Cmc11g0313461 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0313461
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 32762829 .. 32763428 (-)
RNA-Seq Expression	Cmc11g0313461
Synteny	Cmc11g0313461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACTCTCAGATCGAGGCAAAATGGCCGTTATCTTCGTTACATTAACGACGATAAGACCATGCATGGGTTTCTCACGTTCTCTGGAACTCATGTCGTGAGCCCTTTCGCCAAGTTTGAGGTTGAAAAGGCTAAAGAGAAATCTAACAAGGGTCTTAGCTTGTTCATATCAGGTGTGTAACGCATTTATTTTTCTCTAAATATTTCTGAACTTGTTTTACAAATATATTTTCTTTTCTGAAAATATGTTAGGGTTTGGATCGAGAGCCTCTATCAAATGAGTTATGCTCATTTTAATAATATGAGTTCAAACTTGAAATACTCACTGAAGATGATGAACGAAATGAGACTATTTTGGGGACAAGAATAAGATCCAAAGCATATACTGTTATATCATTCGAATTAATTGGGTATTTGGTAGATTACATTATTATCATCAATTTATTTGAAGCAAAATAGTAGCAAAAAGGAAATCTACTAATAAAAAAGATTAAAAAGACCAAAATCTCACTCTCAATCACACACAAATGTATTTGTTATAACTATTGTCTCTAAAACAATTTTTCTTTTAAGGTGTTGTTACATTCCATGAGGGCTGAG

mRNA sequence

CTTCACTCTCAGATCGAGGCAAAATGGCCGTTATCTTCGTTACATTAACGACGATAAGACCATGCATGGGTTTCTCACGTTCTCTGGAACTCATGTCGTGAGCCCTTTCGCCAAGTTTGAGGTTGAAAAGGCTAAAGAGAAATCTAACAAGGGTCTTAGCTTGTTCATATCAGGTGTTGTTACATTCCATGAGGGCTGAG

Coding sequence (CDS)

ATGCATGGGTTTCTCACGTTCTCTGGAACTCATGTCGTGAGCCCTTTCGCCAAGTTTGAGGTTGAAAAGGCTAAAGAGAAATCTAACAAGGGTCTTAGCTTGTTCATATCAGGTGTTGTTACATTCCATGAGGGCTGA

Protein sequence

MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGLSLFISGVVTFHEG

Homology

[Close]

BLAST of Cmc11g0313461 vs. NCBI nr
Match: XP_004140599.3 (uncharacterized protein LOC101212310 [Cucumis sativus] >KAE8646725.1 hypothetical protein Csa_004815 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 65

[Close]

BLAST of Cmc11g0313461 vs. NCBI nr
Match: XP_004140598.3 (uncharacterized protein LOC101212067 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 8.0e-08
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLKFSGTHVVSPFAKFEVEKAKEKSNKGL 65

[Close]

BLAST of Cmc11g0313461 vs. NCBI nr
Match: XP_038875952.1 (uncharacterized protein LOC120068303 [Benincasa hispida])

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL F+GTHVVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLKFNGTHVVSPFAKFEVEKAKEKSNKGL 65

[Close]

BLAST of Cmc11g0313461 vs. NCBI nr
Match: XP_022992244.1 (uncharacterized protein LOC111488623 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVV+PFAKFEVEKAKEKSNKGL
Sbjct: 36 MHGFLKFSGTHVVNPFAKFEVEKAKEKSNKGL 67

[Close]

BLAST of Cmc11g0313461 vs. NCBI nr
Match: XP_022953531.1 (uncharacterized protein LOC111456051 [Cucurbita moschata])

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVV+PFAKFEVEKAKEKSNKGL
Sbjct: 36 MHGFLKFSGTHVVNPFAKFEVEKAKEKSNKGL 67

[Close]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL
Match: A0A0A0KEX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084600 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.8e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 65

[Close]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL
Match: A0A0A0KBV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G085110 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-08
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLKFSGTHVVSPFAKFEVEKAKEKSNKGL 65

[Close]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL
Match: A0A6J1JX13 (uncharacterized protein LOC111488623 OS=Cucurbita maxima OX=3661 GN=LOC111488623 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVV+PFAKFEVEKAKEKSNKGL
Sbjct: 36 MHGFLKFSGTHVVNPFAKFEVEKAKEKSNKGL 67

[Close]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL
Match: A0A6J1GN79 (uncharacterized protein LOC111456051 OS=Cucurbita moschata OX=3662 GN=LOC111456051 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGTHVV+PFAKFEVEKAKEKSNKGL
Sbjct: 36 MHGFLKFSGTHVVNPFAKFEVEKAKEKSNKGL 67

[Close]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL
Match: A0A5A7TEN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001200 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-07
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 0


Query: 1  MHGFLTFSGTHVVSPFAKFEVEKAKEKSNKGL 33
          MHGFL FSGT VVSPFAKFEVEKAKEKSNKGL
Sbjct: 34 MHGFLKFSGTQVVSPFAKFEVEKAKEKSNKGL 65

The following BLAST results are available for this feature:

BLAST of Cmc11g0313461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140599.3	1.6e-08	100.00	uncharacterized protein LOC101212310 [Cucumis sativus] >KAE8646725.1 hypothetica...	[more]
XP_004140598.3	8.0e-08	96.88	uncharacterized protein LOC101212067 [Cucumis sativus]	[more]
XP_038875952.1	1.8e-07	93.75	uncharacterized protein LOC120068303 [Benincasa hispida]	[more]
XP_022992244.1	1.8e-07	93.75	uncharacterized protein LOC111488623 [Cucurbita maxima]	[more]
XP_022953531.1	1.8e-07	93.75	uncharacterized protein LOC111456051 [Cucurbita moschata]	[more]

BLAST of Cmc11g0313461 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEX2	7.8e-09	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084600 PE=3 SV=1	[more]
A0A0A0KBV4	3.9e-08	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G085110 PE=3 SV=1	[more]
A0A6J1JX13	8.7e-08	93.75	uncharacterized protein LOC111488623 OS=Cucurbita maxima OX=3661 GN=LOC111488623...	[more]
A0A6J1GN79	8.7e-08	93.75	uncharacterized protein LOC111456051 OS=Cucurbita moschata OX=3662 GN=LOC1114560...	[more]
A0A5A7TEN6	3.3e-07	93.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cmc11g0313461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.80.10.50		coord: 1..35 e-value: 3.0E-5 score: 25.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0313461.1	Cmc11g0313461.1	mRNA