Cmc11g0309521 (gene) Melon (Charmono) v1.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACTTCCCATTTATCTGCTAGTCCCGACTCTCATTCGCAAAACAACTGCGAGCACAGAAGAATTGAATTGTGAATTGTTAATCAGGAAAATGATACTTACTCCTGGAAACATGATTGGAACCTACTCTTGGAGACATGATTCACAATCCAAAGCTTGTTTTTCATAAGGTATTTCTATTTTCTTTTGCACTTTACTCTTCTTACTATTATGACGTTCAATTCTTATCGTTATAGTGTGCATATTTGATTGTCGAGTCTTTTACCCCCTAGCATGACTTCAACCATTATGTGATATTGTGTCTGAGAGCTCCAAAATTTATGGTTTTACCTCCACCCGTTCAATTTCTCCTCATAATTCTATTTATTGTATACTATTCTAGGCAGACGAGATGGCTGAGATGTTCAGGCAAAGAATAGCTCAAGCAGAAGCAATGGCTCATGCAGGCGACCTTCCTGGATTTCAGTCGGAGGTACTTATTAGTTATTTGTTTGTCTTGGATTTTTCAGCTCCAAAAAAGAGGATTGAAACTTTTTGAGCATGATTAGTTTAGTTCCATCTCAATGTTTGAGTGGTTGAGTGGTTAATGCGATTGACTCAGCTTTGACAAAACTTCCCATTTATCTGCTAGTCCCGACTCTCATTCGCAAAACAACTGCGAGCACAGAAGAATTGAATTGTGAATTGTTAATCAGGAAAATGATACTTACTCCTGGAAACATGATTGGAACCTACTCTTGGAGACATGATTCACAATCCAAAGCTTGTTTTTCATAAGGCAGACGAGATGGCTGAGATGTTCAGGCAAAGAATAGCTCAAGCAGAAGCAATGGCTCATGCAGGCGACCTTCCTGGATTTCAGTCGGAGCTTTGA ATGATTCACAATCCAAAGCTTGTTTTTCATAAGGCAGACGAGATGGCTGAGATGTTCAGGCAAAGAATAGCTCAAGCAGAAGCAATGGCTCATGCAGGCGACCTTCCTGGATTTCAGTCGGAGCTTTGA MIHNPKLVFHKADEMAEMFRQRIAQAEAMAHAGDLPGFQSEL Homology
BLAST of Cmc11g0309521 vs. NCBI nr
Match: XP_022958818.1 (30S ribosomal protein S1, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 60.1 bits (144), Expect = 5.4e-06 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. NCBI nr
Match: XP_023006590.1 (30S ribosomal protein S1, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 60.1 bits (144), Expect = 5.4e-06 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. NCBI nr
Match: XP_038906593.1 (30S ribosomal protein S1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Cmc11g0309521 vs. NCBI nr
Match: PKU78561.1 (30S ribosomal protein S1, chloroplastic [Dendrobium catenatum]) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05 Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Cmc11g0309521 vs. NCBI nr
Match: RWR76397.1 (Ribosomal protein S1 [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.1e-06 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.1e-06 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy TrEMBL
Match: A0A6J1L0J3 (30S ribosomal protein S1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499271 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy TrEMBL
Match: A0A6J1H453 (30S ribosomal protein S1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459974 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy TrEMBL
Match: A0A2I0WSE5 (30S ribosomal protein S1, chloroplastic OS=Dendrobium catenatum OX=906689 GN=RPS1 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.6e-06 Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy TrEMBL
Match: A0A3S3PZD1 (Ribosomal protein S1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00483800 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cmc11g0309521 vs. ExPASy TrEMBL
Match: A0A7N0TJR8 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-05 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Cmc11g0309521 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 ) HSP 1 Score: 52.8 bits (125), Expect = 8.0e-08 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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