAATTGCCACTTATTTGTTTTTTTTTTTTTTTTTGGTTAAATTAGAACATAATATATAACTCCAAAATCTTCCAAGAACTTTAAAAGCAATGTTTAAATTATAGGGGCTAAATGGTCAATTAAAAATAATATAGTTCAAATACAACTAATCTCATGAACATAAGAGTAGATAACCAAACAAAACTCAAGAAATTTGTTGAATTCAAGAACTTAATGTAATTTAAAAGAAATATGACCATGAGGATTAGGTGGTTTTTGGTGAGTTGAACTCATTTGATAACTACGTCAACAAAAAAATATTTGAAGCTTTTCTTTTCTTTCTTTTAAAACAAGTTAATACAATTCAATTGTTATCCGTTACTTTTGAATCAAGAACCATGACCTCAAGAGATAGATTGTTTTAAGGTATAATTGAAATGATGTCGATCAAATAAGTACAAGAGGAATGTAGGAAAGGGACCGATGGAATAAGGACTAGGGAAAGGAGGGGCTGAACTTGCTCCCCTCGACCTTGGAGGCTTTGATCCTTGGCTTCGGAGGTCACACTGTGTGCCTTTCCGATTCCAGAAGGCTTACTTCTCATATGCTACGATCCAAAACTCCTTGATCGGCCTGAATTTGTATTTCCTAATTTCTTTTGAATTCGGAATTCCAAATCCACTCCTTTATCAATAAGAGGTCGTAGGCATCACCCAGGATAAAATATTTCATACACTTTCTCTAACCCTTTTCTAAATAATGACAAACACTACACTTGTGTTCTCTTTTTACTTATAGGTCATAGTGATAATGACAAGCACCAAACCAGTGTTTTATCTTTTTGCTTATAGGTCATAGTCAAATATACGTGAAGGTCGAGAGAGTTTCCTTGTCTGAATTTTGCCATTTACGACAATTATTATTGTTATTATTTTTATATATATTTAGTGAACTTCCATTGACGACAGAGATGAAAAAGTGGCGTTTTGCTTCTTTTTTTACTTTCGTTTTTTCTCCTTTTAACTTTCCTTCCTTCCAAATAATCTTATGTTCTGGGAATTGAAAAGAATAAGTAATTAAATTGGGTCTATAAAGATAACAAAGGATATGATGGAGCCTAGAAGGTAAGATAAGATGCAAGAGACATCACCTTTTGCTGTACAAAATGCCAAATTTTATAGCCTTGAGAGATAAATTCATACAAATGTATCCCCATCTTTGTTTATGTTTCTTACACATCAATTTTACCTTAAACAGTTTTTTTTTCTTTGGCTTTTTCCTTTTCCTTTCCCTTGTCTCCCTATGAATGCCGAGGCGTTCTCCTAATCTTCCTTCGGAACGGCCTACATGCCTCAATGCTGAGATCAACTGCAGCTGCAAGCGCCATGAAAATAGCAGCATCTTCTATACATGTCACGTGTCGCATTGCGAGTTGAACCGTTGGCTTACTGCTTCTTCCTTCCCCTTGTACTCTGCAACTCATGACAAAGCCTCCAACCACTTGGCCTAATGCTGCAAAGTCTCCACTGCTCTGTGGACTCGGTATTGGACTTGTTGCTGCTCGCAATTGTTTGTCGGTGTCTATAAAGAATTCCCCGCCTTTCTCGGCATTGATATGGATCTCAGACATGAGAAGCTCACCTCCCTCTTGGGCTTCAGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATCCCACGCTCGCGCCACGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGGTATGCAAACATCAGGACGAACAATCAGCCAGGACCCGGGGTTTGACCTGGCAACCCAATCGCAACCTGTTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTTCGCTCGACCTCAAGATCCGAGCCATCACCAAGACCTGACCAATAGTTGCTCAAGGAATCCGCCTGGGATACCCTATTAATTAATTTCAACCGTCAAAGATTGAGTCCCACATGAAGAAAAGCAAAGCAGTGTTCAAAAAAGGCAATGCCATATTGCAGAAATACAAAATTTTTAACAGAAGAAAGATTCCTCTAGTTTTGTGTGAATTGCATCACCTGTCTCGACTAAATTTGCAACTGAAGATCGGCTGCTTGATTGAGCCTTGAAGCTGGACGATTTGGGGGCTTGATCTAGTAACATCTTGGAACTGAAAAACATATCTTGGATCAGGATCTAGTTTAACTCTCAAATGAAGCTCTGCTCCATGTCTTCCATTCTCATTCTTGCTTTTGCCAATGCCTATCCACCCATTAAAAAGAATGACTGGCTTCCCATCACCCCACTCAGGACTGACGTCCAGTTTAAACGTCCCGATCAGCTGCCTTTTGATCCCAACACCACAGTGGGATCCCTTCCTTCCCGAGAAGACAGATATTTCAAGACAGGCATGGGTGTTGTAGAAGCAGCCAGGTGCCAGTAATGCTTTCAGATCGGACTCTTCAAGATAGAAGCTTGAGGCAATGACATGAGAGTCAGGTATTGCTTCAGGAGACGGGACTAGAGGGATTGAAGATGTCTGCATAGGGAAACCCCGAAGACGAATTTCACACGAACACGGAGAAGAGAAAGCATTGACTCCAGGTTTTGTAGAGTTTAGAGAAGTTCCTGGGATTCTCAATCCCAATGATCCAATTGACAACCTAATAAACGCCTGAGGATCCATTCCGGTCACAATTTTTTGTCCATTTGATAGATCATTAATATTTCGACAAGCTCAAGTGTCCTAAACCAACAAGAAAACAATAATCAGAAACAAAAGTAACTGACATATTGCTTGATAGTCCTTGTTTCTGTAATGAATTTGGGTAATATTTGGGCTTTAAAATACAAAAGACAAGAAAGACGAGAATTGTCCATCAAAGTTCAACTATCAAACGGAAAAACATCAATCTATTGATCAATTAAGCATAGCAGAGACATCTTCAACATCAAACATATATCTGT

Coding sequence (CDS)

ATGGCTACTGTAAAGAACCTTAAGATTAAGACAGCGACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTGGAGAGAGAAGCTTCCAAAACAGCTGACATGAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGGTCGCCTTAGCTGATCTGAAAGAAGCCCTGGCTGACCTGGAAAAATCAACAGAAGAGAAAGGTCCCGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTTTCTAAAGCCAACAGAGGAATAA

Protein sequence

MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE

Homology

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BLAST of Cmc11g0314021 vs. NCBI nr
Match: XP_008460084.1 (PREDICTED: tubulin-folding cofactor A [Cucumis melo] >XP_008460085.1 PREDICTED: tubulin-folding cofactor A [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 2.7e-52
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 113

[Close]

BLAST of Cmc11g0314021 vs. NCBI nr
Match: TYK24522.1 (tubulin-folding cofactor A [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 7.8e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 128 MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 187

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 188 MVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 240

[Close]

BLAST of Cmc11g0314021 vs. NCBI nr
Match: KAA0039980.1 (tubulin-folding cofactor A [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 7.8e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 61  MVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 113

[Close]

BLAST of Cmc11g0314021 vs. NCBI nr
Match: XP_004145016.1 (tubulin-folding cofactor A isoform X2 [Cucumis sativus] >XP_011656707.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus] >XP_031743287.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus] >XP_031743288.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus] >XP_031743289.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus] >KAE8646706.1 hypothetical protein Csa_005119 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 106/113 (93.81%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLE ALADLK+ALA+LEKST+EKGPEFDDARSTIND+ESFLKP EE
Sbjct: 61  MVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTINDVESFLKPIEE 113

[Close]

BLAST of Cmc11g0314021 vs. NCBI nr
Match: XP_022155762.1 (tubulin-folding cofactor A [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 96/113 (84.96%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           M+PDCHKRLE +LADLK ALA+LE+ST+EKGPEFD+ARSTI+++E+FLK TEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

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BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot
Match: O04350 (Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 7.1e-40
Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           M+PDCHKRLE ALADLK  LA+LE++ E++GPE +DA+ T+ D+E    PTE+
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQF-PTED 112

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BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot
Match: P80585 (Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 4   VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVP 63
           ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+P
Sbjct: 6   LRQIKIKTGVVKRLAKEKVMYEKEAKQQEEKIEKMKAEACDDYGIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIE 106
           DC +RLE+A ADL + L + EK  EE   E+ +ARS +  ++
Sbjct: 66  DCQRRLEIAHADLTQLLEN-EKELEE-AEEYKEARSILESVK 105

[Close]

BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot
Match: O75347 (Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 4   VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVP 63
           V+ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIE 106
           DC +RLE A  DL+  L + EK  EE   E+ +AR  ++ ++
Sbjct: 66  DCQRRLEAAYLDLQRILEN-EKDLEE-AEEYKEARLVLDSVK 105

[Close]

BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot
Match: Q6PEC1 (Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 4   VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVP 63
           V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIE 106
           DC +RLE A  DL++ L + EK  EE   E+ +AR  ++ ++
Sbjct: 66  DCQRRLEAAYTDLRQIL-ESEKDLEE-AEEYKEARIVLDSVK 105

[Close]

BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot
Match: P48428 (Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3)

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-13
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 4   VKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRMMVP 63
           V+ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 64  DCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIE 106
           DC +RLE A  DL++ L + EK  EE   E+ +AR  ++ ++
Sbjct: 66  DCQRRLEAAYTDLQQIL-ESEKDLEE-AEEYKEARVVLDSVK 105

[Close]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL
Match: A0A1S3CBQ5 (Tubulin-specific chaperone A OS=Cucumis melo OX=3656 GN=LOC103499001 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 113

[Close]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL
Match: A0A5D3DLX2 (Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00640 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 128 MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 187

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 188 MVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 240

[Close]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL
Match: A0A5A7T9L5 (Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002620 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLEVALADLKEALA+LEKSTEEKGPEFDDARSTINDIESFLKPTEE
Sbjct: 61  MVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 113

[Close]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL
Match: A0A0A0KER0 (Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 106/113 (93.81%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 129 MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 188

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           MVPDCHKRLE ALADLK+ALA+LEKST+EKGPEFDDARSTIND+ESFLKP EE
Sbjct: 189 MVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTINDVESFLKPIEE 241

[Close]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL
Match: A0A6J1DQ83 (Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.6e-45
Identity = 96/113 (84.96%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           M+PDCHKRLE +LADLK ALA+LE+ST+EKGPEFD+ARSTI+++E+FLK TEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]

BLAST of Cmc11g0314021 vs. TAIR 10
Match: AT2G30410.1 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 164.5 bits (415), Expect = 5.1e-41
Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           M+PDCHKRLE ALADLK  LA+LE++ E++GPE +DA+ T+ D+E    PTE+
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQF-PTED 112

[Close]

BLAST of Cmc11g0314021 vs. TAIR 10
Match: AT2G30410.2 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 164.5 bits (415), Expect = 5.1e-41
Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAESRM 60
           MAT++NLKIKT+TCKRI+KEL SYEKEVEREA+KTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 61  MVPDCHKRLEVALADLKEALADLEKSTEEKGPEFDDARSTINDIESFLKPTEE 114
           M+PDCHKRLE ALADLK  LA+LE++ E++GPE +DA+ T+ D+E    PTE+
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQF-PTED 112

The following BLAST results are available for this feature:

BLAST of Cmc11g0314021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460084.1	2.7e-52	100.00	PREDICTED: tubulin-folding cofactor A [Cucumis melo] >XP_008460085.1 PREDICTED: ...	[more]
TYK24522.1	7.8e-52	99.12	tubulin-folding cofactor A [Cucumis melo var. makuwa]	[more]
KAA0039980.1	7.8e-52	99.12	tubulin-folding cofactor A [Cucumis melo var. makuwa]	[more]
XP_004145016.1	2.1e-49	93.81	tubulin-folding cofactor A isoform X2 [Cucumis sativus] >XP_011656707.1 tubulin-...	[more]
XP_022155762.1	1.6e-44	84.96	tubulin-folding cofactor A [Momordica charantia]	[more]

BLAST of Cmc11g0314021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04350	7.1e-40	73.45	Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2	[more]
P80585	3.9e-14	43.14	Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2	[more]
O75347	2.6e-13	41.18	Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3	[more]
Q6PEC1	2.6e-13	41.18	Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1	[more]
P48428	7.4e-13	40.20	Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3	[more]

BLAST of Cmc11g0314021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBQ5	1.3e-52	100.00	Tubulin-specific chaperone A OS=Cucumis melo OX=3656 GN=LOC103499001 PE=3 SV=1	[more]
A0A5D3DLX2	3.8e-52	99.12	Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7T9L5	3.8e-52	99.12	Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0KER0	1.0e-49	93.81	Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=...	[more]
A0A6J1DQ83	7.6e-45	84.96	Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3...	[more]

BLAST of Cmc11g0314021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30410.1	5.1e-41	73.45	tubulin folding cofactor A (KIESEL)	[more]
AT2G30410.2	5.1e-41	73.45	tubulin folding cofactor A (KIESEL)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..89
None	No IPR available	GENE3D	1.20.58.90		coord: 1..113 e-value: 2.7E-40 score: 139.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..113
None	No IPR available	PANTHER	PTHR21500:SF4	TUBULIN-SPECIFIC CHAPERONE A	coord: 1..113
IPR004226	Tubulin binding cofactor A	PFAM	PF02970	TBCA	coord: 7..88 e-value: 1.3E-26 score: 92.8
IPR004226	Tubulin binding cofactor A	PANTHER	PTHR21500	TUBULIN-SPECIFIC CHAPERONE A	coord: 1..113
IPR036126	Tubulin binding cofactor A superfamily	SUPERFAMILY	46988	Tubulin chaperone cofactor A	coord: 3..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0314021.1	Cmc11g0314021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007023	post-chaperonin tubulin folding pathway
biological_process	GO:0007021	tubulin complex assembly
molecular_function	GO:0048487	beta-tubulin binding