Cmc11g0309591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0309591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr11: 30254687 .. 30256429 (+)
RNA-Seq Expression	Cmc11g0309591
Synteny	Cmc11g0309591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGCCTGATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGATCAAGGATTCCTAGTGGAATGCCGAACCTTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGGGCGGGGAAAGGTCGACGCGGAACCCATAGCGACACTGCTTAAGCAATTCGGCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATACCGATACGCGCATCATCAGAAGGAGGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGACCGAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAAGACGGGAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCCGTGATAGAAGAATTATTTGACGAACTCAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAGGATATCGAAAAGACCGCGTTCAAAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCGTTTGGCTTAACGAATGCCCCCTCTACATTCCAGGCACTGATGAACCAAGTGTTCAAGCCATATTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCTTAATCTACAGTCAAGGGATGGACGAACATGTTCAGCACTTAGAAGTGGTTTTAGGACTGCTGCAAGACCGGGAGTTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTAAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTATAGGCGTTTCGTTAAGAACTATGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAGCATACAAATGGGATGCAGAAGCCGAGGGCGCCTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTGCCTTTCGAAATTGAATCAGATGCTTCGGGAGTGGGAGTGGGGGCTGTTCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACCTTAAGTATGCGGGACAGAGCACGACCGGTATACGAAAGAGAATTACTTGCTGTAGTGCTTGCAGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAACGGGTTGTGCAGCCTCAATATCAGAAATGGGTTGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTATCCCCAGCAGCACTTGAATCAAATTACAGCTCCCCCGATGATAGACATGGAAATTATTAA

mRNA sequence

ATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGCCTGATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGATCAAGGATTCCTAGTGGAATGCCGAACCTTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGGGCGGGGAAAGGTCGACGCGGAACCCATAGCGACACTGCTTAAGCAATTCGGCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATACCGATACGCGCATCATCAGAAGGAGGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGACCGAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAAGACGGGAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCCGTGATAGAAGAATTATTTGACGAACTCAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAGGATATCGAAAAGACCGCGTTCAAAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCGTTTGGCTTAACGAATGCCCCCTCTACATTCCAGGCACTGATGAACCAAGTGTTCAAGCCATATTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCTTAATCTACAGTCAAGGGATGGACGAACATGTTCAGCACTTAGAAGTGGTTTTAGGACTGCTGCAAGACCGGGAGTTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTAAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTATAGGCGTTTCGTTAAGAACTATGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAGCATACAAATGGGATGCAGAAGCCGAGGGCGCCTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTGCCTTTCGAAATTGAATCAGATGCTTCGGGAGTGGGAGTGGGGGCTGTTCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACCTTAAGTATGCGGGACAGAGCACGACCGGTATACGAAAGAGAATTACTTGCTGTAGTGCTTGCAGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAACGGGTTGTGCAGCCTCAATATCAGAAATGGGTTGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTATCCCCAGCAGCACTTGAATCAAATTACAGCTCCCCCGATGATAGACATGGAAATTATTAA

Coding sequence (CDS)

ATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGCCTGATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGATCAAGGATTCCTAGTGGAATGCCGAACCTTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGGGCGGGGAAAGGTCGACGCGGAACCCATAGCGACACTGCTTAAGCAATTCGGCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATACCGATACGCGCATCATCAGAAGGAGGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGACCGAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAAGACGGGAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCCGTGATAGAAGAATTATTTGACGAACTCAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAGGATATCGAAAAGACCGCGTTCAAAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCGTTTGGCTTAACGAATGCCCCCTCTACATTCCAGGCACTGATGAACCAAGTGTTCAAGCCATATTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCTTAATCTACAGTCAAGGGATGGACGAACATGTTCAGCACTTAGAAGTGGTTTTAGGACTGCTGCAAGACCGGGAGTTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTAAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTATAGGCGTTTCGTTAAGAACTATGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAGCATACAAATGGGATGCAGAAGCCGAGGGCGCCTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTGCCTTTCGAAATTGAATCAGATGCTTCGGGAGTGGGAGTGGGGGCTGTTCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACCTTAAGTATGCGGGACAGAGCACGACCGGTATACGAAAGAGAATTACTTGCTGTAGTGCTTGCAGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAACGGGTTGTGCAGCCTCAATATCAGAAATGGGTTGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTATCCCCAGCAGCACTTGAATCAAATTACAGCTCCCCCGATGATAGACATGGAAATTATTAA

Protein sequence

MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLLKQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVSPAALESNYSSPDDRHGNY

Homology

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BLAST of Cmc11g0309591 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/573 (97.21%), Postives = 567/573 (98.95%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV
Sbjct: 940  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 999

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNL+KTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL
Sbjct: 1000 IRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 1059

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            +QF RVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1060 QQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1119

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1120 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1179

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1180 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1239

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDREL+VNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1240 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLE 1299

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVS+WPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA
Sbjct: 1300 ADPEKIRAVSDWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 1359

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1360 EGAFNKLKKAMMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1419

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELL+VVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1420 ARPVYERELLSVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1479

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSR+SPA   S  ++P
Sbjct: 1480 SFEVVYQPGLENKAADALSRISPAVHLSQITAP 1512

[Close]

BLAST of Cmc11g0309591 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/573 (97.21%), Postives = 567/573 (98.95%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV
Sbjct: 951  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 1010

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNL+KTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL
Sbjct: 1011 IRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 1070

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            +QF RVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1071 QQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1130

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1131 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1190

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1191 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1250

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDREL+VNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1251 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLE 1310

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVS+WPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA
Sbjct: 1311 ADPEKIRAVSDWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 1370

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1371 EGAFNKLKKAMMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1430

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELL+VVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1431 ARPVYERELLSVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1490

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSR+SPA   S  ++P
Sbjct: 1491 SFEVVYQPGLENKAADALSRISPAVHLSQITAP 1523

[Close]

BLAST of Cmc11g0309591 vs. NCBI nr
Match: KAA0038753.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 999  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 1058

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 1059 IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 1118

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1119 KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1178

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1179 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1238

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1239 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1298

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1299 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 1358

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 1359 ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 1418

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1419 EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1478

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1479 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1538

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1539 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1571

[Close]

BLAST of Cmc11g0309591 vs. NCBI nr
Match: TYK08591.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 1078 MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 1137

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 1138 IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 1197

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1198 KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1257

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1258 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1317

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1318 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1377

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1378 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 1437

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 1438 ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 1497

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1498 EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1557

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1558 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1617

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1618 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1650

[Close]

BLAST of Cmc11g0309591 vs. NCBI nr
Match: KAA0033982.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 556  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 615

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 616  IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 675

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 676  KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 735

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 736  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 795

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 796  DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 855

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 856  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 915

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 916  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 975

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 976  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1035

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1036 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1095

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1096 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1128

[Close]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 3.5e-98
Identity = 178/428 (41.59%), Postives = 265/428 (61.92%), Query Frame = 0


Query: 157 YRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGS-----WRFCVDYRALN 216
           Y Y    ++E+E  + +ML+ GIIR S SPY+SP+ +V KK  +     +R  +DYR LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 217 NVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFKTHEGHYEFL 276
            +T+ D+ PIP ++E+  +L   + F+ +DL  G+HQI M PE + KTAF T  GHYE+L
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 277 VMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDR 336
            MPFGL NAP+TFQ  MN + +P L +  LV+ DDI+++S  +DEH+Q L +V   L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 337 ELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYY 396
            L + ++KC F K   ++LGH ++  G++ +PEKI A+ ++P PT  +E++ FLGLTGYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 397 RRFVKNYGAIAAPLTQLLKKGAY--KWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIE 456
           R+F+ N+  IA P+T+ LKK       + E + AF KLK  +   P+L +PDF   F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 457 SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFT 516
           +DAS V +GAVL+Q   P++Y S+TL+  +      E+ELLA+V A + +R YLLGR F 
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 517 VKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVSPAALESN 576
           + +D + L +L   +    +  +W  KL  + F++ Y  G EN  ADALSR+    LE  
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIK---LEET 632

Query: 577 YSSPDDRH 578
           Y S   +H
Sbjct: 633 YLSEQTQH 637

[Close]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 5.9e-98
Identity = 181/444 (40.77%), Postives = 271/444 (61.04%), Query Frame = 0


Query: 142 HIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKD--- 201
           H+   +   P+  + Y  A   + E+E  V EML+ G+IR S SPY+SP  +V KK    
Sbjct: 197 HVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDAS 256

Query: 202 --GSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDI 261
               +R  +DYR LN +TIPD++PIP ++E+  +L     F+ +DL  G+HQI M  E I
Sbjct: 257 GANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESI 316

Query: 262 EKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDE 321
            KTAF T  GHYE+L MPFGL NAP+TFQ  MN + +P L +  LV+ DDI+I+S  + E
Sbjct: 317 SKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTE 376

Query: 322 HVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPT 381
           H+  +++V   L D  L + ++KC F K   ++LGH ++  G++ +P K++A+  +P PT
Sbjct: 377 HLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPT 436

Query: 382 NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDA---EAEGAFNKLKKAMMT 441
             +E+R FLGLTGYYR+F+ NY  IA P+T  LKK   K D    E   AF KLK  ++ 
Sbjct: 437 KDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRT-KIDTQKLEYIEAFEKLKALIIR 496

Query: 442 LPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVV 501
            P+L +PDF   F + +DAS + +GAVL+Q   P+++ S+TL+  +      E+ELLA+V
Sbjct: 497 DPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIV 556

Query: 502 LAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENK 561
            A + +R YLLGR+F + +D + L++L   +    + ++W  +L  Y F++ Y  G EN 
Sbjct: 557 WATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENS 616

Query: 562 AADALSRVSPAALESNYSSPDDRH 578
            ADALSR+    +E N+ S   +H
Sbjct: 617 VADALSRIK---IEENHHSEATQH 636

[Close]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.8e-94
Identity = 181/473 (38.27%), Postives = 282/473 (59.62%), Query Frame = 0


Query: 114 EPIATLLKQFGRVFEWPAT-LPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVD 173
           E + +LL +F R+FE P + +  + +++  I   +  DP+  + Y Y  + + E+ER +D
Sbjct: 86  EILNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNT-QDPIYAKSYPYPVNMRGEVERQID 145

Query: 174 EMLSSGIIRPSKSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPDKFPIPVIEEL 233
           E+L  GIIRPS SPY+SP+ +V KK     +  +R  VD++ LN VTIPD +PIP I   
Sbjct: 146 ELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINAT 205

Query: 234 FDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQAL 293
              L  A  F+ LDL +G+HQI M   DI KTAF T  G YEFL +PFGL NAP+ FQ +
Sbjct: 206 LASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRM 265

Query: 294 MNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRI 353
           ++ + + ++ +   V+ DDI+++S+  D H ++L +VL  L    L VN+EK  F   ++
Sbjct: 266 IDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQV 325

Query: 354 SYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQ 413
            +LG+ ++  G++ADP+K+RA+SE P PT+V+E++ FLG+T YYR+F+++Y  +A PLT 
Sbjct: 326 EFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTN 385

Query: 414 LLK------------KGAYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 473
           L +            K     D  A  +FN LK  + +  +L  P F  PF + +DAS  
Sbjct: 386 LTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNW 445

Query: 474 GVGAVLTQ----CRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGR-KFTV 533
            +GAVL+Q      +P+AY S++L+  +      E+E+LA++ ++   R YL G     V
Sbjct: 446 AIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKV 505

Query: 534 KTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVSP 564
            TD + L F L  R    + ++W A++  Y+ E++Y+PG  N  ADALSR+ P
Sbjct: 506 YTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIPP 557

[Close]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 324.7 bits (831), Expect = 2.1e-87
Identity = 178/440 (40.45%), Postives = 253/440 (57.50%), Query Frame = 0


Query: 133  LPPQRS------IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSP 192
            LPP+ +      ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP
Sbjct: 572  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 193  YSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGY 252
             SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GY
Sbjct: 632  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 253  HQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDD 312
            HQI M P+D  KTAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DD
Sbjct: 692  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 313  ILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKI 372
            ILI+S+  +EH +HL+ VL  L++  L V  +KC FA     +LG+ I  Q +     K 
Sbjct: 752  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 373  RAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNK 432
             A+ ++PTP  V++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A +K
Sbjct: 812  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIDK 871

Query: 433  LKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDR 492
            LK A+   PVL   +    + + +DAS  G+GAVL +          V YFSK+L    +
Sbjct: 872  LKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 931

Query: 493  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 552
              P  E ELL ++ A+  +R  L G+ FT++TD  SL  L  +     + Q+W+  L  Y
Sbjct: 932  NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATY 991

Query: 553  SFEVVYQPGLENKAADALSR 561
             F + Y  G +N  ADA+SR
Sbjct: 992  DFTLEYLAGPKNVVADAISR 1008

[Close]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 2.8e-87
Identity = 178/440 (40.45%), Postives = 252/440 (57.27%), Query Frame = 0


Query: 133  LPPQRS------IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSP 192
            LPP+ +      ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP
Sbjct: 598  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 193  YSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGY 252
             SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GY
Sbjct: 658  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 253  HQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDD 312
            HQI M P+D  KTAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DD
Sbjct: 718  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 313  ILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKI 372
            ILI+S+  +EH +HL+ VL  L++  L V  +KC FA     +LG+ I  Q +     K 
Sbjct: 778  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 373  RAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNK 432
             A+ ++PTP  V++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A  K
Sbjct: 838  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEK 897

Query: 433  LKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDR 492
            LK A+   PVL   +    + + +DAS  G+GAVL +          V YFSK+L    +
Sbjct: 898  LKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 957

Query: 493  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 552
              P  E ELL ++ A+  +R  L G+ FT++TD  SL  L  +     + Q+W+  L  Y
Sbjct: 958  NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATY 1017

Query: 553  SFEVVYQPGLENKAADALSR 561
             F + Y  G +N  ADA+SR
Sbjct: 1018 DFTLEYLAGPKNVVADAISR 1034

[Close]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/573 (97.21%), Postives = 567/573 (98.95%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV
Sbjct: 951  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 1010

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNL+KTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL
Sbjct: 1011 IRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 1070

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            +QF RVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1071 QQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1130

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1131 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1190

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1191 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1250

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDREL+VNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1251 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLE 1310

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVS+WPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA
Sbjct: 1311 ADPEKIRAVSDWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 1370

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1371 EGAFNKLKKAMMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1430

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELL+VVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1431 ARPVYERELLSVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1490

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSR+SPA   S  ++P
Sbjct: 1491 SFEVVYQPGLENKAADALSRISPAVHLSQITAP 1523

[Close]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/573 (97.21%), Postives = 567/573 (98.95%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV
Sbjct: 940  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 999

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNL+KTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL
Sbjct: 1000 IRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 1059

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            +QF RVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1060 QQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1119

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1120 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1179

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1180 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1239

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDREL+VNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1240 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLE 1299

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVS+WPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA
Sbjct: 1300 ADPEKIRAVSDWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 1359

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1360 EGAFNKLKKAMMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1419

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELL+VVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1420 ARPVYERELLSVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1479

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSR+SPA   S  ++P
Sbjct: 1480 SFEVVYQPGLENKAADALSRISPAVHLSQITAP 1512

[Close]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL
Match: A0A5A7SS61 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00430 PE=4 SV=1)

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 556  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 615

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 616  IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 675

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 676  KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 735

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 736  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 795

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 796  DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 855

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 856  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 915

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 916  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 975

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 976  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1035

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1036 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1095

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1096 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1128

[Close]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL
Match: A0A5D3DMY9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00980 PE=4 SV=1)

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 556  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 615

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 616  IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 675

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 676  KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 735

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 736  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 795

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 796  DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 855

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 856  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 915

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 916  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 975

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 976  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1035

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1036 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1095

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1096 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1128

[Close]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL
Match: A0A5A7T725 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003050 PE=4 SV=1)

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 558/573 (97.38%), Postives = 564/573 (98.43%), Query Frame = 0


Query: 1    MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVV 60
            MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQG+KVV
Sbjct: 999  MCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVV 1058

Query: 61   IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLL 120
            IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKV+AEPIATLL
Sbjct: 1059 IRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVEAEPIATLL 1118

Query: 121  KQFGRVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 180
            KQF RVFEWPATLPPQR+IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII
Sbjct: 1119 KQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGII 1178

Query: 181  RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 240
            RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL
Sbjct: 1179 RPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKL 1238

Query: 241  DLKAGYHQIRMCPEDIEKTAFKTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 300
            DLKAGYHQIRMCPEDIEKTAF+THEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV
Sbjct: 1239 DLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFV 1298

Query: 301  LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 360
            LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE
Sbjct: 1299 LVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLE 1358

Query: 361  ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEA 420
            ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYG IAAPLTQLLKKG YKWDAEA
Sbjct: 1359 ADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGTIAAPLTQLLKKGTYKWDAEA 1418

Query: 421  EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 480
            EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR
Sbjct: 1419 EGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDR 1478

Query: 481  ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 540
            ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY
Sbjct: 1479 ARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGY 1538

Query: 541  SFEVVYQPGLENKAADALSRVSPAALESNYSSP 574
            SFEVVYQPGLENKAADALSRV PA   S  ++P
Sbjct: 1539 SFEVVYQPGLENKAADALSRVPPAVHLSQITAP 1571

[Close]

BLAST of Cmc11g0309591 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-36
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 318 VQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLG--HFISEQGLEADPEKIRAVSEWPTP 377
           + HL +VL + +  + + N +KC+F +P+I+YLG  H IS +G+ ADP K+ A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 378 TNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKAMMTLP 437
            N  E+RGFLGLTGYYRRFVKNYG I  PLT+LLKK + KW   A  AF  LK A+ TLP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 438 VLTMPDFNLPF 447
           VL +PD  LPF
Sbjct: 121 VLALPDLKLPF 131

[Close]

BLAST of Cmc11g0309591 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 7.1e-06
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 163 QKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSW 202
           ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

[Close]

BLAST of Cmc11g0309591 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.8e-04
Identity = 23/80 (28.75%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 2   CRSVEVQLDGWKVTDSFLPLQLG--GVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKV 61
           C  + + +   ++T++FL L L    VD+ILG +WL  LG T V+W+    +F H  + +
Sbjct: 182 CLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWI 241

Query: 62  VI---RGDPSLIKTRVSLKN 77
            +     +   + T+V +K+
Sbjct: 242 TLCAEHEELEQVTTKVKMKS 261

The following BLAST results are available for this feature:

BLAST of Cmc11g0309591 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00786.1	0.0e+00	97.21	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060543.1	0.0e+00	97.21	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038753.1	0.0e+00	97.38	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK08591.1	0.0e+00	97.38	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033982.1	0.0e+00	97.38	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0309591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	3.5e-98	41.59	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.9e-98	40.77	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	1.8e-94	38.27	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	2.1e-87	40.45	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.8e-87	40.45	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0309591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX59	0.0e+00	97.21	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRA0	0.0e+00	97.21	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7SS61	0.0e+00	97.38	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DMY9	0.0e+00	97.38	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T725	0.0e+00	97.38	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc11g0309591 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.0e-36	54.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	7.1e-06	56.41	DNA/RNA polymerases superfamily protein	[more]
AT3G29750.1	1.8e-04	28.75	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 139..279 e-value: 9.9E-93 score: 311.3
None	No IPR available	PFAM	PF08284	RVP_2	coord: 1..40 e-value: 2.1E-4 score: 21.1
None	No IPR available	GENE3D	3.10.20.370		coord: 445..512 e-value: 2.5E-11 score: 45.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 392..514 coord: 2..305
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 392..514 coord: 2..305
None	No IPR available	CDD	cd01647	RT_LTR	coord: 178..354 e-value: 9.40606E-98 score: 293.347
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 447..560 e-value: 2.17471E-47 score: 159.58
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 194..352 e-value: 2.8E-31 score: 108.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 175..354 score: 16.173262
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..62 e-value: 1.3E-6 score: 30.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 219..354 e-value: 9.9E-93 score: 311.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 363..444 e-value: 2.5E-29 score: 103.1
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 416..510 e-value: 1.3E-31 score: 108.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 120..546

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0309591.1	Cmc11g0309591.1	mRNA