Cmc11g0309311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0309311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 30074117 .. 30075122 (-)
RNA-Seq Expression	Cmc11g0309311
Synteny	Cmc11g0309311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATCTTTATTGCTTTTTCTCCCCCCTGCATATATATTATCTCTTTGCAGTGTACAAAACAGTGGTCAGAATTTTCCCTTTATATATATGCTTCATTTTTCCCTAATTCATACCATATTATATCCTTCCAATTCTCAAACAAATCACAAGGTAACTCTTTTAATATCAAATTCTTTCCTGATTTTTTGCCTTTTATTTATCGAAATCAAGCTCTGTTTTTGGTCTTCTGCGTTTAGGGTTTTGTAGTGATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGTCCAACGTTGTTGAAAAAAAGGGTGCACGTAAGCTAGCTCAAGGCAGCGGTGACCGAAGAATCCCCAAAGCAGGAGTGTTCAATGATGCAAATGAGCCTGAACTTAAGAAGACTGATGTTGCTCCTGACGATGTTGTAGCTAACAACATCGATAATGATGACAATGAAGACGACGATGTAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGACACCGAAACTCACCGATACTTCTCGAGTGATAAGCCGTATAGGCCCTAGAAAATCTTTCTAAGATCATCACCATCACCATTGTCGTCTTCGTCTTCGTCCAGGGTGACTAGTCAATTGTAAAAGAAATGAAGTGTTTTTCTTTATTGCAATAAAGTATGAAATGTGCATGGGATGCCTGCTTAAGAGCTAAGCCCTAAAGTTGAAAGTAGAGATGGTTGGCTTTATTAAGCATGCAAGCTTTTGGCATTTCATAGAGTTTGATGATTGTTGTGTGTTGTGAAAAATAGAATATATTTTGAATAATGTGGATGAAATCAAGATTTAATGTGTATCATAATTATATGCTATGGTGTGTTATGATTTTGGGTCTTGTAACTATTTTGTGAAAGGGAAAATGATTAATATATACAAAATTGGTGATGATCTTAATCTTGTTATTAGTAATAAAAAAGAAACTTGTGAGTTCTTG

mRNA sequence

GCAATCTTTATTGCTTTTTCTCCCCCCTGCATATATATTATCTCTTTGCAGTGTACAAAACAGTGGTCAGAATTTTCCCTTTATATATATGCTTCATTTTTCCCTAATTCATACCATATTATATCCTTCCAATTCTCAAACAAATCACAAGGGTTTTGTAGTGATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGTCCAACGTTGTTGAAAAAAAGGGTGCACGTAAGCTAGCTCAAGGCAGCGGTGACCGAAGAATCCCCAAAGCAGGAGTGTTCAATGATGCAAATGAGCCTGAACTTAAGAAGACTGATGTTGCTCCTGACGATGTTGTAGCTAACAACATCGATAATGATGACAATGAAGACGACGATGTAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGACACCGAAACTCACCGATACTTCTCGAGTGATAAGCCGTATAGGCCCTAGAAAATCTTTCTAAGATCATCACCATCACCATTGTCGTCTTCGTCTTCGTCCAGGGTGACTAGTCAATTGTAAAAGAAATGAAGTGTTTTTCTTTATTGCAATAAAGTATGAAATGTGCATGGGATGCCTGCTTAAGAGCTAAGCCCTAAAGTTGAAAGTAGAGATGGTTGGCTTTATTAAGCATGCAAGCTTTTGGCATTTCATAGAGTTTGATGATTGTTGTGTGTTGTGAAAAATAGAATATATTTTGAATAATGTGGATGAAATCAAGATTTAATGTGTATCATAATTATATGCTATGGTGTGTTATGATTTTGGGTCTTGTAACTATTTTGTGAAAGGGAAAATGATTAATATATACAAAATTGGTGATGATCTTAATCTTGTTATTAGTAATAAAAAAGAAACTTGTGAGTTCTTG

Coding sequence (CDS)

ATGCTTCATTTTTCCCTAATTCATACCATATTATATCCTTCCAATTCTCAAACAAATCACAAGGGTTTTGTAGTGATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGTCCAACGTTGTTGAAAAAAAGGGTGCACGTAAGCTAGCTCAAGGCAGCGGTGACCGAAGAATCCCCAAAGCAGGAGTGTTCAATGATGCAAATGAGCCTGAACTTAAGAAGACTGATGTTGCTCCTGACGATGTTGTAGCTAACAACATCGATAATGATGACAATGAAGACGACGATGTAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGACACCGAAACTCACCGATACTTCTCGAGTGATAAGCCGTATAGGCCCTAG

Protein sequence

MLHFSLIHTILYPSNSQTNHKGFVVMIMMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELKKTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP

Homology

[Close]

BLAST of Cmc11g0309311 vs. NCBI nr
Match: TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-48
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 28  MMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELKKT 87
           MMKRVLLLFA LLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKA VFNDANEPELKKT
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVFNDANEPELKKT 60

Query: 88  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
           DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

[Close]

BLAST of Cmc11g0309311 vs. NCBI nr
Match: XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 26  MIMMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELK 85
           MIMMKRVLLLFAALLLLLMADA    +VEKKGARKLAQG  +RR PKAGVFNDANE +L+
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFNDANESDLE 60

Query: 86  KTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
            TDVAPDDVVANN  NDDNEDDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  NTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

[Close]

BLAST of Cmc11g0309311 vs. NCBI nr
Match: KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-21
Identity = 72/137 (52.55%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 1   MLHFSLIHTILYPSNSQTNHKGFVVMIMMKRVLLLFAALLLLLMADAAMSNVVEKKGARK 60
           M  F L+H I   +   T+H       MMK+VL+L    LLL+M DAAM  VVEKK ARK
Sbjct: 1   MFPFVLLHPISLNTKQITSH-------MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARK 60

Query: 61  LAQGSGDRRIPKAGVFNDANEPELKKTDVAPDDVVANNIDNDDN-EDDDVNLGYKNYGKG 120
           LA+  G +  P+  VF+   E   +  +V     V  NIDN++N +DDD NLGYKNYGKG
Sbjct: 61  LARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKG 120

Query: 121 SDTETHRYFSSDKPYRP 137
           SDTETHRYFSSDKPY P
Sbjct: 121 SDTETHRYFSSDKPYEP 130

[Close]

BLAST of Cmc11g0309311 vs. NCBI nr
Match: KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.6 bits (270), Expect = 4.3e-20
Identity = 65/110 (59.09%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 28  MMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELKKT 87
           MMK+VL+L    LLL+M DAAM  VVEKK ARKLA+  G +  P+  VF+   E   +  
Sbjct: 1   MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDV 60

Query: 88  DVAPDDVVANNIDNDDN-EDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
           +V     V  NIDN++N +DDD NLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 61  EVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 110

[Close]

BLAST of Cmc11g0309311 vs. NCBI nr
Match: KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-20
Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 26  MIMMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELK 85
           M MMKR LLLFA  LLL+  DA M +V++KK ARKLAQ S   +IPK GVF      E  
Sbjct: 1   MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ-SFSGQIPKTGVFGGVKYSE-- 60

Query: 86  KTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
             DVA  DV  NN    + ++DD NLGYKNYGKGSDTETHRYFSS+KPYRP
Sbjct: 61  DADVAQADVGMNN----NEDEDDENLGYKNYGKGSDTETHRYFSSEKPYRP 104

[Close]

BLAST of Cmc11g0309311 vs. ExPASy TrEMBL
Match: A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 28  MMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELKKT 87
           MMKRVLLLFA LLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKA VFNDANEPELKKT
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVFNDANEPELKKT 60

Query: 88  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
           DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

[Close]

BLAST of Cmc11g0309311 vs. ExPASy TrEMBL
Match: A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.9e-40
Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 26  MIMMKRVLLLFAALLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAGVFNDANEPELK 85
           MIMMKRVLLLFAALLLLLMADA    +VEKKGARKLAQG  +RR PKAGVFNDANE +L+
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFNDANESDLE 60

Query: 86  KTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 137
            TDVAPDDVVANN  NDDNEDDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  NTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

The following BLAST results are available for this feature:

BLAST of Cmc11g0309311 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02960.1	2.8e-48	98.17	uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]	[more]
XP_004150985.1	1.8e-39	85.59	uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical ...	[more]
KAG7013689.1	1.3e-21	52.55	hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575119.1	4.3e-20	59.09	hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6594018.1	7.3e-20	61.26	hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc11g0309311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0309311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BV16	1.4e-48	98.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KGD6	8.9e-40	85.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1	[more]

BLAST of Cmc11g0309311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0309311.1	Cmc11g0309311.1	mRNA