Cmc11g0311971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0311971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr11: 31796561 .. 31799245 (-)
RNA-Seq Expression	Cmc11g0311971
Synteny	Cmc11g0311971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAAAATATTTGTTGAAATTTAGTAGTTAAGAGGCGCGCTGTCACCCCGCGATTTCCATTGCAGGGAATCAGCTGAAGAGTTTCCGTCTCCGCGAAAAGGAGGAAGCCATATTCTTAGCCAAATTCGATCAAAGATACTTATTTTCAAGCGCTGAAGTTGACTATAAGATAGGACACAAAATCCCACCTAGCTGGTAAATTTCAAAGCTCTCAACTTTCTGTCTGCCCATCAGGTGTTTGTCAAAAAGTCTTGCCTAAAATTCGTCAAATTTCTCTTCATTTTTGCTGAAGTTGGATAAGGTTTGGTCACTTGTTTCAAATATAAGTCTGTTATTGATTAAACATACACTAATTAAGTAGGTATGACTGTTAGGTGGCCAAGGATTTTAACGCCCACATATTTATCTCAGATTATTAGGAAGCAGAATAATCCCTTAACAGCTTACCAACTGTTTAAGGAAGCCAAGTGTAGGTACCCAGATTATCGGCACAATGGTCCAGTGTATGCCGCAATGATCAATATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGCCTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTGGAAATCCTGTTGAATGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAATCTGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCTCGAAAGGGTAGTGGAGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGCAAGCTGTGGAAATACTCGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCTCATTACCGAATCGACTTAGATCAATGCCGGAATAACAAGCTCACCATCGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGTCACATGATCGCTAAAGGCTTCAGGCCACCGTCCTCGATCTATGAAGCGAAAGTAGCTTCATTATGCAAAGAAGGCAAAGTTGATGATGCGGTCAAAGTAATTGAAGAGCAAATAGTGGGAAGTTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACCGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGAAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCGCGAAAATCGATATACTGAAGCATGTAAGGTTCTAGAGGAGATGGTTATCAAATCGTTTTGGCCTTGTTCTAACACATTCAATACGCTTATCAAAGGTCTTTGCTCAGTTGGAAAACAATATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCGATGTGGCTGGCATCGATATGTGCTCCAAGGTTTTATGACATCAAAAATCATTGTTGATGCTGGAATATTTACTATAAAATCACATTTAGGTACCAAATTTTTCTTTCAAAATATCTATTTTGATTCTAGAACTTCGGTAAATAATCATTTTTCCTTTTCTTTTTCTAGTTATTCTAGAATGCATATATAAACAGGTTGGGATGAACTTATATCGAATCCCATGTATACTAGGAGGTGAGGTAGATATTTGACGAGGAAGGGCCGAAATGGATAGTTTCTAATTTTATGAACTCAAATAGGCATTTTAAAAGTTCAAAATGAAATAATAGAAGCTCTCCGAAGTTGAAAGGAAGATTTTTTGAACCTTTATAGTAATGGAACATAAGGTTTGATTGTTTGATTGTTGAACTCCCCTCATGTCTGATTAACTCTCTGCCATTGTAGAGGGTTAAGCTCATTGTTCATACTTTGAATGACATTTCATTTTTGTTTTCATTTTTTGGGATTGAAGATGGAGATGAAGAAGATCCAAAGCAAATAGAATTCAATCCATTTCCTGGGTGTCTATAGATTGTGAGAAAAAAAAACACACACACATATGTATGTGAAGTTCAGTTATAAAAAATTGAACAGTTCAAAAAAGGGCCCAACCGGGTTCGAACCGGTGACCTCTTGATCTGCAGTCAAATGCTCTACCACTGAGCTATAGACCCATTGTTGCAAATATTTCAATATTATTCAAATACATAAGTTAGTTTTCCAAATGTTTATTTTACTCATTTATTTTTTGTTGCGAATTTTTCGTGGCCATAATTCAATCCCACGTTTGAAGTGAACTCATTCCCTATCCATTAATTTTTCTTCT

mRNA sequence

TCCCAAAATATTTGTTGAAATTTAGTAGTTAAGAGGCGCGCTGTCACCCCGCGATTTCCATTGCAGGGAATCAGCTGAAGAGTTTCCGTCTCCGCGAAAAGGAGGAAGCCATATTCTTAGCCAAATTCGATCAAAGATACTTATTTTCAAGCGCTGAAGTTGACTATAAGATAGGACACAAAATCCCACCTAGCTGGTAAATTTCAAAGCTCTCAACTTTCTGTCTGCCCATCAGGTGTTTGTCAAAAAGTCTTGCCTAAAATTCGTCAAATTTCTCTTCATTTTTGCTGAAGTTGGATAAGATTATTAGGAAGCAGAATAATCCCTTAACAGCTTACCAACTGTTTAAGGAAGCCAAGTGTAGGTACCCAGATTATCGGCACAATGGTCCAGTGTATGCCGCAATGATCAATATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGCCTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTGGAAATCCTGTTGAATGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAATCTGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCTCGAAAGGGTAGTGGAGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGCAAGCTGTGGAAATACTCGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCTCATTACCGAATCGACTTAGATCAATGCCGGAATAACAAGCTCACCATCGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGTCACATGATCGCTAAAGGCTTCAGGCCACCGTCCTCGATCTATGAAGCGAAAGTAGCTTCATTATGCAAAGAAGGCAAAGTTGATGATGCGGTCAAAGTAATTGAAGAGCAAATAGTGGGAAGTTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACCGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGAAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCGCGAAAATCGATATACTGAAGCATGTAAGGTTCTAGAGGAGATGGTTATCAAATCGTTTTGGCCTTGTTCTAACACATTCAATACGCTTATCAAAGGTCTTTGCTCAGTTGGAAAACAATATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCGATGTGGCTGGCATCGATATGTGCTCCAAGGTTTTATGACATCAAAAATCATTGTTGATGCTGGAATATTTACTATAAAATCACATTTAGATGGAGATGAAGAAGATCCAAAGCAAATAGAATTCAATCCATTTCCTGGGTGTCTATAGATTGTGAGAAAAAAAAACACACACACATATGTATGTGAAGTTCAGTTATAAAAAATTGAACAGTTCAAAAAAGGGCCCAACCGGGTTCGAACCGGTGACCTCTTGATCTGCAGTCAAATGCTCTACCACTGAGCTATAGACCCATTGTTGCAAATATTTCAATATTATTCAAATACATAAGTTAGTTTTCCAAATGTTTATTTTACTCATTTATTTTTTGTTGCGAATTTTTCGTGGCCATAATTCAATCCCACGTTTGAAGTGAACTCATTCCCTATCCATTAATTTTTCTTCT

Coding sequence (CDS)

ATGATCAATATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGCCTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTGGAAATCCTGTTGAATGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAATCTGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCTCGAAAGGGTAGTGGAGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGCAAGCTGTGGAAATACTCGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCTCATTACCGAATCGACTTAGATCAATGCCGGAATAACAAGCTCACCATCGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGTCACATGATCGCTAAAGGCTTCAGGCCACCGTCCTCGATCTATGAAGCGAAAGTAGCTTCATTATGCAAAGAAGGCAAAGTTGATGATGCGGTCAAAGTAATTGAAGAGCAAATAGTGGGAAGTTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACCGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGAAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCGCGAAAATCGATATACTGAAGCATGTAAGGTTCTAGAGGAGATGGTTATCAAATCGTTTTGGCCTTGTTCTAACACATTCAATACGCTTATCAAAGGTCTTTGCTCAGTTGGAAAACAATATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCGATGTGGCTGGCATCGATATGTGCTCCAAGGTTTTATGA

Protein sequence

MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSLCCDVAGIDMCSKVL

Homology

[Close]

BLAST of Cmc11g0311971 vs. NCBI nr
Match: XP_016902498.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >XP_016902499.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >KAA0039806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK24691.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 905.6 bits (2339), Expect = 1.7e-259
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN
Sbjct: 51  MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 350

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV
Sbjct: 351 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 410

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL
Sbjct: 411 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 470

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCSKVL
Sbjct: 471 PHVCVWNSLVSSLCCDVAGIDMCSKVL 497

[Close]

BLAST of Cmc11g0311971 vs. NCBI nr
Match: XP_008459832.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis melo])

HSP 1 Score: 905.6 bits (2339), Expect = 1.7e-259
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL
Sbjct: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCSKVL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 447

[Close]

BLAST of Cmc11g0311971 vs. NCBI nr
Match: XP_004140638.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativus] >KGN46470.1 hypothetical protein Csa_005325 [Cucumis sativus])

HSP 1 Score: 873.6 bits (2256), Expect = 7.2e-250
Identity = 432/447 (96.64%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFN
Sbjct: 51  MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 350

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVG CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLV
Sbjct: 351 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 410

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLC ENRY EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQL
Sbjct: 411 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 470

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCS+VL
Sbjct: 471 PHVCVWNSLVSSLCCDVAGIDMCSRVL 497

[Close]

BLAST of Cmc11g0311971 vs. NCBI nr
Match: XP_011656819.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis sativus])

HSP 1 Score: 873.6 bits (2256), Expect = 7.2e-250
Identity = 432/447 (96.64%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 60

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 180

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 240

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 300

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVG CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 360

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLC ENRY EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQL
Sbjct: 361 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 420

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCS+VL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSRVL 447

[Close]

BLAST of Cmc11g0311971 vs. NCBI nr
Match: XP_038874865.1 (pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida])

HSP 1 Score: 837.0 bits (2161), Expect = 7.5e-239
Identity = 412/447 (92.17%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MI+ILGNSGRVSEMREV+DQMRDDSCECKDSVFSFAIKTYASHGLLEDGI+LFKSLG+FN
Sbjct: 51  MIDILGNSGRVSEMREVIDQMRDDSCECKDSVFSFAIKTYASHGLLEDGITLFKSLGKFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQL AACQLFQE SYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLNESQLDAACQLFQESSYGWAVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYP+RLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPSRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNG+IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIK LINEALI
Sbjct: 231 LLFALCDNGDIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKRLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDS+CAMAVDLYNEN+TDQGDKVVSHM+AKGFRPPSSI+EAKVA+LCKEGKVDD
Sbjct: 291 KGGIPSSDSFCAMAVDLYNENETDQGDKVVSHMVAKGFRPPSSIFEAKVAALCKEGKVDD 350

Query: 301 AVKVIEEQIV-GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTL 360
           AVKVIEE+IV GSCVPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVA+K TYSTL
Sbjct: 351 AVKVIEEEIVKGSCVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVADKGTYSTL 410

Query: 361 VHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQ 420
           VHGLCRENRY EACKVLEEMVIKSFWPCSNTFNTLI+GLCSVGKQYEAVMWLEEMISQGQ
Sbjct: 411 VHGLCRENRYIEACKVLEEMVIKSFWPCSNTFNTLIRGLCSVGKQYEAVMWLEEMISQGQ 470

Query: 421 LPHVCVWNSLVSSLCCDVAGIDMCSKV 447
           LPHV VWNSLVSSLCCDVAG +M S+V
Sbjct: 471 LPHVSVWNSLVSSLCCDVAGTNMWSEV 497

[Close]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot
Match: Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 9.4e-144
Identity = 247/435 (56.78%), Postives = 329/435 (75.63%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MI+ILG S RV EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FN
Sbjct: 52  MIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFN 111

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           C N + +F+TLL+ ++ ES+L AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA
Sbjct: 112 CVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLA 171

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
             VFQEM+YQ CYP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KGSG DIV+YR 
Sbjct: 172 SQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI 231

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LL ALCD GE++ A+EILGKILRKGLKAPKR ++ I+     ++   IE +K L+ E LI
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLI 291

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           +G IP  DSY AMA DL+ E K  +G++V+  M +KGF P   IY AKV +LC+ GK+ +
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351

Query: 301 AVKVI-EEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTL 360
           AV VI +E + G C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+K+V  VAN+ETY TL
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411

Query: 361 VHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQ 420
           V GLCR+ ++ EA +V+EEM+IKS +P   T++ +IKGLC + ++YEAVMWLEEM+SQ  
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM 471

Query: 421 LPHVCVWNSLVSSLC 435
           +P   VW +L  S+C
Sbjct: 472 VPESSVWKALAESVC 486

[Close]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-44
Identity = 112/438 (25.57%), Postives = 211/438 (48.17%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLF-KSLGRF 60
           MI    NSG    + +++ ++R ++    +  F    + Y    L +  + LF + +  F
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 61  NCTNRTQTFNTLLEILLNESQLHAACQLFQ---ECSYGWEVKSRTQSLNLLMQSLCQRGQ 120
            C    ++FN++L +++NE   H   + +      +    +     S NL++++LC+   
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202

Query: 121 SELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIV 180
            + A+ VF+ M  + C P+  +Y  +M GLC++ R++EA+ LL  M      +G     V
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPSPV 262

Query: 181 IYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLIN 240
           IY  L+  LC  G++ +  +++  +  KG    +  +  +    C   KL  ++  SL+ 
Sbjct: 263 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSLLE 322

Query: 241 EALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEG 300
             +    IP+  +Y  +   L  + +     +++S M  +G+     IY   ++ L KEG
Sbjct: 323 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 382

Query: 301 KVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETY 360
           K ++A+ +  +     C P I +Y++++ GLC +GK   A E L +M    G + N  TY
Sbjct: 383 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTY 442

Query: 361 STLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMIS 420
           S+L+ G  +     EA +V +EM           ++ LI GLC VG+  EA+M   +M++
Sbjct: 443 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 502

Query: 421 QGQLPHVCVWNSLVSSLC 435
            G  P    ++S++  LC
Sbjct: 503 IGIKPDTVAYSSIIKGLC 513

[Close]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-40
Identity = 112/455 (24.62%), Postives = 223/455 (49.01%), Query Frame = 0


Query: 1   MINIL--GNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGR 60
           M+N+L  GNS ++ E+     +M     +   S F+  IK       L   I + + +  
Sbjct: 160 MLNLLVDGNSLKLVEISHA--KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 219

Query: 61  FNCTNRTQTFNTLLEILLNESQLHAACQLFQE-----CSYGWEVKSRTQSLNLLMQSLCQ 120
           +      +TF T+++  + E  L  A ++ ++     CS+         S+N+++   C+
Sbjct: 220 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS------NVSVNVIVHGFCK 279

Query: 121 RGQSELALHVFQEMDYQ-SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSG 180
            G+ E AL+  QEM  Q   +P++ ++  ++ GLC+ G +  AI ++  M     ++G  
Sbjct: 280 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML----QEGYD 339

Query: 181 GDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIK 240
            D+  Y +++  LC  GE+++AVE+L +++ +        +  +    C+ N+  +EE  
Sbjct: 340 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ--VEEAT 399

Query: 241 SLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASL 300
            L      KG +P   ++ ++   L          ++   M +KG  P    Y   + SL
Sbjct: 400 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 459

Query: 301 CKEGKVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVAN 360
           C +GK+D+A+ ++++  +  C  ++  YN ++ G C   K+  A E   +M +  G+  N
Sbjct: 460 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRN 519

Query: 361 KETYSTLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLE 420
             TY+TL+ GLC+  R  +A +++++M+++   P   T+N+L+   C  G   +A   ++
Sbjct: 520 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 579

Query: 421 EMISQGQLPHVCVWNSLVSSLCCDVAGIDMCSKVL 448
            M S G  P +  + +L+S L C    +++ SK+L
Sbjct: 580 AMTSNGCEPDIVTYGTLISGL-CKAGRVEVASKLL 598

[Close]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-38
Identity = 109/470 (23.19%), Postives = 214/470 (45.53%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRF 60
           +I  LG  G+   M EV+  MR++      + V+  A+K Y   G +++ +++F+ +  +
Sbjct: 46  VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105

Query: 61  NCTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSEL 120
           +C     ++N ++ +L++      A +++        +     S  + M+S C+  +   
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHA 165

Query: 121 ALHVFQEMDYQSCYPNRLSYLIVMKG---------------------------------- 180
           AL +   M  Q C  N ++Y  V+ G                                  
Sbjct: 166 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 225

Query: 181 -LCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILRK 240
            LC+ G + E   LL     ++ ++G   ++  Y   +  LC  GE++ AV ++G ++ +
Sbjct: 226 VLCKKGDVKECEKLLD----KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 285

Query: 241 GLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTD 300
           G K     +  +    C+N+K   +E +  + + + +G  P S +Y  +           
Sbjct: 286 GPKPDVITYNNLIYGLCKNSK--FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 345

Query: 301 QGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIVGSCVPTIALYNIVL 360
             +++V   +  GF P    Y + +  LC EG+ + A+ +  E +     P + LYN ++
Sbjct: 346 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 405

Query: 361 KGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEACKVLEEMVIKSF 420
           KGL + G    A +   +M++K GL+   +T++ LV+GLC+    ++A  +++ M+ K +
Sbjct: 406 KGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 465

Query: 421 WPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSLC 435
           +P   TFN LI G  +  K   A+  L+ M+  G  P V  +NSL++ LC
Sbjct: 466 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

[Close]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.3e-38
Identity = 108/446 (24.22%), Postives = 195/446 (43.72%), Query Frame = 0


Query: 24  DSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEILL-NESQLH 83
           D C    SVF   +K+Y+   L++  +S+              ++N +L+  + ++  + 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 84  AACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCY--------- 143
            A  +F+E     +V     + N+L++  C  G  ++AL +F +M+ + C          
Sbjct: 188 FAENVFKEMLES-QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 247

Query: 144 --------------------------PNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRIS 203
                                     PN +SY +V+ GLC++GR+ E   +L  M    +
Sbjct: 248 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM----N 307

Query: 204 RKGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLT 263
           R+G   D V Y TL+   C  G   QA+ +  ++LR GL      +  +    C+   + 
Sbjct: 308 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM- 367

Query: 264 IEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEA 323
                  +++  ++G  P+  +Y  +      +   ++  +V+  M   GF P    Y A
Sbjct: 368 -NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 427

Query: 324 KVASLCKEGKVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKV 383
            +   C  GK++DA+ V+E+       P +  Y+ VL G C       A+   ++M +K 
Sbjct: 428 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK- 487

Query: 384 GLVANKETYSTLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEA 434
           G+  +  TYS+L+ G C + R  EAC + EEM+     P   T+  LI   C  G   +A
Sbjct: 488 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 547

[Close]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL
Match: A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 8.3e-260
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN
Sbjct: 51  MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 350

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV
Sbjct: 351 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 410

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL
Sbjct: 411 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 470

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCSKVL
Sbjct: 471 PHVCVWNSLVSSLCCDVAGIDMCSKVL 497

[Close]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL
Match: A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 8.3e-260
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN
Sbjct: 51  MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 350

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV
Sbjct: 351 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 410

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL
Sbjct: 411 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 470

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCSKVL
Sbjct: 471 PHVCVWNSLVSSLCCDVAGIDMCSKVL 497

[Close]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL
Match: A0A1S3CB38 (pentatricopeptide repeat-containing protein At1g05600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 8.3e-260
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL
Sbjct: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCSKVL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 447

[Close]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL
Match: A0A0A0K9Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1)

HSP 1 Score: 873.6 bits (2256), Expect = 3.5e-250
Identity = 432/447 (96.64%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFN
Sbjct: 51  MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CTNRTQTFNTLLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRT
Sbjct: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 350

Query: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360
           AVKVIEEQIVG CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLV
Sbjct: 351 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 410

Query: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420
           HGLC ENRY EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQL
Sbjct: 411 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 470

Query: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           PHVCVWNSLVSSLCCDVAGIDMCS+VL
Sbjct: 471 PHVCVWNSLVSSLCCDVAGIDMCSRVL 497

[Close]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL
Match: A0A6J1KU44 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=3661 GN=LOC111497651 PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 3.3e-224
Identity = 389/448 (86.83%), Postives = 423/448 (94.42%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MINILGNSGR+SEMREV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FN
Sbjct: 51  MINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFN 110

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           CT+RTQTFNTLLEILLNESQL AACQLFQ+ S+GWEVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 111 CTDRTQTFNTLLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELA 170

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
           LHVF+EMDYQSCYPNRLSYLI+MKGLCQDG+L+EAIHLLYSMFWRISRKGSGGDIVIYRT
Sbjct: 171 LHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRT 230

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LLFALCDNGEIEQAVEILGKIL+KGLK+PKRAHY IDL+ CR +KLT+ EIK LINEALI
Sbjct: 231 LLFALCDNGEIEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALI 290

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           KGGIPSSDSYCAMA+DLYNEN+TDQGDKVVSHM+AKGF PPSS+YEAK A+LCKEGKVDD
Sbjct: 291 KGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDD 350

Query: 301 AVKVIEEQIV-GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTL 360
           AVKVIEE+ V GSCVPT+ALYNIVL GLC  GKSTVAME+LKKMAK+VGLVA+KETYSTL
Sbjct: 351 AVKVIEEETVKGSCVPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTL 410

Query: 361 VHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQ 420
           VHGLCRENRYTEACK+LEEMVIKS WPCSNTFNTLI+GLCSVGK Y+AVM LEEMISQGQ
Sbjct: 411 VHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQ 470

Query: 421 LPHVCVWNSLVSSLCCDVAGIDMCSKVL 448
           LP + VWN+LVSSLC +VAG  M SKVL
Sbjct: 471 LPELSVWNALVSSLCFNVAGTFMWSKVL 498

[Close]

BLAST of Cmc11g0311971 vs. TAIR 10
Match: AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 511.5 bits (1316), Expect = 6.7e-145
Identity = 247/435 (56.78%), Postives = 329/435 (75.63%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MI+ILG S RV EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FN
Sbjct: 52  MIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFN 111

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           C N + +F+TLL+ ++ ES+L AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA
Sbjct: 112 CVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLA 171

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
             VFQEM+YQ CYP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KGSG DIV+YR 
Sbjct: 172 SQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI 231

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LL ALCD GE++ A+EILGKILRKGLKAPKR ++ I+     ++   IE +K L+ E LI
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLI 291

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           +G IP  DSY AMA DL+ E K  +G++V+  M +KGF P   IY AKV +LC+ GK+ +
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351

Query: 301 AVKVI-EEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTL 360
           AV VI +E + G C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+K+V  VAN+ETY TL
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411

Query: 361 VHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQ 420
           V GLCR+ ++ EA +V+EEM+IKS +P   T++ +IKGLC + ++YEAVMWLEEM+SQ  
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM 471

Query: 421 LPHVCVWNSLVSSLC 435
           +P   VW +L  S+C
Sbjct: 472 VPESSVWKALAESVC 486

[Close]

BLAST of Cmc11g0311971 vs. TAIR 10
Match: AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 511.5 bits (1316), Expect = 6.7e-145
Identity = 247/435 (56.78%), Postives = 329/435 (75.63%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60
           MI+ILG S RV EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FN
Sbjct: 52  MIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFN 111

Query: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120
           C N + +F+TLL+ ++ ES+L AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA
Sbjct: 112 CVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLA 171

Query: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180
             VFQEM+YQ CYP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KGSG DIV+YR 
Sbjct: 172 SQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI 231

Query: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240
           LL ALCD GE++ A+EILGKILRKGLKAPKR ++ I+     ++   IE +K L+ E LI
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLI 291

Query: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300
           +G IP  DSY AMA DL+ E K  +G++V+  M +KGF P   IY AKV +LC+ GK+ +
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351

Query: 301 AVKVI-EEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTL 360
           AV VI +E + G C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+K+V  VAN+ETY TL
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411

Query: 361 VHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQ 420
           V GLCR+ ++ EA +V+EEM+IKS +P   T++ +IKGLC + ++YEAVMWLEEM+SQ  
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDM 471

Query: 421 LPHVCVWNSLVSSLC 435
           +P   VW +L  S+C
Sbjct: 472 VPESSVWKALAESVC 486

[Close]

BLAST of Cmc11g0311971 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 182.2 bits (461), Expect = 9.3e-46
Identity = 112/438 (25.57%), Postives = 211/438 (48.17%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLF-KSLGRF 60
           MI    NSG    + +++ ++R ++    +  F    + Y    L +  + LF + +  F
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 61  NCTNRTQTFNTLLEILLNESQLHAACQLFQ---ECSYGWEVKSRTQSLNLLMQSLCQRGQ 120
            C    ++FN++L +++NE   H   + +      +    +     S NL++++LC+   
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202

Query: 121 SELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIV 180
            + A+ VF+ M  + C P+  +Y  +M GLC++ R++EA+ LL  M      +G     V
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPSPV 262

Query: 181 IYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLIN 240
           IY  L+  LC  G++ +  +++  +  KG    +  +  +    C   KL  ++  SL+ 
Sbjct: 263 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSLLE 322

Query: 241 EALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEG 300
             +    IP+  +Y  +   L  + +     +++S M  +G+     IY   ++ L KEG
Sbjct: 323 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 382

Query: 301 KVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETY 360
           K ++A+ +  +     C P I +Y++++ GLC +GK   A E L +M    G + N  TY
Sbjct: 383 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTY 442

Query: 361 STLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMIS 420
           S+L+ G  +     EA +V +EM           ++ LI GLC VG+  EA+M   +M++
Sbjct: 443 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 502

Query: 421 QGQLPHVCVWNSLVSSLC 435
            G  P    ++S++  LC
Sbjct: 503 IGIKPDTVAYSSIIKGLC 513

[Close]

BLAST of Cmc11g0311971 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 8.1e-42
Identity = 112/455 (24.62%), Postives = 223/455 (49.01%), Query Frame = 0


Query: 1   MINIL--GNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGR 60
           M+N+L  GNS ++ E+     +M     +   S F+  IK       L   I + + +  
Sbjct: 160 MLNLLVDGNSLKLVEISHA--KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 219

Query: 61  FNCTNRTQTFNTLLEILLNESQLHAACQLFQE-----CSYGWEVKSRTQSLNLLMQSLCQ 120
           +      +TF T+++  + E  L  A ++ ++     CS+         S+N+++   C+
Sbjct: 220 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS------NVSVNVIVHGFCK 279

Query: 121 RGQSELALHVFQEMDYQ-SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSG 180
            G+ E AL+  QEM  Q   +P++ ++  ++ GLC+ G +  AI ++  M     ++G  
Sbjct: 280 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML----QEGYD 339

Query: 181 GDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIK 240
            D+  Y +++  LC  GE+++AVE+L +++ +        +  +    C+ N+  +EE  
Sbjct: 340 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ--VEEAT 399

Query: 241 SLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASL 300
            L      KG +P   ++ ++   L          ++   M +KG  P    Y   + SL
Sbjct: 400 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 459

Query: 301 CKEGKVDDAVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVAN 360
           C +GK+D+A+ ++++  +  C  ++  YN ++ G C   K+  A E   +M +  G+  N
Sbjct: 460 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRN 519

Query: 361 KETYSTLVHGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLE 420
             TY+TL+ GLC+  R  +A +++++M+++   P   T+N+L+   C  G   +A   ++
Sbjct: 520 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 579

Query: 421 EMISQGQLPHVCVWNSLVSSLCCDVAGIDMCSKVL 448
            M S G  P +  + +L+S L C    +++ SK+L
Sbjct: 580 AMTSNGCEPDIVTYGTLISGL-CKAGRVEVASKLL 598

[Close]

BLAST of Cmc11g0311971 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-39
Identity = 109/470 (23.19%), Postives = 214/470 (45.53%), Query Frame = 0


Query: 1   MINILGNSGRVSEMREVMDQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRF 60
           +I  LG  G+   M EV+  MR++      + V+  A+K Y   G +++ +++F+ +  +
Sbjct: 46  VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105

Query: 61  NCTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSEL 120
           +C     ++N ++ +L++      A +++        +     S  + M+S C+  +   
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHA 165

Query: 121 ALHVFQEMDYQSCYPNRLSYLIVMKG---------------------------------- 180
           AL +   M  Q C  N ++Y  V+ G                                  
Sbjct: 166 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 225

Query: 181 -LCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILRK 240
            LC+ G + E   LL     ++ ++G   ++  Y   +  LC  GE++ AV ++G ++ +
Sbjct: 226 VLCKKGDVKECEKLLD----KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 285

Query: 241 GLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTD 300
           G K     +  +    C+N+K   +E +  + + + +G  P S +Y  +           
Sbjct: 286 GPKPDVITYNNLIYGLCKNSK--FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 345

Query: 301 QGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIVGSCVPTIALYNIVL 360
             +++V   +  GF P    Y + +  LC EG+ + A+ +  E +     P + LYN ++
Sbjct: 346 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 405

Query: 361 KGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEACKVLEEMVIKSF 420
           KGL + G    A +   +M++K GL+   +T++ LV+GLC+    ++A  +++ M+ K +
Sbjct: 406 KGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 465

Query: 421 WPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSLC 435
           +P   TFN LI G  +  K   A+  L+ M+  G  P V  +NSL++ LC
Sbjct: 466 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

The following BLAST results are available for this feature:

BLAST of Cmc11g0311971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902498.1	1.7e-259	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cuc...	[more]
XP_008459832.1	1.7e-259	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cuc...	[more]
XP_004140638.1	7.2e-250	96.64	pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativu...	[more]
XP_011656819.1	7.2e-250	96.64	pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis sativu...	[more]
XP_038874865.1	7.5e-239	92.17	pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida]	[more]

BLAST of Cmc11g0311971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYK1	9.4e-144	56.78	Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX...	[more]
O49436	1.3e-44	25.57	Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	1.1e-40	24.62	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9CA58	1.8e-38	23.19	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
Q9FIX3	5.3e-38	24.22	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc11g0311971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2N8	8.3e-260	100.00	pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo...	[more]
A0A5D3DM62	8.3e-260	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CB38	8.3e-260	100.00	pentatricopeptide repeat-containing protein At1g05600 isoform X2 OS=Cucumis melo...	[more]
A0A0A0K9Q4	3.5e-250	96.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1	[more]
A0A6J1KU44	3.3e-224	86.83	pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=366...	[more]

BLAST of Cmc11g0311971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05600.1	6.7e-145	56.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05600.2	6.7e-145	56.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G20090.1	9.3e-46	25.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	8.1e-42	24.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74580.1	1.3e-39	23.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 227..332 e-value: 2.9E-11 score: 45.0 coord: 1..85 e-value: 3.6E-11 score: 44.7 coord: 333..438 e-value: 3.6E-23 score: 83.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 94..226 e-value: 1.2E-18 score: 69.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 176..207 e-value: 0.0021 score: 16.1 coord: 138..162 e-value: 0.0021 score: 16.1 coord: 1..28 e-value: 4.8E-4 score: 18.1 coord: 355..380 e-value: 3.9E-7 score: 27.8 coord: 390..421 e-value: 2.3E-4 score: 19.1 coord: 319..352 e-value: 5.0E-4 score: 18.1 coord: 104..135 e-value: 4.8E-5 score: 21.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 104..148 e-value: 4.2E-10 score: 39.7 coord: 355..400 e-value: 5.2E-11 score: 42.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 320..345 e-value: 0.013 score: 15.8 coord: 1..26 e-value: 0.08 score: 13.2 coord: 176..206 e-value: 0.0027 score: 17.8 coord: 291..307 e-value: 0.88 score: 10.0 coord: 36..61 e-value: 0.96 score: 9.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 100..134 score: 9.525427
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 10.446177
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 352..386 score: 11.564229
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 387..421 score: 10.281757
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 1..446
None	No IPR available	PANTHER	PTHR47932:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..446

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0311971.1	Cmc11g0311971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding