Cmc11g0309601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0309601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr11: 30256488 .. 30258035 (+)
RNA-Seq Expression	Cmc11g0309601
Synteny	Cmc11g0309601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAGCAAGTCTACGTTGCTTCCTACGATACTACACACATACCACGACTCTGTGTTTGGGGGACACTCAGGATTCTTAAGAACCTATAAACGGTTGACCGGAGAAATCTATTGGAAAGGAATGAAGAAAGACATCATGCGGTACTATGAAGAATGTGCAATCTGCCAGCGTAATAAATCATCGGCTCTATCTCCAGCTGGGCTACTGATGCCCTTAGAAATTCCAGACGCAATATGGAGTGATATATCCATGGATTTCATAGAGGGACTGCCAAAATCCAAGGGATGGGATGTGATATTCGTGGTGGTAGATAGGCTGAGTAAGTATGGGCATTTTCTGTTGCTTAAGCATCCGTTTTCGGCCAAGATGGTGGCTGAAACATTTGTAAAGGAGGTGGTCAGACTTCATGGATATCCAAGATCGATAGTGTCCGACAGGGACAAGGTTTTTTTAAGCCATTTCTGGAAGGAACTTTTCCGTTTGGCAGGAACCAAGCTGAACCGGAGTTCTTCCTATCACCCCCAATCAGATAGTCAAACCGAGGTGGTGAATAAGAGTATTGAAACATATCTAAGGTGTTTTTGTGGGGAAAAACCGACAGAGTGGAGCCAATGGTTACATTGGGCAGAATATTGGTATAATACAACCTATCATAGTTCCATTGGAATTACCCCCTTTCAAGCTGTGTATGGACGCCTTCCCCCTCCTTTGATTTACTATGGGGATATGGAGACACCTAACTCAACACTAGACCAGCAGCTGAAAGACAGAGACATAACATTGGGAGCCCTGAAGGAACACTTGAAACTAGCCCAAGAACGGATGAAGAAATACGCCGACAATAAGAGAAGAGAAGTCGAGTTCCAGGAAGGGGATATGGTATTCCTCAAACTGCGGCCTTACAGGCAGACTTCCCTCAGAAAGAAGAGAAATGAAAAACTATCACCTAAGTACTTCGGGCCCTATCGAGTCTTAGAAAGGATCGGAAAAGTAGCCTATAAACTAGAACTTCCCGCAGCTGCTGCTATTCACCCCGTGTTTCATGTATCGCAATTGAAGAAAGCTGTAGGAAGAGGAGAGACTGTACAACCACTGAACCCGTACATGAATGCAAACCATGAATGGATTACACGACCGGAAGAGGTATATAGTTATCGCAAGAATCCAGCAACGAAGGATTGGGAAGCCCTGATCAGTTGGAAGGGATTACCCCCACACGAGGCAACATGGGAAAGCTGCACTGACATGAAATATCAGTTTCCAGATTTTCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCACCAATCTTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAATGAAAGAGAGACAAGTGGCGAGAAGGATCATGGCCATGAGACCAACCCAGAGGTAACACGTGTTAGAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAGCGTGGGACCCACAGTTAG

mRNA sequence

ATGGAGATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAGCAAGTCTACGTTGCTTCCTACGATACTACACACATACCACGACTCTGTGTTTGGGGGACACTCAGGATTCTTAAGAACCTATAAACGGTTGACCGGAGAAATCTATTGGAAAGGAATGAAGAAAGACATCATGCGGTACTATGAAGAATGTGCAATCTGCCAGCGTAATAAATCATCGGCTCTATCTCCAGCTGGGCTACTGATGCCCTTAGAAATTCCAGACGCAATATGGAGTGATATATCCATGGATTTCATAGAGGGACTGCCAAAATCCAAGGGATGGGATGTGATATTCGTGGTGGTAGATAGGCTGAGTAAGTATGGGCATTTTCTGTTGCTTAAGCATCCGTTTTCGGCCAAGATGGTGGCTGAAACATTTGTAAAGGAGGTGGTCAGACTTCATGGATATCCAAGATCGATAGTGTCCGACAGGGACAAGGTTTTTTTAAGCCATTTCTGGAAGGAACTTTTCCGTTTGGCAGGAACCAAGCTGAACCGGAGTTCTTCCTATCACCCCCAATCAGATAGTCAAACCGAGGTGGTGAATAAGAGTATTGAAACATATCTAAGGTGTTTTTGTGGGGAAAAACCGACAGAGTGGAGCCAATGGTTACATTGGGCAGAATATTGGTATAATACAACCTATCATAGTTCCATTGGAATTACCCCCTTTCAAGCTGTGTATGGACGCCTTCCCCCTCCTTTGATTTACTATGGGGATATGGAGACACCTAACTCAACACTAGACCAGCAGCTGAAAGACAGAGACATAACATTGGGAGCCCTGAAGGAACACTTGAAACTAGCCCAAGAACGGATGAAGAAATACGCCGACAATAAGAGAAGAGAAGTCGAGTTCCAGGAAGGGGATATGGTATTCCTCAAACTGCGGCCTTACAGGCAGACTTCCCTCAGAAAGAAGAGAAATGAAAAACTATCACCTAAGTACTTCGGGCCCTATCGAGTCTTAGAAAGGATCGGAAAAGTAGCCTATAAACTAGAACTTCCCGCAGCTGCTGCTATTCACCCCGTGTTTCATGTATCGCAATTGAAGAAAGCTGTAGGAAGAGGAGAGACTGTACAACCACTGAACCCGTACATGAATGCAAACCATGAATGGATTACACGACCGGAAGAGGTATATAGTTATCGCAAGAATCCAGCAACGAAGGATTGGGAAGCCCTGATCAGTTGGAAGGGATTACCCCCACACGAGGCAACATGGGAAAGCTGCACTGACATGAAATATCAGTTTCCAGATTTTCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCACCAATCTTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAATGAAAGAGAGACAAGTGGCGAGAAGGATCATGGCCATGAGACCAACCCAGAGGTAACACGTGTTAGAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAGCGTGGGACCCACAGTTAG

Coding sequence (CDS)

ATGGAGATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAGCAAGTCTACGTTGCTTCCTACGATACTACACACATACCACGACTCTGTGTTTGGGGGACACTCAGGATTCTTAAGAACCTATAAACGGTTGACCGGAGAAATCTATTGGAAAGGAATGAAGAAAGACATCATGCGGTACTATGAAGAATGTGCAATCTGCCAGCGTAATAAATCATCGGCTCTATCTCCAGCTGGGCTACTGATGCCCTTAGAAATTCCAGACGCAATATGGAGTGATATATCCATGGATTTCATAGAGGGACTGCCAAAATCCAAGGGATGGGATGTGATATTCGTGGTGGTAGATAGGCTGAGTAAGTATGGGCATTTTCTGTTGCTTAAGCATCCGTTTTCGGCCAAGATGGTGGCTGAAACATTTGTAAAGGAGGTGGTCAGACTTCATGGATATCCAAGATCGATAGTGTCCGACAGGGACAAGGTTTTTTTAAGCCATTTCTGGAAGGAACTTTTCCGTTTGGCAGGAACCAAGCTGAACCGGAGTTCTTCCTATCACCCCCAATCAGATAGTCAAACCGAGGTGGTGAATAAGAGTATTGAAACATATCTAAGGTGTTTTTGTGGGGAAAAACCGACAGAGTGGAGCCAATGGTTACATTGGGCAGAATATTGGTATAATACAACCTATCATAGTTCCATTGGAATTACCCCCTTTCAAGCTGTGTATGGACGCCTTCCCCCTCCTTTGATTTACTATGGGGATATGGAGACACCTAACTCAACACTAGACCAGCAGCTGAAAGACAGAGACATAACATTGGGAGCCCTGAAGGAACACTTGAAACTAGCCCAAGAACGGATGAAGAAATACGCCGACAATAAGAGAAGAGAAGTCGAGTTCCAGGAAGGGGATATGGTATTCCTCAAACTGCGGCCTTACAGGCAGACTTCCCTCAGAAAGAAGAGAAATGAAAAACTATCACCTAAGTACTTCGGGCCCTATCGAGTCTTAGAAAGGATCGGAAAAGTAGCCTATAAACTAGAACTTCCCGCAGCTGCTGCTATTCACCCCGTGTTTCATGTATCGCAATTGAAGAAAGCTGTAGGAAGAGGAGAGACTGTACAACCACTGAACCCGTACATGAATGCAAACCATGAATGGATTACACGACCGGAAGAGGTATATAGTTATCGCAAGAATCCAGCAACGAAGGATTGGGAAGCCCTGATCAGTTGGAAGGGATTACCCCCACACGAGGCAACATGGGAAAGCTGCACTGACATGAAATATCAGTTTCCAGATTTTCACCTTGAGGACAAGGTGGATTTGGAAGAGGAGAGTGATGCTAGGCCACCAATCTTATTTACATACCATAGGAAAAATAAGAAGAAACATGAAGCCAATGAAAGAGAGACAAGTGGCGAGAAGGATCATGGCCATGAGACCAACCCAGAGGTAACACGTGTTAGAGGGGAGGAAAGCAAGGAGGATGGGGGACCAGAGCGTGGGACCCACAGTTAG

Protein sequence

MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALISWKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERETSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS

Homology

[Close]

BLAST of Cmc11g0309601 vs. NCBI nr
Match: KAA0055700.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1046.2 bits (2704), Expect = 9.3e-302
Identity = 503/515 (97.67%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1074 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1133

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1134 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1193

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1194 FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1253

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1254 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1313

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1314 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1373

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1374 DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1433

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1434 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1493

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 1494 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 1553

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 1554 TSGEKDHSHEANPEVTRVGGEESKEDGGPERGTHS 1588

[Close]

BLAST of Cmc11g0309601 vs. NCBI nr
Match: TYK24981.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1042.7 bits (2695), Expect = 1.0e-300
Identity = 501/515 (97.28%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1157 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1216

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1217 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1276

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1277 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1336

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1337 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1396

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1397 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1456

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1457 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1516

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1517 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1576

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 1577 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 1636

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 1637 TSGEKDHSHEANPEVTRVGGEESKEDGGPERGTHS 1671

[Close]

BLAST of Cmc11g0309601 vs. NCBI nr
Match: TYK08591.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1042.0 bits (2693), Expect = 1.8e-300
Identity = 500/515 (97.09%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1679 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1738

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1739 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1798

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1799 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1858

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1859 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1918

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1919 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1978

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1979 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 2038

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 2039 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 2098

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANER+
Sbjct: 2099 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERK 2158

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 2159 TSGEKDHSHEANPEVTRVEGEESKEDGGPERGTHS 2193

[Close]

BLAST of Cmc11g0309601 vs. NCBI nr
Match: KAA0038753.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1037.7 bits (2682), Expect = 3.3e-299
Identity = 499/515 (96.89%), Postives = 508/515 (98.64%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1600 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1659

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1660 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1719

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1720 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1779

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1780 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1839

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1840 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1899

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1900 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1959

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1960 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 2019

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 2020 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 2079

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGG ERGTH+
Sbjct: 2080 TSGEKDHSHEANPEVTRVGGEESKEDGGLERGTHT 2114

[Close]

BLAST of Cmc11g0309601 vs. NCBI nr
Match: KAA0035107.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1037.7 bits (2682), Expect = 3.3e-299
Identity = 497/515 (96.50%), Postives = 507/515 (98.45%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1419 MEIPHYTLQQGVLKFKGRLVIPHKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1478

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1479 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1538

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1539 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1598

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1599 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1658

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1659 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1718

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYR+LERIGKVAYKLELPA
Sbjct: 1719 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRILERIGKVAYKLELPA 1778

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1779 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1838

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANER+
Sbjct: 1839 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERK 1898

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERG H+
Sbjct: 1899 TSGEKDHNHEANPEVTRVEGEESKEDGGPERGAHN 1933

[Close]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-53
Identity = 128/374 (34.22%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 8    LQQGVL-KFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDI 67
            L+ G+L   K ++++P+ + L  TI+  YH+     H G       +     WKG++K I
Sbjct: 891  LKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

Query: 68   MRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDR 127
              Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ +FVVVDR
Sbjct: 951  QEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDR 1010

Query: 128  LSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTK 187
             SK    +      +A+  A  F + V+   G P+ I++D D +F S  WK+        
Sbjct: 1011 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1070

Query: 188  LNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITP 247
            +  S  Y PQ+D QTE  N+++E  LRC C   P  W   +   +  YN   HS+  +TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 248  FQAVYGRLPPPLIYYGDMETP--NSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKR 307
            F+ V+ R  P L     +E P  +   D+  ++       +KEHL     +MKKY D K 
Sbjct: 1131 FEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKI 1190

Query: 308  REV-EFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAA- 367
            +E+ EFQ GD+V +K     +T    K N KL+P + GP+ VL++ G   Y+L+LP +  
Sbjct: 1191 QEIEEFQPGDLVMVK---RTKTGFLHKSN-KLAPSFAGPFYVLQKSGPNNYELDLPDSIK 1250

Query: 368  -AIHPVFHVSQLKK 376
                  FHVS L+K
Sbjct: 1251 HMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-53
Identity = 128/374 (34.22%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 8    LQQGVL-KFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDI 67
            L+ G+L   K ++++P+ + L  TI+  YH+     H G       +     WKG++K I
Sbjct: 891  LKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

Query: 68   MRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDR 127
              Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ +FVVVDR
Sbjct: 951  QEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDR 1010

Query: 128  LSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTK 187
             SK    +      +A+  A  F + V+   G P+ I++D D +F S  WK+        
Sbjct: 1011 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1070

Query: 188  LNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITP 247
            +  S  Y PQ+D QTE  N+++E  LRC C   P  W   +   +  YN   HS+  +TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 248  FQAVYGRLPPPLIYYGDMETP--NSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKR 307
            F+ V+ R  P L     +E P  +   D+  ++       +KEHL     +MKKY D K 
Sbjct: 1131 FEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKI 1190

Query: 308  REV-EFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAA- 367
            +E+ EFQ GD+V +K     +T    K N KL+P + GP+ VL++ G   Y+L+LP +  
Sbjct: 1191 QEIEEFQPGDLVMVK---RTKTGFLHKSN-KLAPSFAGPFYVLQKSGPNNYELDLPDSIK 1250

Query: 368  -AIHPVFHVSQLKK 376
                  FHVS L+K
Sbjct: 1251 HMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-53
Identity = 128/374 (34.22%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 8    LQQGVL-KFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDI 67
            L+ G+L   K ++++P+ + L  TI+  YH+     H G       +     WKG++K I
Sbjct: 891  LKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

Query: 68   MRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDR 127
              Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ +FVVVDR
Sbjct: 951  QEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDR 1010

Query: 128  LSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTK 187
             SK    +      +A+  A  F + V+   G P+ I++D D +F S  WK+        
Sbjct: 1011 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1070

Query: 188  LNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITP 247
            +  S  Y PQ+D QTE  N+++E  LRC C   P  W   +   +  YN   HS+  +TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 248  FQAVYGRLPPPLIYYGDMETP--NSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKR 307
            F+ V+ R  P L     +E P  +   D+  ++       +KEHL     +MKKY D K 
Sbjct: 1131 FEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKI 1190

Query: 308  REV-EFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAA- 367
            +E+ EFQ GD+V +K     +T    K N KL+P + GP+ VL++ G   Y+L+LP +  
Sbjct: 1191 QEIEEFQPGDLVMVK---RTKTGFLHKSN-KLAPSFAGPFYVLQKSGPNNYELDLPDSIK 1250

Query: 368  -AIHPVFHVSQLKK 376
                  FHVS L+K
Sbjct: 1251 HMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-53
Identity = 128/374 (34.22%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 8    LQQGVL-KFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDI 67
            L+ G+L   K ++++P+ + L  TI+  YH+     H G       +     WKG++K I
Sbjct: 891  LKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

Query: 68   MRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDR 127
              Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ +FVVVDR
Sbjct: 951  QEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDR 1010

Query: 128  LSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTK 187
             SK    +      +A+  A  F + V+   G P+ I++D D +F S  WK+        
Sbjct: 1011 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1070

Query: 188  LNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITP 247
            +  S  Y PQ+D QTE  N+++E  LRC C   P  W   +   +  YN   HS+  +TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 248  FQAVYGRLPPPLIYYGDMETP--NSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKR 307
            F+ V+ R  P L     +E P  +   D+  ++       +KEHL     +MKKY D K 
Sbjct: 1131 FEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKI 1190

Query: 308  REV-EFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAA- 367
            +E+ EFQ GD+V +K     +T    K N KL+P + GP+ VL++ G   Y+L+LP +  
Sbjct: 1191 QEIEEFQPGDLVMVK---RTKTGFLHKSN-KLAPSFAGPFYVLQKSGPNNYELDLPDSIK 1250

Query: 368  -AIHPVFHVSQLKK 376
                  FHVS L+K
Sbjct: 1251 HMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.8e-53
Identity = 128/374 (34.22%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 8    LQQGVL-KFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWKGMKKDI 67
            L+ G+L   K ++++P+ + L  TI+  YH+     H G       +     WKG++K I
Sbjct: 891  LKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQI 950

Query: 68   MRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVVVDR 127
              Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ +FVVVDR
Sbjct: 951  QEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDR 1010

Query: 128  LSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTK 187
             SK    +      +A+  A  F + V+   G P+ I++D D +F S  WK+        
Sbjct: 1011 FSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFV 1070

Query: 188  LNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHSSIGITP 247
            +  S  Y PQ+D QTE  N+++E  LRC C   P  W   +   +  YN   HS+  +TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 248  FQAVYGRLPPPLIYYGDMETP--NSTLDQQLKDRDITLGALKEHLKLAQERMKKYADNKR 307
            F+ V+ R  P L     +E P  +   D+  ++       +KEHL     +MKKY D K 
Sbjct: 1131 FEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKI 1190

Query: 308  REV-EFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPAAA- 367
            +E+ EFQ GD+V +K     +T    K N KL+P + GP+ VL++ G   Y+L+LP +  
Sbjct: 1191 QEIEEFQPGDLVMVK---RTKTGFLHKSN-KLAPSFAGPFYVLQKSGPNNYELDLPDSIK 1250

Query: 368  -AIHPVFHVSQLKK 376
                  FHVS L+K
Sbjct: 1251 HMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL
Match: A0A5A7UKN8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00820 PE=4 SV=1)

HSP 1 Score: 1046.2 bits (2704), Expect = 4.5e-302
Identity = 503/515 (97.67%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1074 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1133

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1134 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1193

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1194 FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1253

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1254 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1313

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1314 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1373

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1374 DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1433

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1434 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1493

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 1494 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 1553

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 1554 TSGEKDHSHEANPEVTRVGGEESKEDGGPERGTHS 1588

[Close]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL
Match: A0A5D3DMY9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00980 PE=4 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 5.0e-301
Identity = 501/515 (97.28%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1157 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1216

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1217 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1276

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1277 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1336

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1337 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1396

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1397 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1456

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1457 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1516

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1517 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1576

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 1577 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 1636

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 1637 TSGEKDHSHEANPEVTRVGGEESKEDGGPERGTHS 1671

[Close]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL
Match: A0A5D3C9P5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00120 PE=4 SV=1)

HSP 1 Score: 1042.0 bits (2693), Expect = 8.5e-301
Identity = 500/515 (97.09%), Postives = 509/515 (98.83%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1679 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1738

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1739 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1798

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1799 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1858

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1859 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1918

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1919 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1978

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1979 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 2038

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 2039 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 2098

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANER+
Sbjct: 2099 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERK 2158

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERGTHS
Sbjct: 2159 TSGEKDHSHEANPEVTRVEGEESKEDGGPERGTHS 2193

[Close]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL
Match: A0A5A7T725 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003050 PE=4 SV=1)

HSP 1 Score: 1037.7 bits (2682), Expect = 1.6e-299
Identity = 499/515 (96.89%), Postives = 508/515 (98.64%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP+KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1600 MEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1659

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1660 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1719

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1720 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1779

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1780 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1839

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1840 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1899

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYRVLERIGKVAYKLELPA
Sbjct: 1900 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYKLELPA 1959

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1960 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 2019

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE
Sbjct: 2020 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 2079

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGG ERGTH+
Sbjct: 2080 TSGEKDHSHEANPEVTRVGGEESKEDGGLERGTHT 2114

[Close]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL
Match: A0A5A7T0J9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001820 PE=4 SV=1)

HSP 1 Score: 1037.7 bits (2682), Expect = 1.6e-299
Identity = 497/515 (96.50%), Postives = 507/515 (98.45%), Query Frame = 0


Query: 1    MEIPHYTLQQGVLKFKGRLVIPSKSTLLPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 60
            MEIPHYTLQQGVLKFKGRLVIP KSTL+PTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK
Sbjct: 1419 MEIPHYTLQQGVLKFKGRLVIPHKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTGEIYWK 1478

Query: 61   GMKKDIMRYYEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 120
            GMKKDIMRY EECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI
Sbjct: 1479 GMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI 1538

Query: 121  FVVVDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 180
            FVVVDRLSKYGHFLLLKHPFSAK+VAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF
Sbjct: 1539 FVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELF 1598

Query: 181  RLAGTKLNRSSSYHPQSDSQTEVVNKSIETYLRCFCGEKPTEWSQWLHWAEYWYNTTYHS 240
            RLAGTKLNRSSSYHPQSD QTEVVNKSIETYLRCFCGEKP EWSQWLHWAEYWYNTTYHS
Sbjct: 1599 RLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYNTTYHS 1658

Query: 241  SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKYA 300
            SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKK+A
Sbjct: 1659 SIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQERMKKHA 1718

Query: 301  DNKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKYFGPYRVLERIGKVAYKLELPA 360
            D+KRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPK+FGPYR+LERIGKVAYKLELPA
Sbjct: 1719 DHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRILERIGKVAYKLELPA 1778

Query: 361  AAAIHPVFHVSQLKKAVGRGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKDWEALIS 420
            AAAIHPVFHVSQLKKAVG+GETVQPLNPYMNANHEWITRPEEVYSYRKNPATK+WEALIS
Sbjct: 1779 AAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEWEALIS 1838

Query: 421  WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERE 480
            WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANER+
Sbjct: 1839 WKGLPPHEATWESCTDMKYQFPDFHLEDKVDLEEESDARPPILFTYHRKNKKKHEANERK 1898

Query: 481  TSGEKDHGHETNPEVTRVRGEESKEDGGPERGTHS 516
            TSGEKDH HE NPEVTRV GEESKEDGGPERG H+
Sbjct: 1899 TSGEKDHNHEANPEVTRVEGEESKEDGGPERGAHN 1933

The following BLAST results are available for this feature:

BLAST of Cmc11g0309601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055700.1	9.3e-302	97.67	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK24981.1	1.0e-300	97.28	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK08591.1	1.8e-300	97.09	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038753.1	3.3e-299	96.89	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035107.1	3.3e-299	96.50	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0309601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.8e-53	34.22	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.8e-53	34.22	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.8e-53	34.22	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.8e-53	34.22	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.8e-53	34.22	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKN8	4.5e-302	97.67	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DMY9	5.0e-301	97.28	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C9P5	8.5e-301	97.09	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T725	1.6e-299	96.89	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7T0J9	1.6e-299	96.50	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc11g0309601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 282..302
None	No IPR available	GENE3D	1.10.340.70		coord: 2..80 e-value: 1.1E-15 score: 59.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 471..515
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..515
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 158..431
None	No IPR available	PANTHER	PTHR46148:SF38	PROTEIN NYNRIN-LIKE	coord: 158..431
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 26..82 e-value: 2.7E-17 score: 62.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 90..299 e-value: 2.4E-51 score: 175.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 92..254 score: 19.255964
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 398..478 score: 9.408101
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 93..254
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 363..441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0309601.1	Cmc11g0309601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding