Cmc11g0309661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0309661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein, chloroplastic
Location	CMiso1.1chr11: 30312925 .. 30317101 (-)
RNA-Seq Expression	Cmc11g0309661
Synteny	Cmc11g0309661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCTTTGATTTTGGGAGAAAAATCCGATTGTCCATATTAAAAATCTCACTCGCTCATCCACTTCATCTCTCGAAGCTCTACCATCAGCCTTGCAGCGAAACTATGGCTTCTTTCTCCTTCTCCTCCTCGCTCCTTCCTTCTTCAGTCTCTTTCGATCATGTCTCCACTTTCCTTTTCCCCATCTTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACCCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCTCCCACTAGAAAGTCCCCTGTTCCATCTACTTCTTCCTCACCTGCTAAGAAGAGGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACACCCACCCGCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAACTAGACCGGAAGAATAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCTGACCATATCTCGAACAAACGGTGGCTTGAAGCTCTTGAGGTCGGTTTCCTTTTCCTTAATTTCATTTTTCGTTTTGGGTTGTTTTATGTTTGTTCTGGACTCCCAACTTTTTGTTACTTGTTCTTGGTTTATGTTTAATAATTTAATTTATTTGAGATAAAATTGATCTTGGGTTTGTATACTTTTGTAATGTGCTCTGGAATTAACATTTTTTCCATTTATGGATAAAGAGAAAAAATGCATATTTGGGGATTTCAGGGAGATTCATTACATTCTCTTCAAAGTTGAATTTGAAACATGAACATTCATCTTTATGTGCGTTAATTTGAAGGAATGAATTGATGATTTCAAGAGTGTATGAATTTTTTGTGCTGTTGTTTTTACCTATAACAATCGTGGCTGTTTTATTCAACCTTCAGGTGTTTGAAATGCTCCGGGAACAACCATTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGGTCTGGCCAACCACACCGCGCACGTCTGCTTTTTGATACAATGCTTCAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCATATTGTCGGAACAATCTCATTGATGATGCATTTTCCACTCTCAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTCTACACTTATAGTATCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGAAATAGTCGAATCATTGTATGAGGAAATGGCCCAACGACTGATAACTCCAAATACAGTGACCCAGAACATAGTATTAAGTGGATATGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTTTAATAGGAATGCTAGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTAAGTGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAGATGGTATGAGAAGTTTCGTAACTTTGGTATTGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAGAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAATTGCAGTTTCCTTGGACGACATCAACATACAACAACGTGATTGAAGCTTTCGCCGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCTAATGCAGGTCTCTTCCATAAGGTAATTAGTTCAGTTAAGTTGGCAGGAAAACTCGAGATTCCAGAGAATACATCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGAGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACATATAATATTATGATGGAAGCATATGGAAAAGAAGGCATGAATGATAGAGTTCATTACTTGGAACTGGAAAAGAAAGAGGTGATTGATTATGCTTCTAACAATGAGTGATTGTATGCAACGAACTCGAATGCCTAATTGGTGCATGTTTGGGAGCTTGGACGCTACACTGTGCCCGTTCCACTGAGGGTCTATCCTCTATCCCCCAGTCTGTTAAATCGCTACAATGGATACATCTCAGGAGATCAAATCCACCCTTCGTATCACATCCTCTGTGCCGAGTTTTTCCCCGTAGTGTTTTGATGGTCCTTCAGGCAAATATTATTTTCAGTGGGAAGTTTGTGGCTAACTGGATTTTATGTATAGAGCTTTTTGTGACAATGATGCTGATCAGTATTAGTGTCTCCCAATTCTAGTTATATTAGTTTTAGGTGAACTTGCTTTTTGTTCTGGACAAATTGGCATGGAGTGAGAAAGCATAGGAGACTCGCAAGTTTGCACTCGGTGGCCACCTGTCATTCTACGGCCATGCAAGCTATTTGCTTACAAGGGCACAATATTCTAGCGAGCAATGATTGACATTGGCTCCTAGTGGCTTTCGCCCCCAAAAATTTAAACAATATCACAGTTGTTCAAGACATCTTGAGATGATGAAATGTTAATTTGTTTCCGATTGTAAACAAATCATATCAATTTCAATGGTATTTTGTATGTATACAATTGTTTCATAAAATTCTATTGGCTTCCATGATAAATCTGTCTACCTAGAGTCAAGATCATGACCGGTACTTTGTTTACACGTAAAGTACAAAGGCTGAGAATAATATGATGGTAGTTATGGTTTTGCAACAGAGCACAGGAGGGTGTTCAAGAGAATGCATTGGCCACTCCAATGACGTTGACCTCTGCCTCAACAATGAAAGCGTCCTTCACCAGAAAACCCGTGTTAGGTTGTATGAAATTGTTTAAGAGCATGAATCTTGGCCCTCCAACTTCTGGGTTTGACGCACTAAACCAATATGAAACTGCCAATAACAAAACAATCAAAATCCTTGCCATTGTGTTAAAATTGAATAGTTTGTATGTGATCATGTGAGTCATTGTGATTATGTATTTTTACCTTTTCCAGAATGATGCTTTGAGTACAACTGATCTTGCAGGCGCAACGTTACCTCTGCATATATTTTGGTTGCGGGATGCAGTGCAGCGGAATCTGCCAGTGCCAGAAATAGGGAAAGATGGCTGCCTTCTCCACTGCCACGGCCCTTTGGATACACTCGAATTTTCCTGCAACATCACAATGAATACGTGTGCTTACCCATCATCAGATTAATCCAGCTTCAAACCCGGTCAGTTAATTATCAGAATGTGTGAAAAGTAGATGGATACCATTTTTTATCCCCTGCATTGAAGATTTTGGACTCATAGCTCTCAGCATCTAACTTGGAGAAGTTATCAATTTTCCAAACATGCTTGTAAGTGACGGGACTCTTTATCATTGATAAACACTCCCCCTTGCCTCCTTTGAAAGTTTCTTTGCAGACAAAGACCTCAGCTCCAAACACACACACATCATCCACCAGATACCCGTTGGAGGACTCGTTGAATTCTTTTAGGCTAATGTATTTATCGAAACCCCATTCTTTCTTCATTCCTCGAAACCGCCTCGGCTTCCATTTGCCATCTTCATTTTACAGATATTATTATATTGCATACAGGGCAACGGCTTATTTCTTGAAGGGAAGGGAAGATATACCTTCAACTGTGAGGTAGTTATCCTTGTTCTGATCGAGCAAAAAGAGTCGGTAAACAACGAACACTTCCCAACTCGGTTGGAGGGAATCGGTCCCCGCAATTGCCAAATAGAGAGAGATGTGGTCATTCCCACTCTTGCTTTTGTCACCAAGTGGATGGAGTACCAATTTCCTGCAAGAACATTCCATGATTATATGACTATGTAGTGCAAGCTCAAGCCTCAAAATTTATGAAGAAGATGAAGAGTCTGAAGGAATATCATTTACCATTTGTAGCCACCTGCCTCGAACTCCCCGGATTCAAACCGATCCACCGAGTTTTTTGTTAACAGTGAAAAGGACTCTATCTTGACTGTGTAATGAGCAGGGGGGACATCGGAAACATATCTTGAGATCTCTGCATATTATTTCATATTGGTAAGAAAGCAAAAGAAGACTAAGCCTATGCTATGGTCTTGCATTTCCTTTAGTATCTTATGAACTCTGATAAGTGCATTCGTTTTTAACGTAGAAGTTGTTGAAATTACTGTGTGCAATAGTTCTTCCATTC

mRNA sequence

TCCCCTTTGATTTTGGGAGAAAAATCCGATTGTCCATATTAAAAATCTCACTCGCTCATCCACTTCATCTCTCGAAGCTCTACCATCAGCCTTGCAGCGAAACTATGGCTTCTTTCTCCTTCTCCTCCTCGCTCCTTCCTTCTTCAGTCTCTTTCGATCATGTCTCCACTTTCCTTTTCCCCATCTTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACCCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCTCCCACTAGAAAGTCCCCTGTTCCATCTACTTCTTCCTCACCTGCTAAGAAGAGGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACACCCACCCGCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAACTAGACCGGAAGAATAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCTGACCATATCTCGAACAAACGGTGGCTTGAAGCTCTTGAGGTGTTTGAAATGCTCCGGGAACAACCATTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGGTCTGGCCAACCACACCGCGCACGTCTGCTTTTTGATACAATGCTTCAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCATATTGTCGGAACAATCTCATTGATGATGCATTTTCCACTCTCAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTCTACACTTATAGTATCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGAAATAGTCGAATCATTGTATGAGGAAATGGCCCAACGACTGATAACTCCAAATACAGTGACCCAGAACATAGTATTAAGTGGATATGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTTTAATAGGAATGCTAGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTAAGTGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAGATGGTATGAGAAGTTTCGTAACTTTGGTATTGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAGAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAATTGCAGTTTCCTTGGACGACATCAACATACAACAACGTGATTGAAGCTTTCGCCGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCTAATGCAGGTCTCTTCCATAAGGTAATTAGTTCAGTTAAGTTGGCAGGAAAACTCGAGATTCCAGAGAATACATCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGAGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACATATAATATTATGATGGAAGCATATGGAAAAGAAGGCATGAATGATAGAGTTCATTACTTGGAACTGGAAAAGAAAGAGGTGATTGATTATGCTTCTAACAATGAGTGATTGTATGCAACGAACTCGAATGCCTAATTGGTGCATGTTTGGGAGCTTGGACGCTACACTGTGCCCGTTCCACTGAGGGTCTATCCTCTATCCCCCAGTCTGTTAAATCGCTACAATGGATACATCTCAGGAGATCAAATCCACCCTTCGTATCACATCCTCTGTGCCGAGTTTTTCCCCGTAGTGTTTTGATGGTCCTTCAGGCAAATATTATTTTCAGTGGGAAGTTTGTGGCTAACTGGATTTTATGTATAGAGCTTTTTGTGACAATGATGCTGATCAGTATTAGTGTCTCCCAATTCTAGTTATATTAGTTTTAGGTGAACTTGCTTTTTGTTCTGGACAAATTGGCATGGAGTGAGAAAGCATAGGAGACTCGCAAGTTTGCACTCGGTGGCCACCTGTCATTCTACGGCCATGCAAGCTATTTGCTTACAAGGGCACAATATTCTAGCGAGCAATGATTGACATTGGCTCCTAGTGGCTTTCGCCCCCAAAAATTTAAACAATATCACAGTTGTTCAAGACATCTTGAGATGATGAAATGTTAATTTGTTTCCGATTGTAAACAAATCATATCAATTTCAATGGTATTTTGTATGTATACAATTGTTTCATAAAATTCTATTGGCTTCCATGATAAATCTGTCTACCTAGAGTCAAGATCATGACCGGTACTTTGTTTACACGTAAAGTACAAAGGCTGAGAATAATATGATGGTAGTTATGGTTTTGCAACAGAGCACAGGAGGGTGTTCAAGAGAATGCATTGGCCACTCCAATGACGTTGACCTCTGCCTCAACAATGAAAGCGTCCTTCACCAGAAAACCCGTGTTAGGTTGTATGAAATTGTTTAAGAGCATGAATCTTGGCCCTCCAACTTCTGGGTTTGACGCACTAAACCAATATGAAACTGCCAATAACAAAACAATCAAAATCCTTGCCATTGTGTTAAAATTGAATAGTTTGCGCAACGTTACCTCTGCATATATTTTGGTTGCGGGATGCAGTGCAGCGGAATCTGCCAGTGCCAGAAATAGGGAAAGATGGCTGCCTTCTCCACTGCCACGGCCCTTTGGATACACTCGAATTTTCCTGCAACATCACAATGAATACGTGTGCTTACCCATCATCAGATTAATCCAGCTTCAAACCCGGTCAGTTAATTATCAGAATGTGTGAAAAGTAGATGGATACCATTTTTTATCCCCTGCATTGAAGATTTTGGACTCATAGCTCTCAGCATCTAACTTGGAGAAGTTATCAATTTTCCAAACATGCTTACAAAGACCTCAGCTCCAAACACACACACATCATCCACCAGATACCCGTTGGAGGACTCGTTGAATTCTTTTAGGCTAATGGCAACGGCTTATTTCTTGAAGGGAAGGGAAGATATACCTTCAACTGTGAGGTAGTTATCCTTGTTCTGATCGAGCAAAAAGAGTCGGTAAACAACGAACACTTCCCAACTCGGTTGGAGGGAATCGGTCCCCGCAATTGCCAAATAGAGAGAGATGTGGTCATTCCCACTCTTGCTTTTGTCACCAAGTGGATGGAGTACCAATTTCCTGCAAGAACATTCCATGATTATATGACTATGTAGTGCAAGCTCAAGCCTCAAAATTTATGAAGAAGATGAAGAGTCTGAAGGAATATCATTTACCATTTGTAGCCACCTGCCTCGAACTCCCCGGATTCAAACCGATCCACCGAGTTTTTTGTTAACAGTGAAAAGGACTCTATCTTGACTGTGTAATGAGCAGGGGGGACATCGGAAACATATCTTGAGATCTCTGCATATTATTTCATATTGGTAAGAAAGCAAAAGAAGACTAAGCCTATGCTATGGTCTTGCATTTCCTTTAGTATCTTATGAACTCTGATAAGTGCATTCGTTTTTAACGTAGAAGTTGTTGAAATTACTGTGTGCAATAGTTCTTCCATTC

Coding sequence (CDS)

ATGGCTTCTTTCTCCTTCTCCTCCTCGCTCCTTCCTTCTTCAGTCTCTTTCGATCATGTCTCCACTTTCCTTTTCCCCATCTTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACCCCAATTCTCGCATTGTTCGCTGTGCATTTGCAGCTCCCACTAGAAAGTCCCCTGTTCCATCTACTTCTTCCTCACCTGCTAAGAAGAGGCACTGGAAGCAAGGGGAATTTCCAGGAATTACAGAGACACCCACCCGCAGGAAGACCCCTCTCAAGAATGTCAAAAAGAAACTAGACCGGAAGAATAATGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCTGACCATATCTCGAACAAACGGTGGCTTGAAGCTCTTGAGGTGTTTGAAATGCTCCGGGAACAACCATTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGGTCTGGCCAACCACACCGCGCACGTCTGCTTTTTGATACAATGCTTCAAGAAAGATGTGAACCTACCTCTGAACTTTACACTGCTTTGCTTGCTGCATATTGTCGGAACAATCTCATTGATGATGCATTTTCCACTCTCAATCTCATGAAGACCCTCCCTGGCTGCCAACCTGATGTCTACACTTATAGTATCTTAATCAAGGCTTGTGTCGATGCTTCTCGCTTTGAAATAGTCGAATCATTGTATGAGGAAATGGCCCAACGACTGATAACTCCAAATACAGTGACCCAGAACATAGTATTAAGTGGATATGGCAAGATAGGGAAGTATGACCAAATGGAGAAAGTTTTAATAGGAATGCTAGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTAAGTGTGTTTGGTAATAAGGGACAGATTGAAATGATGGAAAGATGGTATGAGAAGTTTCGTAACTTTGGTATTGAGCCAGAAACACGTACATTTAATATTTTGATTGGTGCTTATGGGAAGAAGAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAATTGCAGTTTCCTTGGACGACATCAACATACAACAACGTGATTGAAGCTTTCGCCGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCTAATGCAGGTCTCTTCCATAAGGTAATTAGTTCAGTTAAGTTGGCAGGAAAACTCGAGATTCCAGAGAATACATCATTTTATAATGCAGTTATATCTGCATGTGCTAAGGCTGAGGATCTGATGGAAATGGATAGAGTATTTAAGAGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACATATAATATTATGATGGAAGCATATGGAAAAGAAGGCATGAATGATAGAGTTCATTACTTGGAACTGGAAAAGAAAGAGGTGATTGATTATGCTTCTAACAATGAGTGA

Protein sequence

MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEVIDYASNNE

Homology

[Close]

BLAST of Cmc11g0309661 vs. NCBI nr
Match: XP_008458291.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis melo])

HSP 1 Score: 987.6 bits (2552), Expect = 3.8e-284
Identity = 497/499 (99.60%), Postives = 497/499 (99.60%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MASFSFSSSLLPSSVSFDHVSTFLFPIFV  SSSSSSSSSHPNSRIVRCAFAAPTRKSPV
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFV--SSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60

Query: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120
           PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI
Sbjct: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120

Query: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180
           SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS
Sbjct: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180

Query: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240
           ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE
Sbjct: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240

Query: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300
           EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK
Sbjct: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300

Query: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360
           GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY
Sbjct: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360

Query: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420
           NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK
Sbjct: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420

Query: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480
           LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR
Sbjct: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480

Query: 481 VHYLELEKKEVIDYASNNE 500
           VHYLELEKKEVIDYASNNE
Sbjct: 481 VHYLELEKKEVIDYASNNE 497

[Close]

BLAST of Cmc11g0309661 vs. NCBI nr
Match: XP_004138596.2 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sativus] >KGN45620.2 hypothetical protein Csa_005310 [Cucumis sativus])

HSP 1 Score: 950.7 bits (2456), Expect = 5.2e-273
Identity = 477/499 (95.59%), Postives = 485/499 (97.19%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MASFSFSSSLLPSSVSFDHVSTFLFPIFV   SSS SSSSHPNSRIVRCAFAAPTRKSPV
Sbjct: 11  MASFSFSSSLLPSSVSFDHVSTFLFPIFV---SSSCSSSSHPNSRIVRCAFAAPTRKSPV 70

Query: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120
           PSTSSSPAKKRHWKQGEFPG TET TRR+ PLK VKKKLDRKNNAKAWANTVTEALSDHI
Sbjct: 71  PSTSSSPAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWANTVTEALSDHI 130

Query: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180
           +NKRWL+ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTM+QERCEPT 
Sbjct: 131 TNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTP 190

Query: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240
           ELYTALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYSILIKACVD SRFEIVESLYE
Sbjct: 191 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYE 250

Query: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300
           EMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK
Sbjct: 251 EMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 310

Query: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360
           G IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY
Sbjct: 311 GHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 370

Query: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420
           NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI SVKLAGK
Sbjct: 371 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGK 430

Query: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480
           LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPD+KTY+IMMEAYGKEGMNDR
Sbjct: 431 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDR 490

Query: 481 VHYLELEKKEVIDYASNNE 500
           VHYLELEKK+VID ASNNE
Sbjct: 491 VHYLELEKKQVIDNASNNE 506

[Close]

BLAST of Cmc11g0309661 vs. NCBI nr
Match: XP_038875824.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa hispida])

HSP 1 Score: 932.9 bits (2410), Expect = 1.1e-267
Identity = 468/500 (93.60%), Postives = 481/500 (96.20%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           M SFSFSSSLLPSSVSFDH +TF FPIFV       SSSSH NS IVRCAFAAPTRKSP 
Sbjct: 1   MVSFSFSSSLLPSSVSFDHGATFFFPIFV-------SSSSHSNSPIVRCAFAAPTRKSPP 60

Query: 61  PS-TSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDH 120
           PS +SSSPAKK+HWKQGEFPGITET T RKTPLKNVKKKLDRKNNAKAWANTVTEALSDH
Sbjct: 61  PSISSSSPAKKKHWKQGEFPGITETSTPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDH 120

Query: 121 ISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPT 180
           I+NKRWL+ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRAR LFDTML+ERCEPT
Sbjct: 121 ITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARSLFDTMLEERCEPT 180

Query: 181 SELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLY 240
           SELYTALLAAYCRNNLID+AFSTLNLMKTLPGCQPDVYTYS LIKACVDASRFEIVESLY
Sbjct: 181 SELYTALLAAYCRNNLIDEAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFEIVESLY 240

Query: 241 EEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 300
           EEMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLES+TCRPDVWTMNIILSVFGN
Sbjct: 241 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESSTCRPDVWTMNIILSVFGN 300

Query: 301 KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 360
           KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST
Sbjct: 301 KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 360

Query: 361 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 420
           YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG
Sbjct: 361 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 420

Query: 421 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMND 480
           K EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTY+IM+EAYGKEGMND
Sbjct: 421 KFEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYGKEGMND 480

Query: 481 RVHYLELEKKEVIDYASNNE 500
           RVHYLELEKK+VIDYASNNE
Sbjct: 481 RVHYLELEKKQVIDYASNNE 493

[Close]

BLAST of Cmc11g0309661 vs. NCBI nr
Match: TYK02984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 906.0 bits (2340), Expect = 1.5e-259
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 53  APTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV 112
           +PTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV
Sbjct: 10  SPTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV 69

Query: 113 TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML 172
           TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML
Sbjct: 70  TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML 129

Query: 173 QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF 232
           QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF
Sbjct: 130 QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF 189

Query: 233 EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI 292
           EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI
Sbjct: 190 EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI 249

Query: 293 ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 352
           ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ
Sbjct: 250 ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 309

Query: 353 FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI 412
           FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI
Sbjct: 310 FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI 369

Query: 413 SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY 472
           SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY
Sbjct: 370 SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY 429

Query: 473 GKEGMNDRVHYLELEKKEVIDYASNNE 500
           GKEGMNDRVHYLELEKKEVIDYASNNE
Sbjct: 430 GKEGMNDRVHYLELEKKEVIDYASNNE 456

[Close]

BLAST of Cmc11g0309661 vs. NCBI nr
Match: XP_022958884.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 877.5 bits (2266), Expect = 5.6e-251
Identity = 439/504 (87.10%), Postives = 466/504 (92.46%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MA+FSFSSSLLPSSVSFDH S+  FPI +S S  S       NSR VRC FAAP RKSP 
Sbjct: 1   MAAFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDS-------NSRAVRCTFAAPARKSPP 60

Query: 61  P-----STSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEA 120
           P     S+SSSP KK+HWKQGEFPG+TET   RKTPLKNVKKKLDRK NAKAWANTVTEA
Sbjct: 61  PPSSSSSSSSSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEA 120

Query: 121 LSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQER 180
           LS+HI+NKRW++ALEVFEMLR+QPFYEPKEGTYMKLLVLLGRSGQP RARLLFDTM++E+
Sbjct: 121 LSEHITNKRWIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEK 180

Query: 181 CEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIV 240
           CEPT+ELYTALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYSILIKACVD+SRFE+V
Sbjct: 181 CEPTTELYTALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELV 240

Query: 241 ESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILS 300
           ESLYEEMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILS
Sbjct: 241 ESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILS 300

Query: 301 VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 360
           VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW
Sbjct: 301 VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 360

Query: 361 TTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSV 420
           TTSTYNNVIEAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SV
Sbjct: 361 TTSTYNNVIEAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSV 420

Query: 421 KLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKE 480
           KLAGK EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTY+IM+EAY KE
Sbjct: 421 KLAGKCEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKE 480

Query: 481 GMNDRVHYLELEKKEVIDYASNNE 500
            MNDRVHYLELE+K+VID+A  NE
Sbjct: 481 AMNDRVHYLELERKQVIDHAPTNE 497

[Close]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 1.6e-197
Identity = 344/475 (72.42%), Postives = 405/475 (85.26%), Query Frame = 0


Query: 29  VSSSSSSSSSSS----------HPNSRIVRCAFAAPTRKSPVPSTSSSPAKKRHWKQGEF 88
           +S S SSS  SS          H +  IVRC  AA ++ SP      S  KKR WK GEF
Sbjct: 4   MSLSFSSSLCSSRIPEGKRRFRHRDVGIVRCVLAA-SKSSP-----GSVTKKRLWKDGEF 63

Query: 89  PGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQ 148
           PGITE   +R+TP+KNVKKKLDR++ A  W NTVTE LSD I+ K+WL+ALEVF+MLREQ
Sbjct: 64  PGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQ 123

Query: 149 PFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDD 208
            FY+PKEGTYMKLLVLLG+SGQP+RA+ LFD ML+E  EPT ELYTALLAAY R+NLIDD
Sbjct: 124 TFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDD 183

Query: 209 AFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVL 268
           AFS L+ MK+ P CQPDV+TYS L+KACVDAS+F++V+SLY+EM +RLITPNTVTQNIVL
Sbjct: 184 AFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL 243

Query: 269 SGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGI 328
           SGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I+MME WYEKFRNFGI
Sbjct: 244 SGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 303

Query: 329 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEY 388
           EPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+IEAFADVGDAKNME 
Sbjct: 304 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 363

Query: 389 TFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACA 448
           TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA K EIPENT+FYNAVISACA
Sbjct: 364 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 423

Query: 449 KAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEVID 494
           KA+DL+EM+RV+ RMK++ C  DS+T+ IM+EAY KEGMND+++YLE E+++++D
Sbjct: 424 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMD 472

[Close]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 4.8e-88
Identity = 171/397 (43.07%), Postives = 237/397 (59.70%), Query Frame = 0


Query: 88  RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFYEPKEGT 147
           R+   K++ +K  +K + K    TV E+L + I+  RW  A++VFE+LREQ +Y+P  G 
Sbjct: 95  RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 154

Query: 148 YMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMK 207
           Y+KL+V+LG+  QP +A  LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK
Sbjct: 155 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 214

Query: 208 TLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKY 267
           +   CQPDV+TYSILIK+ +    F+ V+ L  +M ++ I PNT+T N ++  YGK   +
Sbjct: 215 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 274

Query: 268 DQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNI 327
            +ME  LI ML    C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNI
Sbjct: 275 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 334

Query: 328 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEG 387
           L+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E 
Sbjct: 335 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 394

Query: 388 MRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMD 447
           +     T C L+  Y  A    K+   ++     +I  +  F+N ++ A  + E   EM 
Sbjct: 395 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 454

Query: 448 RVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYL 485
            V + M+ K  +PD  TY  M++AY   GM   V  L
Sbjct: 455 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

[Close]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.1e-87
Identity = 160/411 (38.93%), Postives = 253/411 (61.56%), Query Frame = 0


Query: 87  RRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFYEPKEG 146
           R    +K +++K + +     W   V EAL + I   RW  AL++F +LR+Q +YEP+  
Sbjct: 36  RTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCK 95

Query: 147 TYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFSTLNLM 206
           TY KL  +LG   QP +A LLF+ ML E  +PT ++YT+L++ Y ++ L+D AFSTL  M
Sbjct: 96  TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 155

Query: 207 KTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGK 266
           K++  C+PDV+T+++LI  C    RF++V+S+  EM+   +  +TVT N ++ GYGK G 
Sbjct: 156 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 215

Query: 267 YDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFN 326
           +++ME VL  M+E     PDV T+N I+  +GN   +  ME WY +F+  G++P+  TFN
Sbjct: 216 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 275

Query: 327 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAE 386
           ILI ++GK  MY KM SVM++M K  F  TT TYN VIE F   G  + M+  F +M+ +
Sbjct: 276 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 335

Query: 387 GMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAEDLMEM 446
           G++ ++ T+C L+N Y+ AGL  K+ S ++     ++  +T F+N +I+A  +A DL  M
Sbjct: 336 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 395

Query: 447 DRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEVIDYASN 498
             ++ +M+++ C+PD  T+  M++ Y   G+ D V  LE   K++I    N
Sbjct: 396 KELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELE---KQMISSGEN 443

[Close]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-44
Identity = 105/360 (29.17%), Postives = 177/360 (49.17%), Query Frame = 0


Query: 125 WLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYT 184
           WL+ L+VF  +++Q +Y    G Y KL+ ++GR GQ   A  LF  M    C+P + +Y 
Sbjct: 104 WLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYN 163

Query: 185 ALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 244
           +L+ A+     +   +  A      MK +  CQP + TY+IL++A   A   + V+ L++
Sbjct: 164 SLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFK 223

Query: 245 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 304
           ++ + +++P+  T N VL  YGK G   +ME VL+ M +ST CRPDV T NI++  +G K
Sbjct: 224 DLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRM-KSTQCRPDVITFNILIDSYGRK 283

Query: 305 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 364
              + ME+ ++        P   TFN +I  YG+ R+ +K  SV+E M +L F     T 
Sbjct: 284 QTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQ 343

Query: 365 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 424
             +I  +A           F+++     +    +   ++  Y   GL  +    +  A +
Sbjct: 344 ECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQ 403

Query: 425 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 481
             +  N S Y  +  A  KA D + + ++ KRM  +   P+ K +   +EA+G      R
Sbjct: 404 QCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRKPR 462

[Close]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.6e-43
Identity = 99/354 (27.97%), Postives = 173/354 (48.87%), Query Frame = 0


Query: 124 RWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELY 183
           +WL+ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 184 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLY 243
            AL+ A+     +   ++     L+ MK +  CQP+V TY+IL++A   + + + V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 244 EEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 303
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 304 KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 363
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 364 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 423
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 424 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYG 474
              +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

[Close]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL
Match: A0A1S3C7L9 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497754 PE=4 SV=1)

HSP 1 Score: 987.6 bits (2552), Expect = 1.8e-284
Identity = 497/499 (99.60%), Postives = 497/499 (99.60%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MASFSFSSSLLPSSVSFDHVSTFLFPIFV  SSSSSSSSSHPNSRIVRCAFAAPTRKSPV
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFV--SSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60

Query: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120
           PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI
Sbjct: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120

Query: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180
           SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS
Sbjct: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180

Query: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240
           ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE
Sbjct: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240

Query: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300
           EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK
Sbjct: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300

Query: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360
           GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY
Sbjct: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360

Query: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420
           NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK
Sbjct: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420

Query: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480
           LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR
Sbjct: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480

Query: 481 VHYLELEKKEVIDYASNNE 500
           VHYLELEKKEVIDYASNNE
Sbjct: 481 VHYLELEKKEVIDYASNNE 497

[Close]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL
Match: A0A0A0K7C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 2.5e-273
Identity = 477/499 (95.59%), Postives = 485/499 (97.19%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MASFSFSSSLLPSSVSFDHVSTFLFPIFV   SSS SSSSHPNSRIVRCAFAAPTRKSPV
Sbjct: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFV---SSSCSSSSHPNSRIVRCAFAAPTRKSPV 60

Query: 61  PSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHI 120
           PSTSSSPAKKRHWKQGEFPG TET TRR+ PLK VKKKLDRKNNAKAWANTVTEALSDHI
Sbjct: 61  PSTSSSPAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWANTVTEALSDHI 120

Query: 121 SNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTS 180
           +NKRWL+ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTM+QERCEPT 
Sbjct: 121 TNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTP 180

Query: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYE 240
           ELYTALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYSILIKACVD SRFEIVESLYE
Sbjct: 181 ELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYE 240

Query: 241 EMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300
           EMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK
Sbjct: 241 EMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNK 300

Query: 301 GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360
           G IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY
Sbjct: 301 GHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 360

Query: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK 420
           NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI SVKLAGK
Sbjct: 361 NNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGK 420

Query: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDR 480
           LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPD+KTY+IMMEAYGKEGMNDR
Sbjct: 421 LEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDR 480

Query: 481 VHYLELEKKEVIDYASNNE 500
           VHYLELEKK+VID ASNNE
Sbjct: 481 VHYLELEKKQVIDNASNNE 496

[Close]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL
Match: A0A5D3BUY5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00710 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 7.1e-260
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 53  APTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV 112
           +PTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV
Sbjct: 10  SPTRKSPVPSTSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTV 69

Query: 113 TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML 172
           TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML
Sbjct: 70  TEALSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTML 129

Query: 173 QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF 232
           QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF
Sbjct: 130 QERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRF 189

Query: 233 EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI 292
           EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI
Sbjct: 190 EIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNI 249

Query: 293 ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 352
           ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ
Sbjct: 250 ILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 309

Query: 353 FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI 412
           FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI
Sbjct: 310 FPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI 369

Query: 413 SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY 472
           SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY
Sbjct: 370 SSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAY 429

Query: 473 GKEGMNDRVHYLELEKKEVIDYASNNE 500
           GKEGMNDRVHYLELEKKEVIDYASNNE
Sbjct: 430 GKEGMNDRVHYLELEKKEVIDYASNNE 456

[Close]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL
Match: A0A6J1H6E5 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460035 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 2.7e-251
Identity = 439/504 (87.10%), Postives = 466/504 (92.46%), Query Frame = 0


Query: 1   MASFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPV 60
           MA+FSFSSSLLPSSVSFDH S+  FPI +S S  S       NSR VRC FAAP RKSP 
Sbjct: 1   MAAFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDS-------NSRAVRCTFAAPARKSPP 60

Query: 61  P-----STSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEA 120
           P     S+SSSP KK+HWKQGEFPG+TET   RKTPLKNVKKKLDRK NAKAWANTVTEA
Sbjct: 61  PPSSSSSSSSSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEA 120

Query: 121 LSDHISNKRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQER 180
           LS+HI+NKRW++ALEVFEMLR+QPFYEPKEGTYMKLLVLLGRSGQP RARLLFDTM++E+
Sbjct: 121 LSEHITNKRWIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEK 180

Query: 181 CEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIV 240
           CEPT+ELYTALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYSILIKACVD+SRFE+V
Sbjct: 181 CEPTTELYTALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELV 240

Query: 241 ESLYEEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILS 300
           ESLYEEMA+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILS
Sbjct: 241 ESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILS 300

Query: 301 VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 360
           VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW
Sbjct: 301 VFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 360

Query: 361 TTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSV 420
           TTSTYNNVIEAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SV
Sbjct: 361 TTSTYNNVIEAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSV 420

Query: 421 KLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKE 480
           KLAGK EIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTY+IM+EAY KE
Sbjct: 421 KLAGKCEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKE 480

Query: 481 GMNDRVHYLELEKKEVIDYASNNE 500
            MNDRVHYLELE+K+VID+A  NE
Sbjct: 481 AMNDRVHYLELERKQVIDHAPTNE 497

[Close]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL
Match: A0A6J1L0G6 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499248 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.8e-247
Identity = 439/538 (81.60%), Postives = 467/538 (86.80%), Query Frame = 0


Query: 3   SFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSSSHPNSRIVRCAFAAPTRKSPVPS 62
           SFSFSSSLLPSSVSFDH S+  FPI +SSS  S       NSR+VRC FAAP RKSP PS
Sbjct: 5   SFSFSSSLLPSSVSFDHGSSSFFPILLSSSFDS-------NSRVVRCTFAAPARKSPPPS 64

Query: 63  T-----------------------------------------SSSPAKKRHWKQGEFPGI 122
           +                                         SSSP KK+HWKQGEFPG+
Sbjct: 65  SSSSSSSSSPDKKRHWKQGEFPGIIETSAPRMTPARKSPPPFSSSPVKKKHWKQGEFPGV 124

Query: 123 TETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFY 182
           TET   RKTPLKNVKKKLDRK NAKAWANTVTEALS+HI+NKRW++ALEVFEMLR+QPFY
Sbjct: 125 TETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKRWIQALEVFEMLRKQPFY 184

Query: 183 EPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFS 242
           EPKEGTYMKLLVLLGRSGQP RARLLFDTM++E+CEPT+ELYTALLAAYCRNNLIDDAFS
Sbjct: 185 EPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYTALLAAYCRNNLIDDAFS 244

Query: 243 TLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGY 302
            LNLMKTLP CQPD+YTYSILIKACVD+SRFE+VESLYEEMA+RLITPNTVTQNIVLSGY
Sbjct: 245 ILNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAERLITPNTVTQNIVLSGY 304

Query: 303 GKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPE 362
           GKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPE
Sbjct: 305 GKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPE 364

Query: 363 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFE 422
           TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTF 
Sbjct: 365 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFT 424

Query: 423 QMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAE 482
           QMRAEGM+ADTKTFCCLINGY+NAGLFHKVISSVKLAGK EIPENTSFYNAVISACAKAE
Sbjct: 425 QMRAEGMKADTKTFCCLINGYSNAGLFHKVISSVKLAGKCEIPENTSFYNAVISACAKAE 484

Query: 483 DLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEVIDYASNNE 500
           DLMEMDRVFKRMKDKHCQPDSKTY+IM+EAY KE MNDRVHYL+LE+K+VID+A  NE
Sbjct: 485 DLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYLKLERKQVIDHAPTNE 535

[Close]

BLAST of Cmc11g0309661 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 690.3 bits (1780), Expect = 1.2e-198
Identity = 344/475 (72.42%), Postives = 405/475 (85.26%), Query Frame = 0


Query: 29  VSSSSSSSSSSS----------HPNSRIVRCAFAAPTRKSPVPSTSSSPAKKRHWKQGEF 88
           +S S SSS  SS          H +  IVRC  AA ++ SP      S  KKR WK GEF
Sbjct: 4   MSLSFSSSLCSSRIPEGKRRFRHRDVGIVRCVLAA-SKSSP-----GSVTKKRLWKDGEF 63

Query: 89  PGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQ 148
           PGITE   +R+TP+KNVKKKLDR++ A  W NTVTE LSD I+ K+WL+ALEVF+MLREQ
Sbjct: 64  PGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQ 123

Query: 149 PFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDD 208
            FY+PKEGTYMKLLVLLG+SGQP+RA+ LFD ML+E  EPT ELYTALLAAY R+NLIDD
Sbjct: 124 TFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDD 183

Query: 209 AFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVL 268
           AFS L+ MK+ P CQPDV+TYS L+KACVDAS+F++V+SLY+EM +RLITPNTVTQNIVL
Sbjct: 184 AFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL 243

Query: 269 SGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGI 328
           SGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I+MME WYEKFRNFGI
Sbjct: 244 SGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 303

Query: 329 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEY 388
           EPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+IEAFADVGDAKNME 
Sbjct: 304 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 363

Query: 389 TFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACA 448
           TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA K EIPENT+FYNAVISACA
Sbjct: 364 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 423

Query: 449 KAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEVID 494
           KA+DL+EM+RV+ RMK++ C  DS+T+ IM+EAY KEGMND+++YLE E+++++D
Sbjct: 424 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMD 472

[Close]

BLAST of Cmc11g0309661 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 326.6 bits (836), Expect = 3.4e-89
Identity = 171/397 (43.07%), Postives = 237/397 (59.70%), Query Frame = 0


Query: 88  RKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFYEPKEGT 147
           R+   K++ +K  +K + K    TV E+L + I+  RW  A++VFE+LREQ +Y+P  G 
Sbjct: 95  RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 154

Query: 148 YMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMK 207
           Y+KL+V+LG+  QP +A  LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK
Sbjct: 155 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 214

Query: 208 TLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGKY 267
           +   CQPDV+TYSILIK+ +    F+ V+ L  +M ++ I PNT+T N ++  YGK   +
Sbjct: 215 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 274

Query: 268 DQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNI 327
            +ME  LI ML    C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNI
Sbjct: 275 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 334

Query: 328 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEG 387
           L+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E 
Sbjct: 335 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 394

Query: 388 MRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMD 447
           +     T C L+  Y  A    K+   ++     +I  +  F+N ++ A  + E   EM 
Sbjct: 395 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 454

Query: 448 RVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYL 485
            V + M+ K  +PD  TY  M++AY   GM   V  L
Sbjct: 455 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

[Close]

BLAST of Cmc11g0309661 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 3.8e-88
Identity = 159/405 (39.26%), Postives = 252/405 (62.22%), Query Frame = 0


Query: 87  RRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISNKRWLEALEVFEMLREQPFYEPKEG 146
           R    +K +++K + +     W   V EAL + I   RW  AL++F +LR+Q +YEP+  
Sbjct: 86  RTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCK 145

Query: 147 TYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELYTALLAAYCRNNLIDDAFSTLNLM 206
           TY KL  +LG   QP +A LLF+ ML E  +PT ++YT+L++ Y ++ L+D AFSTL  M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205

Query: 207 KTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEMAQRLITPNTVTQNIVLSGYGKIGK 266
           K++  C+PDV+T+++LI  C    RF++V+S+  EM+   +  +TVT N ++ GYGK G 
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265

Query: 267 YDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFN 326
           +++ME VL  M+E     PDV T+N I+  +GN   +  ME WY +F+  G++P+  TFN
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325

Query: 327 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAE 386
           ILI ++GK  MY KM SVM++M K  F  TT TYN VIE F   G  + M+  F +M+ +
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385

Query: 387 GMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLEIPENTSFYNAVISACAKAEDLMEM 446
           G++ ++ T+C L+N Y+ AGL  K+ S ++     ++  +T F+N +I+A  +A DL  M
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445

Query: 447 DRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVHYLELEKKEV 492
             ++ +M+++ C+PD  T+  M++ Y   G+ D V   ELEK+ +
Sbjct: 446 KELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQ--ELEKQMI 488

[Close]

BLAST of Cmc11g0309661 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-44
Identity = 99/354 (27.97%), Postives = 173/354 (48.87%), Query Frame = 0


Query: 124 RWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELY 183
           +WL+ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 184 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLY 243
            AL+ A+     +   ++     L+ MK +  CQP+V TY+IL++A   + + + V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 244 EEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 303
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 304 KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 363
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 364 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 423
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 424 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYG 474
              +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

[Close]

BLAST of Cmc11g0309661 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-44
Identity = 99/354 (27.97%), Postives = 173/354 (48.87%), Query Frame = 0


Query: 124 RWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSELY 183
           +WL+ LEVF  +++Q +Y P  G Y KL+ ++G+ GQ   A  LF  M    C P + +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 184 TALLAAYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLY 243
            AL+ A+     +   ++     L+ MK +  CQP+V TY+IL++A   + + + V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 244 EEMAQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 303
           +++    ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 304 KGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 363
           K + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 364 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAG 423
           Y  +I  +   G        FE++          T   ++  Y   GL+ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 424 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYG 474
              +  + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

The following BLAST results are available for this feature:

BLAST of Cmc11g0309661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458291.1	3.8e-284	99.60	PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic ...	[more]
XP_004138596.2	5.2e-273	95.59	pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sa...	[more]
XP_038875824.1	1.1e-267	93.60	pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa ...	[more]
TYK02984.1	1.5e-259	99.78	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_022958884.1	5.6e-251	87.10	pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor...	[more]

BLAST of Cmc11g0309661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQU6	1.6e-197	72.42	Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop...	[more]
Q9FKC3	4.8e-88	43.07	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop...	[more]
Q9SCP4	4.1e-87	38.93	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]
A7LN87	1.9e-44	29.17	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]
Q9SV96	3.6e-43	27.97	Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop...	[more]

BLAST of Cmc11g0309661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7L9	1.8e-284	99.60	pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis ...	[more]
A0A0A0K7C8	2.5e-273	95.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1	[more]
A0A5D3BUY5	7.1e-260	99.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1H6E5	2.7e-251	87.10	pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor...	[more]
A0A6J1L0G6	1.8e-247	81.60	pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cuc...	[more]

BLAST of Cmc11g0309661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06430.1	1.2e-198	72.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48730.1	3.4e-89	43.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53170.1	3.8e-88	39.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.1	2.6e-44	27.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.2	2.6e-44	27.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 210..277 e-value: 1.2E-17 score: 66.0 coord: 278..350 e-value: 4.2E-14 score: 54.5 coord: 418..491 e-value: 1.9E-15 score: 58.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 83..209 e-value: 6.5E-21 score: 76.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 351..417 e-value: 9.0E-11 score: 43.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 289..320 e-value: 0.0021 score: 16.1 coord: 182..216 e-value: 1.3E-6 score: 26.1 coord: 359..391 e-value: 4.1E-4 score: 18.3 coord: 217..245 e-value: 1.3E-4 score: 19.9 coord: 147..179 e-value: 0.0022 score: 16.0 coord: 252..286 e-value: 4.9E-4 score: 18.1 coord: 324..352 e-value: 4.2E-5 score: 21.4 coord: 430..462 e-value: 4.7E-8 score: 30.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 285..332 e-value: 7.1E-8 score: 32.5 coord: 426..472 e-value: 7.3E-13 score: 48.5 coord: 180..227 e-value: 1.8E-13 score: 50.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 147..176 e-value: 1.1 score: 9.6 coord: 255..279 e-value: 0.067 score: 13.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 355..403 e-value: 1.8E-4 score: 21.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 356..390 score: 9.536388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..178 score: 9.010246
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 10.731171
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 9.656963
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 250..285 score: 8.834866
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..355 score: 8.549871
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 426..460 score: 11.23539
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..87
None	No IPR available	PANTHER	PTHR47932:SF4	OS03G0309800 PROTEIN	coord: 9..494
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 9..494

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0309661.1	Cmc11g0309661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding