Cmc11g0312971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0312971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	pre-mRNA-processing factor 39-like
Location	CMiso1.1chr11: 32445352 .. 32449968 (+)
RNA-Seq Expression	Cmc11g0312971
Synteny	Cmc11g0312971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTCATGATGTGTTTGTTCAGTAATTTTTTATTCTTTTTAAAACTCCAATGTTATGCATGCAGGTATCTTATCTTCCTAACCATCTGTTGTCATGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACCGAGGAGTATTTCTGTTGCATATCTCTTTTCTGTTTCTTATCACATCTTTACATTATGAATTTAAATGTAAAGACCGTTTTATATGTTTTTCCATTTTTTGCTCGAATTTTTTTTTGTGAACAGGTGGTGAAATTGTACGAGAGATGTGTGATTGCTTGTGCCAACTATCCTGAGTACTGGATACGGTATATTTTGTGCATGCAAGCAAGTGATAGTATGGATCTTGCCAATAATGCCCTTGCTCGGGCAAGCCAAGTTTTTGTCAAGGTAGGCAACAGATGCATCTGCCTTTTTCATCACCTATGATTACTGCTGGAGTTATCATGACTAAGAATGACCCAATCTTGATCATATGTTGCTAATGATTTATTTTCCTTGTTACCCATTCCATGCATGCAAGCATAGAATTATTGTGTACCAACCCTTTTACCTTATATTTATTTACATGTGGTTCCTCCTTTCTTTTTGCTATAGAGAATCCTACCATATGACCGTAAAAAGTATGCTAGCTGTATTATAATAGATGCCCCATGACTAAGTTTGTCAACAGCTACCCCATTTTTCATGAGATATTGTTGTCGTCTATGATGTGCATGAAGTGGGAAATTTTTCTTCAGTTAGTAAATAAATTTAGATTTATGTTAACATGGACATTTTCCCAAACTTTCAACAGAGGCGACCAGAGATTCATTTATTTGCTGCCCGGTTCAAGGAGCAAAATGGAGACATTACTGGTGCTCGTGCGTCCTATCAACTTGTGCATAGTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAATATGGAACATCGTTTGGTAAGTTCTATTAAATAAGTTCTGATACATATTTTGATGCGTTCTTTTTCTAATTTGGTGGTTGGAATTTTTAGGGAAACCTGGAAGATGCATACTCTGTATATGAACAGGCTATTGCTATTGAACGAGGGAAAGAACATTCTCGTGCATTACCACTGTTATATGCTCAGTACTCAAGGTTTCAGAACTTGGTATGCTGGCGGAAATTGTGGTCCCTGCACTGCTGAGTCTGTTTACATAATTATGCATTTTGCATTTGATTTTTCTTGTTTTTGTTACTGCTTCTTTGCACCTCTAACTTGAATGGTGAGTATTAGTCTTTAGTTATCTGATCTTAGAAATTAGGAGCATAAGACTTACAGTATGCCTACATGCAAGAGAGCAAAAAAGTTCAAACAGAAAAAGAGGGATTGTTATTTTGTGAAGGAAGGTTCTTGATGCAACAAGGAGAGGAGGATATGTGGTGCAGCTGAGAAAATCTTTAAGGAACACTCAAAGTAGTATTTTATTATGATTAAAAAAAATTTACCAATAGAAAGGATGGAAAGGATGAAGCCTCTACTTTGTACACATCTATGTATGTTTTGGTGTAAATGCACTTCATATTTTTGTGATTACTATCTTACTGCTCTTATAGCTGAATGGAATAGCAATATGCAGTTTCTCATGGCTCTTTTGCCATTTTGTTATTTCATAATAATTTCATAATATCAATGAAATTATGATTGTATGTTTCTCGTAAAAACCGATGAACACTGTACTTGATTATACTCTCGAGAAGAACATGTCCTGTCTCTGCTAATCATATCTACAATCATTTCTTATTTGGGTTCTATTTTGTCTTGGTGCGGATGATTCTGTGTGGGTCTCTTTAGGCCATGGGTTGGGGTCATTTTACTCCTTGAGTTATGTGTAACTCCTTTCTGCAGAGTAGTTATTGCTGTGGCTTCTATCTATATATTTGGTCGTTGATGACTTGAGGATCTTCAATAATCTGGTTATGTTATCAATTTTCTTCCAAGAGTTAAAGAAGCTAAAAAACTTTCTTATGTAAACTCAGACCAGTACAATCTGTGTAAGAAGTATTTTCATAGGATTTGTCTGGAATTTAATCAATACACATTTTTGTGGTTCTCGCTAATGAATATTAATATTCTCATTTTTCTTCTCCATTTAGGAAATTGGGCTACTAAATATTCTAGTTGTAGCTGTAGTTAGTAAAATTTGCAAATATTTATTTTACTGGCCATTGATATTTTTCTGTTGATACTGATGCACGGCTTATTAATTGAAGTATTCCATAGCTGATCAATAAGTTCCATTCATACTAAATTAAGGAAGCTGGCTATTTTCACTTTGGTCTGTGCTCAATTTTTTAAGCAGTTTTAGTACTTGTTCATTTTCTATTGAACAGTCTCCTGGGGCATGTGATCAGCTGGAAATGGCATCTTTCTTGAATTTTGAAGTGTTTTTTTTTTATTGAATGTGTTGACAGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTGTCCAAACCACTTATTGAGGTACTCTCTTTTCTCTATTTGAAACATTTGAATTTTTCTCTCATAAGCGTCGTTTTCATGTGGTTAAATGTATACCTGTTTGCCTCCATGATACATCCAGGCCTTGATACATTTTGAGGCAATTCAGTCTACGACAAAGAGAATTGATTATTTAGATTCATTAGTTGAAAAGGTCATAGTGCCCAACACAGAGAATGCGACAGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCGAGCATTTTCTTGGAGGTACGAATAAAGTTTTCATGTTTGCAGGGGAAAAACTTTTGAGGGTTGATAGGCGTAATTACTCATTGCAAGTTACATGTGAAGAATCAATTCTAGTATACTACTAACTGTTGCTTTATGTTTTTCGGTCTAACATTGAGACAGTTTGATATAAGATTATCTAGTTATAAAGGTCTCTTGTTTTTCCACCTTACTCTGGATCTCACTGTCTCTTTGGAGTTGTCAATATTTCCATAGCATGTATGATACTCTGGGACAAAACTACACTGAGTTGAAGTATTTCGAAGGAAGAAAATTTGTATTGGATGATACTGAAAACTGGAAGTAGATGCTCATGACATGAAATCTTTTTTACGTTTTGTTGATTTGGAAATCTTTCTAGCATTGAAATATGTTGGATCGAGTTTTGCTGAACATGCTGATCAATGATTTTGCAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGTAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCCTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTGGCTTCACCAGCACAATCTTTGATGGGTGTTTATCCAACTGGTCAAAATCAATGGGCAGCTAGCTATGGAGTACAACCACAAGCTTGGCCTCCTGTCGCTCAAGCACAGGGTCAACAATGGGCACCGGGTTATACTCAATCGGTAAGACCATCTTTCATCCCTTTTGTTTTAAAATTAATACATGTCATGAAATTTATGTGGAAACGTTGCATACAAATTATTTAATCACTCTTGCTGTGTTTTTTACCCGTGCAGGAGAATTTTCATGAATAGCAAAATATTAAAACTATTTACAAAATATAGCAAAATTTATTCATCTCTAGCCTATTTTTGCTATTATGTGTAAATAGTTTTAATATTTTTCTACTTTTAAAAATGTTCCTTTAAATTATTTTTTTTTCATATACTTTCTACCTTTCCAGAAAAATAATTAGTCATTTTGGATATATGGGGCATGCTTTGATTTTAAGGTTGCAATTTCCAATATTCATGAGGAAAATTGAGGGTATTTTAATTTCTCCTGCAAACATGGACGAAAAAGTAAAGAATAGAAAAAGAATAACCCTCGTGTGTTTCTTCCCATCTACTTAATTACAGGCCTCGTATAGTGGGTATGGAAGCACATACACGAATCCACAAGTGTCAACATCGGTGTCACAAGCCTCCACTTACGCCACGTATCCTCCTACATACCCTGCCCAGGTATTAAATCGTCATCTCTGGTGAATTTCAAATATTTAGGCTTTCTGATAAATCACCACCACTTCCACCTATGTATTTATTGACGTATTGTGCTAATTTTCAGCAGCAGGCGTATTCTGCTCAGACTTATGCCCAACCAACTGCGCAAGCAACAGTAGCACCATCACAGCAGACGGCTTCAGTCGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGAGAAAGGGTATTAGTATTCGTAATTGTAATCTAAAATTTTCCCCTTACGTACGAATACGATCTACTTACATCCTGTACCTTTGATTTTTAGGGACATGGGTATGGTATAGTATAGCTAACACAAAAGTAGGGGACAGTTCTAGAATCTTCTTCCTAATTCTTCGTGTCTTTTAATTTTTGTTGTGCCAATGATTAGGGGTTTGGATATCAGAATTTATCATTGCCAAGTAGTCAGGAGAGGTAATGAATTCAACCAACACTGTTTCTTGTGAAAATTGTTTGGTTGTTATATCTGTATG

mRNA sequence

GGTTCATGATGTGTTTGTTCAGTAATTTTTTATTCTTTTTAAAACTCCAATGTTATGCATGCAGGTATCTTATCTTCCTAACCATCTGTTGTCATGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACCGAGGAGTATTTCTGTTGCATATCTCTTTTCTGTTTCTTATCACATCTTTACATTATGAATTTAAATGTAAAGACCGTTTTATATGTTTTTCCATTTTTTGCTCGAATTTTTTTTTGTGAACAGGTGGTGAAATTGTACGAGAGATGTGTGATTGCTTGTGCCAACTATCCTGAGTACTGGATACGGTATATTTTGTGCATGCAAGCAAGTGATAGTATGGATCTTGCCAATAATGCCCTTGCTCGGGCAAGCCAAGTTTTTGTCAAGAGGCGACCAGAGATTCATTTATTTGCTGCCCGGTTCAAGGAGCAAAATGGAGACATTACTGGTGCTCGTGCGTCCTATCAACTTGTGCATAGTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAATATGGAACATCGTTTGGGAAACCTGGAAGATGCATACTCTGTATATGAACAGGCTATTGCTATTGAACGAGGGAAAGAACATTCTCGTGCATTACCACTGTTATATGCTCAGTACTCAAGGTTTCAGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTGTCCAAACCACTTATTGAGGCCTTGATACATTTTGAGGCAATTCAGTCTACGACAAAGAGAATTGATTATTTAGATTCATTAGTTGAAAAGGTCATAGTGCCCAACACAGAGAATGCGACAGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCGAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGTAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCCTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTGGCTTCACCAGCACAATCTTTGATGGGTGTTTATCCAACTGGTCAAAATCAATGGGCAGCTAGCTATGGAGTACAACCACAAGCTTGGCCTCCTGTCGCTCAAGCACAGGGTCAACAATGGGCACCGGGTTATACTCAATCGGCCTCGTATAGTGGGTATGGAAGCACATACACGAATCCACAAGTGTCAACATCGGTGTCACAAGCCTCCACTTACGCCACGTATCCTCCTACATACCCTGCCCAGCAGCAGGCGTATTCTGCTCAGACTTATGCCCAACCAACTGCGCAAGCAACAGTAGCACCATCACAGCAGACGGCTTCAGTCGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGAGAAAGGGTATTAGTATTCGTAATTGTAATCTAAAATTTTCCCCTTACGTACGAATACGATCTACTTACATCCTGTACCTTTGATTTTTAGGGACATGGGTATGGTATAGTATAGCTAACACAAAAGTAGGGGACAGTTCTAGAATCTTCTTCCTAATTCTTCGTGTCTTTTAATTTTTGTTGTGCCAATGATTAGGGGTTTGGATATCAGAATTTATCATTGCCAAGTAGTCAGGAGAGGTAATGAATTCAACCAACACTGTTTCTTGTGAAAATTGTTTGGTTGTTATATCTGTATG

Coding sequence (CDS)

ATGATGTGTTTGTTCAGTAATTTTTTATTCTTTTTAAAACTCCAATGTTATGCATGCAGGTATCTTATCTTCCTAACCATCTGTTGTCATGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACCGAGGAGTATTTCTGTTGCATATCTCTTTTCTGTTTCTTATCACATCTTTACATTATGAATTTAAATGTAAAGACCGTTTTATATGTTTTTCCATTTTTTGCTCGAATTTTTTTTTGTGAACAGGTGGTGAAATTGTACGAGAGATGTGTGATTGCTTGTGCCAACTATCCTGAGTACTGGATACGGTATATTTTGTGCATGCAAGCAAGTGATAGTATGGATCTTGCCAATAATGCCCTTGCTCGGGCAAGCCAAGTTTTTGTCAAGAGGCGACCAGAGATTCATTTATTTGCTGCCCGGTTCAAGGAGCAAAATGGAGACATTACTGGTGCTCGTGCGTCCTATCAACTTGTGCATAGTGAAATTTCACCTGGCCTTCTTGAAGCAATTATTAAGCATGCTAATATGGAACATCGTTTGGGAAACCTGGAAGATGCATACTCTGTATATGAACAGGCTATTGCTATTGAACGAGGGAAAGAACATTCTCGTGCATTACCACTGTTATATGCTCAGTACTCAAGGTTTCAGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTGGATAAGGCAGTTGAGCATGGTGAATTGTCCAAACCACTTATTGAGGCCTTGATACATTTTGAGGCAATTCAGTCTACGACAAAGAGAATTGATTATTTAGATTCATTAGTTGAAAAGGTCATAGTGCCCAACACAGAGAATGCGACAGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCGAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCTGAGGACAGACATGTAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCCTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTGGCTTCACCAGCACAATCTTTGATGGGTGTTTATCCAACTGGTCAAAATCAATGGGCAGCTAGCTATGGAGTACAACCACAAGCTTGGCCTCCTGTCGCTCAAGCACAGGGTCAACAATGGGCACCGGGTTATACTCAATCGGCCTCGTATAGTGGGTATGGAAGCACATACACGAATCCACAAGTGTCAACATCGGTGTCACAAGCCTCCACTTACGCCACGTATCCTCCTACATACCCTGCCCAGCAGCAGGCGTATTCTGCTCAGACTTATGCCCAACCAACTGCGCAAGCAACAGTAGCACCATCACAGCAGACGGCTTCAGTCGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGA

Protein sequence

MMCLFSNFLFFLKLQCYACRYLIFLTICCHARRVPHFIFEGPLYSTEEYFCCISLFCFLSHLYIMNLNVKTVLYVFPFFARIFFCEQVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQTYAQPTAQATVAPSQQTASVAQPYYGSYYMNG

Homology

[Close]

BLAST of Cmc11g0312971 vs. NCBI nr
Match: XP_008459958.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo])

HSP 1 Score: 754.2 bits (1946), Expect = 6.8e-214
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 561 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 831

[Close]

BLAST of Cmc11g0312971 vs. NCBI nr
Match: XP_008459960.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Cucumis melo] >XP_008459961.1 PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Cucumis melo])

HSP 1 Score: 754.2 bits (1946), Expect = 6.8e-214
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 384 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 443

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 444 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 503

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 504 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 563

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 564 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 623

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 624 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 683

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 684 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 743

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 744 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 774

[Close]

BLAST of Cmc11g0312971 vs. NCBI nr
Match: XP_008459959.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo])

HSP 1 Score: 748.0 bits (1930), Expect = 4.9e-212
Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 561 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA QQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA-QQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 830

[Close]

BLAST of Cmc11g0312971 vs. NCBI nr
Match: XP_011656772.1 (pre-mRNA-processing factor 39 isoform X3 [Cucumis sativus] >KAE8646740.1 hypothetical protein Csa_004856 [Cucumis sativus])

HSP 1 Score: 740.7 bits (1911), Expect = 7.8e-210
Identity = 384/391 (98.21%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 384 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 443

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDI GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 444 FKEQNGDIAGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 503

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRAL LLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQST KR
Sbjct: 504 EHSRALSLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTGKR 563

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 564 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 623

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAK+YPSVASPAQSLMGVYPT QNQWAASYGVQPQAWP
Sbjct: 624 HKSTSELKKRLADDYLASEKAKMAKTYPSVASPAQSLMGVYPTSQNQWAASYGVQPQAWP 683

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 684 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 743

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQ ASVAQPYYGSYYMNG
Sbjct: 744 YAQPTAQATVAPSQQPASVAQPYYGSYYMNG 774

[Close]

BLAST of Cmc11g0312971 vs. NCBI nr
Match: XP_004140574.1 (pre-mRNA-processing factor 39 isoform X1 [Cucumis sativus])

HSP 1 Score: 740.7 bits (1911), Expect = 7.8e-210
Identity = 384/391 (98.21%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDI GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDIAGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRAL LLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQST KR
Sbjct: 561 EHSRALSLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTGKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAK+YPSVASPAQSLMGVYPT QNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKTYPSVASPAQSLMGVYPTSQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQ ASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQPASVAQPYYGSYYMNG 831

[Close]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot
Match: Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 4.5e-19
Identity = 88/320 (27.50%), Postives = 150/320 (46.88%), Query Frame = 0


Query: 86  EQVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAA 145
           E+VV L+ERC+IACA Y E+WI+Y   ++ S S +   +   +A  V + ++P +HL  A
Sbjct: 445 ERVVVLFERCLIACALYEEFWIKYAKYLE-SYSTEAVRHIYKKACTVHLPKKPNVHLLWA 504

Query: 146 RFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERG 205
            F+EQ G I  AR+  + V   + PGL    ++  ++E R GN+E+A ++ + AI   R 
Sbjct: 505 AFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEALLQDAITNGRN 564

Query: 206 KEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTK 265
              S        + +R    V K+ G+A+++L +AVE  E +  L   L+  E      +
Sbjct: 565 SSES---SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLLELEYSGDVQQ 624

Query: 266 RIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHVKLF 325
               + +  ++ +  +    + ++ S R+      ++FL  FG D+ ++  A ++H +L 
Sbjct: 625 NEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLMAAYEQHQRLL 684

Query: 326 ISHKSTSELKKRLADDYLASEKAKMAKS-YPSVASPAQSLMGVYPTG------------- 385
              +S     KR A++      AK  ++   SVAS     M     G             
Sbjct: 685 AEQESF----KRKAENGSEEPDAKRQRTDDQSVASGQMMDMQANHAGYNYNNWYQYNSWG 744

Query: 386 -QNQWA--ASYGVQPQAWPP 388
            QN W     YG   Q +PP
Sbjct: 745 SQNSWGQYGQYGQYNQYYPP 749

[Close]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot
Match: Q4KLU2 (Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.5e-19
Identity = 79/265 (29.81%), Postives = 138/265 (52.08%), Query Frame = 0


Query: 86  EQVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAA 145
           E++V L+ERCVIACA Y E+WI+Y   M+ + S++   +   RA  V + ++P +HL  A
Sbjct: 341 ERIVILFERCVIACACYEEFWIKYAKYME-NHSVEGVRHVYNRACHVHLAKKPMVHLLWA 400

Query: 146 RFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERG 205
            F+EQ G++  AR   + + + I  GL    ++  N+E R GN+++A  + E+A+     
Sbjct: 401 AFEEQQGNLEEARRILKNIETAIE-GLAMVRLRRVNLERRHGNVKEAEHLLEEAM----N 460

Query: 206 KEHSRALPLLYA-QYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTT 265
           K  + +    YA + +R    V  N  KAR++L  A++  + +  L   L+  E      
Sbjct: 461 KTKTSSESSFYAIKLARHLFKVQANVVKARKVLSNAIQKDKENTKLYLNLLEMEYNCDIK 520

Query: 266 KRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHVKL 325
           +  + + +  +K I       + +S +MR + S   +EFL  FG DV  +    + H KL
Sbjct: 521 QNEENILAAFDKAI------KSPMSIAMRVKFSQRKVEFLEDFGSDVNKLLDTYNEHQKL 580

Query: 326 FISHKSTSELKKRLADDYLASEKAK 349
            + H+   ++ KR A++ L   +AK
Sbjct: 581 -LKHQ---DIVKRKAENGLEQPEAK 589

[Close]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot
Match: Q86UA1 (Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3)

HSP 1 Score: 94.4 bits (233), Expect = 3.8e-18
Identity = 80/282 (28.37%), Postives = 136/282 (48.23%), Query Frame = 0


Query: 86  EQVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAA 145
           E+VV L+ERCVI+CA Y E+WI+Y   M+ + S++   +  +RA  + + ++P +H+  A
Sbjct: 370 ERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLWA 429

Query: 146 RFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERG 205
            F+EQ G+I  AR +      E   GL    ++  ++E R GNLE+A  + + AI   + 
Sbjct: 430 AFEEQQGNINEAR-NILKTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAKS 489

Query: 206 KEHSRALPLLYA-QYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTT 265
              S      YA + +R    + KN  K+R++L +A+E  + +  L   L+  E      
Sbjct: 490 NNESS----FYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDLK 549

Query: 266 KRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHVKL 325
           +  + + +  +K +  +      +   MR   S   +EFL  FG DV  +  A D H  L
Sbjct: 550 QNEENILNCFDKAVHGS------LPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTL 609

Query: 326 FISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMG 366
                S     KR A++     + K A +  + +S  Q + G
Sbjct: 610 LKEQDSL----KRKAENGSEEPEEKKAHTEDTTSSSTQMIDG 635

[Close]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot
Match: Q8K2Z2 (Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 2.5e-17
Identity = 82/282 (29.08%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 86  EQVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAA 145
           E+VV L+ERCVI+CA Y E+WI+Y   M+ + S++   +  +RA  V + ++P  H+  A
Sbjct: 368 ERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLWA 427

Query: 146 RFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERG 205
            F+EQ G+I  AR   +    E   GL    ++  ++E R GN+E+A  + + AI   + 
Sbjct: 428 AFEEQQGNINEARIILR-TFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKS 487

Query: 206 KEHSRALPLLYA-QYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTT 265
              S      YA + +R    + KN  K+R++L +A+E  + +  L   L+  E      
Sbjct: 488 NNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDLK 547

Query: 266 KRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHVKL 325
           +  + + +  +K I  +      +   MR   S   +EFL  FG DV  +  A D H  L
Sbjct: 548 QNEENILNCFDKAIHGS------LPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTL 607

Query: 326 FISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMG 366
               K    LK++  +    SE+ +  K++    S AQ + G
Sbjct: 608 L---KEQDTLKRKAEN---GSEEPEEKKAHTEDLSSAQIIDG 631

[Close]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot
Match: Q7KRW8 (Pre-mRNA-processing factor 39 OS=Drosophila melanogaster OX=7227 GN=CG1646 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-10
Identity = 78/350 (22.29%), Postives = 143/350 (40.86%), Query Frame = 0


Query: 86   EQVVKLYERCVIACANYPEYWIRYILCMQA----SDSMDLANNALARASQVFVKRRPEIH 145
            E+V+ L+ERC+IACA Y E+W++ +  +++    S  +DL  +   RA ++    +P +H
Sbjct: 722  ERVLVLFERCLIACALYDEFWLKMLRYLESLEDQSGVVDLVRDVYRRACRIHHPDKPSLH 781

Query: 146  LFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIA 205
            L  A F+E   +   A    Q +  +  P LL+   +  N+E R G L+    +Y+  I 
Sbjct: 782  LMWAAFEECQMNFDDAAEILQRI-DQRCPNLLQLSYRRINVERRRGALDKCRELYKHYIE 841

Query: 206  IERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQ 265
              + K  + +L +   +Y+RF N +C +       L +A+E    +  +   +I     +
Sbjct: 842  STKNKGIAGSLAI---KYARFLNKICHDLDAGLAALQQALERDPANTRVALQMIDLCLQR 901

Query: 266  STTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHV 325
                  + ++ + + +   + E    V  + R+      +EFL  FG      +   R +
Sbjct: 902  PKVDEQEVVEIMDKFMARADIEPDQKVLFAQRK------VEFLEDFGSTARGLQDAQRAL 961

Query: 326  KLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQ 385
            +  ++                A E  K +   PS  + + S  G  PTG    A + G  
Sbjct: 962  QQALTK---------------AKEAQKKSDGSPSRKNSSSSKEGPVPTGSAAAAYNNGGS 1021

Query: 386  PQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATY 432
              A              GY   A+   YG   T     +   Q ++Y +Y
Sbjct: 1022 AAA------------VAGYNYGAANPYYGQQNTAAAYPSQTPQQASYDSY 1034

[Close]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL
Match: A0A1S3CCM2 (pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 3.3e-214
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 384 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 443

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 444 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 503

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 504 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 563

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 564 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 623

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 624 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 683

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 684 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 743

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 744 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 774

[Close]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL
Match: A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 3.3e-214
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 561 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 831

[Close]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL
Match: A0A1S3CBV2 (pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.4e-212
Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 561 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA QQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA-QQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQTASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 830

[Close]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL
Match: A0A0A0KF31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088040 PE=4 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 3.8e-210
Identity = 384/391 (98.21%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDI GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDIAGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRAL LLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQST KR
Sbjct: 561 EHSRALSLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTGKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAK+YPSVASPAQSLMGVYPT QNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKTYPSVASPAQSLMGVYPTSQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQPYYGSYYMNG 478
           YAQPTAQATVAPSQQ ASVAQPYYGSYYMNG
Sbjct: 801 YAQPTAQATVAPSQQPASVAQPYYGSYYMNG 831

[Close]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL
Match: A0A5A7TF58 (Pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001600 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 3.3e-206
Identity = 380/382 (99.48%), Postives = 381/382 (99.74%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR
Sbjct: 441 KVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 500

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
           FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK
Sbjct: 501 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 560

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR
Sbjct: 561 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 620

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS
Sbjct: 621 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 680

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP
Sbjct: 681 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 740

Query: 387 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQT 446
           PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA QQAYSAQT
Sbjct: 741 PVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA-QQAYSAQT 800

Query: 447 YAQPTAQATVAPSQQTASVAQP 469
           YAQPTAQATVAPSQQTASVAQP
Sbjct: 801 YAQPTAQATVAPSQQTASVAQP 821

[Close]

BLAST of Cmc11g0312971 vs. TAIR 10
Match: AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 458.0 bits (1177), Expect = 9.4e-129
Identity = 246/397 (61.96%), Postives = 295/397 (74.31%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCV+ CANYPEYWIRY+  M+AS S DLA NALARA+QVFVK++PEIHLFAAR
Sbjct: 379 KVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPEIHLFAAR 438

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
            KEQNGDI GARA+YQLVHSEISPGLLEA+IKHANME+RLGNL+DA+S+YEQ IA+E+GK
Sbjct: 439 LKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGK 498

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALIHFEAIQ   + 
Sbjct: 499 EHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPRE 558

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+HVKLF  
Sbjct: 559 IDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYP 618

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ +   YP  Q QW+  Y  QPQ WP
Sbjct: 619 HRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWP 678

Query: 387 P--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYATYPPTYPAQQQA 446
           P   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y  YP       Q 
Sbjct: 679 PAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQT 738

Query: 447 YSAQTYAQPTAQA--TVAPSQQTASVAQP--YYGSYY 475
           Y  Q+YA P A A    AP QQ A+   P  YY +YY
Sbjct: 739 YPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 768

[Close]

BLAST of Cmc11g0312971 vs. TAIR 10
Match: AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 458.0 bits (1177), Expect = 9.4e-129
Identity = 246/397 (61.96%), Postives = 295/397 (74.31%), Query Frame = 0


Query: 87  QVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAAR 146
           +VVKLYERCV+ CANYPEYWIRY+  M+AS S DLA NALARA+QVFVK++PEIHLFAAR
Sbjct: 193 KVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPEIHLFAAR 252

Query: 147 FKEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGK 206
            KEQNGDI GARA+YQLVHSEISPGLLEA+IKHANME+RLGNL+DA+S+YEQ IA+E+GK
Sbjct: 253 LKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGK 312

Query: 207 EHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKR 266
           EHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALIHFEAIQ   + 
Sbjct: 313 EHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPRE 372

Query: 267 IDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFIS 326
           IDYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+HVKLF  
Sbjct: 373 IDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYP 432

Query: 327 HKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWP 386
           H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ +   YP  Q QW+  Y  QPQ WP
Sbjct: 433 HRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWP 492

Query: 387 P--VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYATYPPTYPAQQQA 446
           P   A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y  YP       Q 
Sbjct: 493 PAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQT 552

Query: 447 YSAQTYAQPTAQA--TVAPSQQTASVAQP--YYGSYY 475
           Y  Q+YA P A A    AP QQ A+   P  YY +YY
Sbjct: 553 YPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 582

[Close]

BLAST of Cmc11g0312971 vs. TAIR 10
Match: AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-128
Identity = 246/396 (62.12%), Postives = 294/396 (74.24%), Query Frame = 0


Query: 88  VVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARF 147
           VVKLYERCV+ CANYPEYWIRY+  M+AS S DLA NALARA+QVFVK++PEIHLFAAR 
Sbjct: 435 VVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPEIHLFAARL 494

Query: 148 KEQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKE 207
           KEQNGDI GARA+YQLVHSEISPGLLEA+IKHANME+RLGNL+DA+S+YEQ IA+E+GKE
Sbjct: 495 KEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGKE 554

Query: 208 HSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRI 267
           HS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALIHFEAIQ   + I
Sbjct: 555 HSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPREI 614

Query: 268 DYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISH 327
           DYL+ LVEKVI P+ +   + S++ REELS I++EFL +FGDV+SIKKAED+HVKLF  H
Sbjct: 615 DYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPH 674

Query: 328 KSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPP 387
           +STSELKKR ADD+LAS++ KMAK+Y +   PAQ +   YP  Q QW+  Y  QPQ WPP
Sbjct: 675 RSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPP 734

Query: 388 --VAQAQGQQWAPGYTQSASYSGYG---STYTNPQVSTSVSQASTYATYPPTYPAQQQAY 447
              A AQ QQW P Y Q A+Y  YG   + YT PQ  T V QA+ Y  YP       Q Y
Sbjct: 735 AQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQTY 794

Query: 448 SAQTYAQPTAQA--TVAPSQQTASVAQP--YYGSYY 475
             Q+YA P A A    AP QQ A+   P  YY +YY
Sbjct: 795 PTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 823

[Close]

BLAST of Cmc11g0312971 vs. TAIR 10
Match: AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-43
Identity = 93/247 (37.65%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 89  VKLYERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFK 148
           + LYERC+I CANY E+W RY+  +++    +LAN ALARASQ FVK    IHLF ARFK
Sbjct: 318 INLYERCLIPCANYTEFWFRYVDFVESKGGRELANFALARASQTFVKSASVIHLFNARFK 377

Query: 149 EQNGDITGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAI-AIERGKE 208
           E  GD + A  +      E+  G +E + K ANME RLGN E A + Y +A+     GKE
Sbjct: 378 EHVGDASAASVALSRCGEELGFGFVENVTKKANMEKRLGNFEAAVTTYREALNKTLIGKE 437

Query: 209 HSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRI 268
           +      LY Q+SR + ++  +   A +IL +  E+    K L+E L+    +   ++++
Sbjct: 438 NLETTARLYVQFSRLKYVITNSADDAAQILLEGNENVPHCKLLLEELMRLLMMHGGSRQV 497

Query: 269 DYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISH 328
           D LD +++K +    +++  +SA  +EE+S++++EF++L G +  ++KA  RH+KLF  H
Sbjct: 498 DLLDPIIDKELSHQADSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALGRHIKLF-PH 557

Query: 329 KSTSELK 335
            + ++L+
Sbjct: 558 SARAKLR 563

The following BLAST results are available for this feature:

BLAST of Cmc11g0312971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459958.1	6.8e-214	99.74	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo]	[more]
XP_008459960.1	6.8e-214	99.74	PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Cucumis melo] >XP_008459961...	[more]
XP_008459959.1	4.9e-212	99.49	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo]	[more]
XP_011656772.1	7.8e-210	98.21	pre-mRNA-processing factor 39 isoform X3 [Cucumis sativus] >KAE8646740.1 hypothe...	[more]
XP_004140574.1	7.8e-210	98.21	pre-mRNA-processing factor 39 isoform X1 [Cucumis sativus]	[more]

BLAST of Cmc11g0312971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1JPZ7	4.5e-19	27.50	Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2	[more]
Q4KLU2	4.5e-19	29.81	Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1	[more]
Q86UA1	3.8e-18	28.37	Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3	[more]
Q8K2Z2	2.5e-17	29.08	Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3	[more]
Q7KRW8	2.2e-10	22.29	Pre-mRNA-processing factor 39 OS=Drosophila melanogaster OX=7227 GN=CG1646 PE=1 ...	[more]

BLAST of Cmc11g0312971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCM2	3.3e-214	99.74	pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921...	[more]
A0A1S3CBE2	3.3e-214	99.74	pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921...	[more]
A0A1S3CBV2	2.4e-212	99.49	pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921...	[more]
A0A0A0KF31	3.8e-210	98.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088040 PE=4 SV=1	[more]
A0A5A7TF58	3.3e-206	99.48	Pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Cmc11g0312971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04080.1	9.4e-129	61.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04080.2	9.4e-129	61.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04080.3	1.6e-128	62.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46400.1	3.5e-43	37.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 83..115 e-value: 1.7 score: 17.6 coord: 228..260 e-value: 340.0 score: 4.2 coord: 187..222 e-value: 230.0 score: 5.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 80..357 e-value: 3.1E-43 score: 150.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 88..334
None	No IPR available	PANTHER	PTHR17204	PRE-MRNA PROCESSING PROTEIN PRP39-RELATED	coord: 86..457

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0312971.1	Cmc11g0312971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
molecular_function	GO:0005515	protein binding