Cmc11g0308801 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308801
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 29697636 .. 29698300 (+)
RNA-Seq Expression	Cmc11g0308801
Synteny	Cmc11g0308801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAAACAAATTCCTTTTGTTTCTTAATCTTCGAAAGTTATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGAAGACGAAAGATAAACAGGCCGGGGCGGTGGTGACTTCCGATCAGTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCTTATGCAAAACGGAAATAGCTTTCGTTTTTCTCTACATAACTAGTGGATGGATGCTCATAATATATAAAGAAATATAGATACTTAACTACAAGCCTGCAGTATAGAAATAAATAGAGATATGGGATATATATATATATATATATAGATATAGATAGATAGATATGAAGTATGTGTATGGGGTACTTAGCTATAGCTTGGTTATGTTGTTTTTCTTGGGCTCTTTAGTAATATAAAAAAGTATGCATGTTTTGAGTTAAGTTGAGTGAGTTGCATGTCACACCTCTTCATCTTAATTCAATTTCACCTAAAAGCTGAGTGAGTTATTTCACTTTGACTAAAATTTTACCAACAACAATAT

mRNA sequence

TCAAAAACAAATTCCTTTTGTTTCTTAATCTTCGAAAGTTATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGAAGACGAAAGATAAACAGGCCGGGGCGGTGGTGACTTCCGATCAGTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCTTATGCAAAACGGAAATAGCTTTCGTTTTTCTCTACATAACTAGTGGATGGATGCTCATAATATATAAAGAAATATAGATACTTAACTACAAGCCTGCAGTATAGAAATAAATAGAGATATGGGATATATATATATATATATATAGATATAGATAGATAGATATGAAGTATGTGTATGGGGTACTTAGCTATAGCTTGGTTATGTTGTTTTTCTTGGGCTCTTTAGTAATATAAAAAAGTATGCATGTTTTGAGTTAAGTTGAGTGAGTTGCATGTCACACCTCTTCATCTTAATTCAATTTCACCTAAAAGCTGAGTGAGTTATTTCACTTTGACTAAAATTTTACCAACAACAATAT

Coding sequence (CDS)

ATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGAAGACGAAAGATAAACAGGCCGGGGCGGTGGTGACTTCCGATCAGTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCTTATGCAAAACGGAAATAG

Protein sequence

MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASKGRRVAATERPAQHQPPRKVDQPPLKTKDKQAGAVVTSDQLAKTRGGIVITTWRSYAKRK

Homology

[Close]

BLAST of Cmc11g0308801 vs. NCBI nr
Match: KGN47421.1 (hypothetical protein Csa_021737 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-30
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1  MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRR-VAATE-RPAQHQPPRKV-D 60
          MGRREREI DTDANLA IGIEGFKLIDKFFGRAS   GRR VAATE RPAQ QPPRKV +
Sbjct: 1  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAE 60

Query: 61 QPPLKTKDKQAGAVVTSDQLAKTRGGIVITTWRSYAKRK 95
          QPP KTK+KQ GAVVTSD LAKTRGGIVITTWRSYAKRK
Sbjct: 61 QPPSKTKEKQ-GAVVTSDHLAKTRGGIVITTWRSYAKRK 98

[Close]

BLAST of Cmc11g0308801 vs. NCBI nr
Match: KGN47422.1 (hypothetical protein Csa_021740 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 3.0e-17
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 4  REREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA-TERPAQHQPPRKVDQPPLK 63
          REREIR +  +LA IG EGF++ID++FGRAS    RRVAA T RPA  QPPRK +QPP  
Sbjct: 5  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRI 64

Query: 64 TKDKQAGAVVTSDQLAKTRGGIVITTWRSYAK 93
           K+K   A VTSDQ+AK  GG VITTWR YAK
Sbjct: 65 RKEKPV-AAVTSDQVAKHGGGTVITTWRPYAK 95

[Close]

BLAST of Cmc11g0308801 vs. NCBI nr
Match: KAG6575081.1 (hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 3.6e-10
Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 14 NLAMIGIEGFKLIDKFFGRASKGRRVA--ATERPAQHQPPRKVDQPPLKTKDKQAGAVVT 73
          +LA IG EGF LID++FGRA   RR A  A  RPA  Q P K +QPP K ++K   A V 
Sbjct: 6  DLAKIGREGFDLIDEYFGRAPATRRAAAVAAARPALPQAPCKAEQPPRKKREKMPVA-VN 65

Query: 74 SDQLAKTRGGIVITTWRS 90
           +Q+AK RGGIVITTWR+
Sbjct: 66 CNQVAKARGGIVITTWRA 82

[Close]

BLAST of Cmc11g0308801 vs. NCBI nr
Match: KAG6575082.1 (hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.9 bits (172), Expect = 6.8e-09
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 13 ANLAMIGIEGFKLIDKFFGRASKGRRVAATERPAQHQPPRKVDQPPLKTKDKQAGAVVTS 72
          A+LA IG EGF+LID++FGR    RR  A  RPA  Q P K +QPP K ++K     V  
Sbjct: 5  ADLAKIGREGFELIDEYFGRVPATRR-PAVARPALPQAPCKAEQPPRKMREK-LPVPVNC 64

Query: 73 DQLAKTRGGIVITTWRS 90
          +Q+A+ RGG+VITTWR+
Sbjct: 65 NQVARARGGVVITTWRA 79

[Close]

BLAST of Cmc11g0308801 vs. ExPASy TrEMBL
Match: A0A0A0KI19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.8e-31
Identity = 85/99 (85.86%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1  MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRR-VAATE-RPAQHQPPRKV-D 60
          MGRREREI DTDANLA IGIEGFKLIDKFFGRAS   GRR VAATE RPAQ QPPRKV +
Sbjct: 1  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAE 60

Query: 61 QPPLKTKDKQAGAVVTSDQLAKTRGGIVITTWRSYAKRK 95
          QPP KTK+KQ GAVVTSD LAKTRGGIVITTWRSYAKRK
Sbjct: 61 QPPSKTKEKQ-GAVVTSDHLAKTRGGIVITTWRSYAKRK 98

[Close]

BLAST of Cmc11g0308801 vs. ExPASy TrEMBL
Match: A0A0A0KG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 4  REREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA-TERPAQHQPPRKVDQPPLK 63
          REREIR +  +LA IG EGF++ID++FGRAS    RRVAA T RPA  QPPRK +QPP  
Sbjct: 5  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRI 64

Query: 64 TKDKQAGAVVTSDQLAKTRGGIVITTWRSYAK 93
           K+K   A VTSDQ+AK  GG VITTWR YAK
Sbjct: 65 RKEKPV-AAVTSDQVAKHGGGTVITTWRPYAK 95

The following BLAST results are available for this feature:

BLAST of Cmc11g0308801 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47421.1	1.4e-30	85.86	hypothetical protein Csa_021737 [Cucumis sativus]	[more]
KGN47422.1	3.0e-17	63.04	hypothetical protein Csa_021740 [Cucumis sativus]	[more]
KAG6575081.1	3.6e-10	56.41	hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6575082.1	6.8e-09	51.95	hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc11g0308801 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0308801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI19	6.8e-31	85.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1	[more]
A0A0A0KG95	1.5e-17	63.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1	[more]

BLAST of Cmc11g0308801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0308801.1	Cmc11g0308801.1	mRNA