Cmc11g0308731 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308731
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gamma-glutamyl hydrolase 2
Location	CMiso1.1chr11: 29653946 .. 29660218 (+)
RNA-Seq Expression	Cmc11g0308731
Synteny	Cmc11g0308731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGTCTCGCCAACTTTGATCGACTTCAAAATCAGAACCGAAAATCACTTCCGTTCATTTTTCCTTTTCCTTTTCTTGTTTTGGAAGCCAAAATCACTTCGAAAAAGATTCTTCAATTCCCCATTAATGGCGAACGATAATCATAGCTTGCCATGAAAACGATTTGGTATTAGTGGACGTCTATCATGTGTTTTCTGAAAATTTCTCGCCCAGCTTTGATGAACAATGGCGAAATGGTTTTTAGACAAAATTGAATTCATGATTGCTGTTGCCAATGGAGTTAAATTACTACTGTAATCGAATTCGAGAAAGTTGGGGAAAAATCGTGTTGTTGGTGCTGCAATATAGGTACTCTAGAACTAGGCTTGCTTTATTATCCTTAGCATGCCGGATCATGTCCGCCATGGAAGCTACACAAACGAACTATGTGACCTTTATATCCTTGCAATGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCAAGGGAGTCTAATTCTTCGTGAATGGGAGTTGAAAAGCGAACAGCATTATAGTTTGCGATCGAGGAACATCCACTGTGAGATGAGATGACTGGTAAATTTCATTTTATTCTATATAGACACTAAACTAAATTTCTAATCGGTTTTGTCATTCTTCGTTGTCTGTAATTTTCTTTACTAATTAGGAAATTTCACTTTTCAAACACGATGCAATTCACTCAATTTCTTGTGTTTGTTCTTTTCCTTGCTCCTATTGAGCCTGTTGTTTCGAATTAGAAAAGCAAATTTGTTCTTATCGTTATAGAGATTCCGTATCATTCATTCCCCTGCATGACGGTCGTTTTCAGGTCGTTTCATTACTGTATCATCTTCGTCGAGGAAATGGAATTTGATTGGTTATGTAGAATCTTGCATTGGTGGTCCATGTTGTAAAGTAAGCGCGCCACTACTGTTGCACGCTAGGTGTTTGATGTAATGTCTCTGCATAATTTGGTTACCCCCTGCATAGTTTTTTTCTTTCTTTTTTTCCTACTTTTTCTAATACGAAAAGTCTTAGCTAATCATTTCTAGGTATAAGATTGAATTATATCTAGACTGGTCGGACGGTAATCTGTATCGATCATATGTTCAGATTTCATACATTGTCTGAATTGCAATACTCTTGTAGAGCCAATATTGTAATTTGTATCTAGTCTGTATCATCAAATGTATCGGTTCTATATGATACAATTGCTTAGATCCTTGTTTGTTTTCTAGGTCACGTTTTTTTAAAATTTGGTTTTTTGTATTTTGTTTTTGAAAATTAAAACTACAAATATCCTTCCACTCCTAAATTTCTTGATTTGTGATCTATTTTTTACCCATGTGTTCAATAATCAAGTGAAATTTGAAATTCAAAATGGTAGTTCTTAAAAACTTGTTTTTTGTTTTTGGAATTTACCTAAGAATTCAAAGATGCAAACTATAATATGAAAATGAGAGGAAATAGGATAATTTTTAAAAAGTAAAAATGAAAAATGTAATCGCTATCGATTGTCAAAATTTATACTTGTTCCCTACTAATTTTCATAATTTAATTTTTCTTTCTAAAAATTAGTAGAAGGTAGCTAACTAAATTATAAACTTTTAGGGTTGCAGTATTTATCAGCTTAATTTTCAAGAAACAACAAACAAAACCAAAATATTATGGAATTGAGTCTTAAAAATTCAAGCACTAAGAGTCAAAATCAGATCTAACTTTTACTTTTTGTTACATAACATCTTTATCTTAACCACCGCCCATTTGCACCCCACGGGGAGGTAAGCTGATTAGCAAAACTTTTTGAATTCTGTTTGTATCCTAATTGATAAGAGAAATCAGCGTTTTAGTCCTTTAATGATGAAAAGTAACTGTTAGTCAAGCTTGCTTTCTGTTGGCTGAAATGTTGGACTAAAACTCCGTTGGCTAAGGTTCATTCCCTGGAAATTAGTTGAAGGGTCAGCAATCAGAGGACAAAAAAGGGAAGTGATCTTGCACGACATTTCATTAAATTAAGTCTAAAGAGTCTGCAGAAGCATAAAGCCACGCTGTTCTCTAATTGTTTAACATTATTTTGCTGCCTTTCTTGCACACAGGGAAGGAGTCTGGATTCAACTTTTGATTACTTCTTCCCGTTTGAGTTTGAAACAAGAAGAACGCCGTACCCCAAGAAATGGATGACAGGTAAGACAATCAGATTTATACAGCTTGTTTGCCTCCCAAACATGCACAAAGGCCTTAAATTTAGCTAAGCCTTTTATTTTTCATTTAATGGAGTACCCAACCCCAAGACAGGAGCATTTATCAAAGGTTTTGTATGATTTAGGTGCTGCTTGGGAATAATGATACGGGAAACTGTTTTAGACTTTTCAAAACAATATTTTACTGTTTTCTACAGTAAACCAGGTTGGATTCTAAATTTTCCCTACTCATTTCCAGTTGAGTTGATCTAAAAGATTTTTAACTCGAGAAGTTCCTTGAACATAGAAATGAAGATTAAAGAACATGTATACAACAACATAATTTAAAATTTTGAATGATTGTTATATAGTCAATAAAGTCAAGGTAAAAAGTAAAGGAGTTCAAGAGAAAAAGAAGTCTAAACCATGGTGGCCACCTACCAAGATTTAAATATCCGTTTAATATTTTTAGTAGTCAAGTCTAGTTGAGGTATGCGTTACTTGTTAGTTGGTACGGTCACTCAAACATAAAAAGATTGTAATATAGAAAAATATCCCAATGATATTATTTAAATATTAACTTAGGCATCCCTTGTCGAAGCTTTGGGTAAACTTAAGAAGGAAAAGCTCTTGATGTCTCAAGAGTTTGGGCCATGGGACAGGAGAGCCACAAACTTTTTAAAAGAAGAATTATATTAGAAATTGGAGAGCTGTAAATCCACTTCTGTTTGGTTCAATTTTGGACCACTTTTGGTTATTAGATATCTTGGTTCAGCGTTTCTTTGTACCGAAAAGAAAGAAGAATCAAGCTAGTGTGATGTGGTATATACCAGATTCTAAGTTATATCACATGTCTAAGTTATCAGTTATTATCATAAGTTGATAAGAATACTTCTTTACGTCATCATGTGTAAAAAAGGTATTCTCAGAACAAGGGAAAAGAAAACCCCCATAAATTTGGCTGCTGCGCTTCCATAACTGAAGATCTAGCCTTGGAAATGACTATATTGTCCAACATTGTATATAGTATAGTTGAAGAATATGATAATCGTATTGTTAAAGGATTGTTTATGAGCCATGCATTTGCATGTACGAAATAGACTGTTGCGTAGCTCACGTTTCATTTGTTGTCTTAATGGTTATACACACCTCACCACACATGGTTGGTCTAATATTACTGTGCTTCCATATGCCTCTTCCAATTTTTTCGTTATATAATTTCCGGTCATTCGAAAGGGAAATTCCATCCATTGATATGATACCATAAGTTCTACACCAAAAAGAAAAAAAAAAAACAAAAAGAAAACAAAAATCACTATCTAAATATATTACAAACATATCCCAATTCCAATTATCCTAATAAATCAAACAAAATAATAGGCTTTGAAAAAAAATGGAGATAATTATAATATATAGTATACCTTCCTATTAAATCCTAGTTATACTTGATATCATACAAAAATATTAAATCTAAGTTTATGTATCTTGTTTTTGAACAGGTGATTCTTTCAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGATTGCATGTGCAAAGTTGTTATTGGTGTTTTTGCCTACCAAGTCTTCGGCTTTGATTGACTCCATTTCCCAATCTGTATTGAAGACCACTATTAAGATTGAGACCACACATGCCATCTGAGCTGCCAGAAGCCCGTAGCAAAGACCCAGAAACCCAAACATCCAAACAAACGCCGACAAGACTGCCACCGGCGCCCCCACCATGTAAAATGAACAGAAGTTTATCCCTGCTCCGATCACCGGCCTTGCACTTCCTCTCAGAATCCCGCAGCTCGTTGTTTGTGGACAATTTGCTAGCTCGCACAGCCCGATTATGGGCAGAACCGCCATTGTCAGCTCTAGAATTTCCTCGTCTTTTGTGAAAACTCTTCCCCATGTCCTTCTTCCAACAGTGGTCAATGCGAGCCCCATCAATGAGCCCACCAAGGCCAATCCAATTGCCACCACAGCCGCCAGTCGCGCCTTTTTAGGCCGGCCAGCACCGAGCTCGTGGCCGACTCTGGTCGAGACGGCAGCACTGAGAGCCATTGGTAATGTGTACATTAGCGAAGTTGTTTGGATTACGATGCCTGAAGTCGCAAGTGCAATACGTGGGTTATAGAGGTAGCCAGTGAGAATGGTCATGAACTCATACCACCACCATTCCAAGCAAACACCAAGGCAGCTAGGAATAGCCAACTTGATCAGCATTCCCCATTCTTCCCCGACCGTGACAGTGCTAACGACTGTGCTGCTTTTCAGTGGCACAAACAGATTAGCCTCCTTGGAAGAGGAGGAAAAGATACTACTACGAGTAGTGAATATCAAATAGAGTAAAAGGAAGAAAAGGGTATTGAAGTTAGCTAAAAAATTGGAGATAGCAATCCCACTGATTCCAAGATCAAGAGGAAAAGTCAAGAAAATGGTAATAGGAACATGTAGGATAATAGCCAACAAATTGCACCACATAACAAGCCACGTAGTGCCTTTGTTTCTAAGGTAAATACGCAAAGGGTGTAGAAGGCTATTCAGTATCAAATCAGGGACTGCAAAACGGCAATAAACAGCTGCAATTCTAGTGATTTCTTGGTTCTGATTTAAAACCAACATGAGAGGCTCCAAATTTAGCCAAAGAAATCCAATGGGAATAGTTGCGAAAAGCAAAATAAGAACCGTTCTTTGCAAAGTGAGAAACGCAATGGAAGAATTATGAGAACCAAAAGCCTGACTACAGAGTGGCTCCATGCCCATAGCCAAGCCCGAGAGAACTGAATAGCCAGTGATATTAGTGAAGCCAATAGCCAAAGAACCAGCTGCGAGATGGAGAGTTCCAAGTCTACCCATGCAAATAACAGAGATCATATTTTTGAGATATCCCACCAAACCCATTGCCAAAACAGGGAAGCCAATGTCAGCCATTTGCTTCAGCTCGTCAAGGACCTTCAAAAAAGGAGAGGAAACTCCATCAAGTTAGCAAAAAAAACAGGTACGCCATTAATAATAAATATATAGTGTTATTATTCTCTCTGCAAGGTTTTTTTTTCGTACCTCTGGCATTGTCGGGTACTTTTGGGACTTCTCTTCTGCAAGCATATTTTTTCCTTCCTTTACCCCTTGCTGTTTCTTTTTCCCCTGTGGCTTAGGAAAGAGAGAAAAAAAAGAAAAGAGAGAGAGAGAAGGGAGAAAGCAAAGTGAGTGTTAGGCATGCAAGGAAAAGATTTTAATTTATAGAGATGGGAATTGGACCAATTGGTGGGGGTCTCTTTTATATGCGTTTATGTGACATATTCTCTCTCCTTTAAAATGCATAAAGCCCCTCCTTTAGTTTTGCTTGCCTCCCCACCCCCATTAAAAGTTTTTCATTTCATGATTTTCATATACCAGGAGAATATTACTCAAACGTTTCCTTTTATTCTCTCTCTTTTTCATATGAATCAAACTTGATTTTTTTCGTGGAGTAAACAATTGATCTATCTATATTTATTTTTCTGATTATACGATATTGTCTATTTCTATCATGCTAGTGATATGAGAATTTGAAACCAAATACTAGCTTAACTTTTGGGACTTCTATTGTGATAAAAAAATTCACAACAAAAACTGTGAGAAAAATGATGATTTCCTATTGCAATTTTTATTTTTCACAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAACTAACCAAGAGAAAAATGGGGAAAACACAATAGAAAATTTTTATTGCAATATGGATGGACATTGCATGAGAGCTACAATAGACATGATCATCTCTAGTGTGGTAGTACGTTTTTGTGTTGGTAGAAGGTTAAATTTTAATGCATTTTTGAAGGCATGTCATTAATCATAAAGGTGTCTTTGAATGAGTCAGCCATACATAAATAAATAAATAAATAAAAAGACTTTGTACGTTAACCCATAAATGTAGGTATTATATACATGCTGCCATGGAAGAAAAGAAAAAAGAGAAGAGAAATCCATAAAATCAAACTAGTAATAACTAAAATTGCCAACAAAATATTCCATAGGCTCTCTTTTTATGGACAAAGTTTGCACTAAGTTTAATGTGGG

mRNA sequence

GCTGTCTCGCCAACTTTGATCGACTTCAAAATCAGAACCGAAAATCACTTCCGTTCATTTTTCCTTTTCCTTTTCTTGTTTTGGAAGCCAAAATCACTTCGAAAAAGATTCTTCAATTCCCCATTAATGGCGAACGATAATCATAGCTTGCCATGAAAACGATTTGGTATTAGTGGACGTCTATCATGTGTTTTCTGAAAATTTCTCGCCCAGCTTTGATGAACAATGGCGAAATGGTTTTTAGACAAAATTGAATTCATGATTGCTGTTGCCAATGGAGTTAAATTACTACTGTAATCGAATTCGAGAAAGTTGGGGAAAAATCGTGTTGTTGGTGCTGCAATATAGGTACTCTAGAACTAGGCTTGCTTTATTATCCTTAGCATGCCGGATCATGTCCGCCATGGAAGCTACACAAACGAACTATGTGACCTTTATATCCTTGCAATGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCAAGGGAGTCTAATTCTTCGTGAATGGGAGTTGAAAAGCGAACAGCATTATAGTTTGCGATCGAGGAACATCCACTGTGAGATGAGATGACTGGGAAGGAGTCTGGATTCAACTTTTGATTACTTCTTCCCGTTTGAGTTTGAAACAAGAAGAACGCCGTACCCCAAGAAATGGATGACAGGTGATTCTTTCAGAAATTCAGGACCTTCCTCACGTATGGCTGTGTGGATTGCATGTGCAAAGTTGTTATTGGTGTTTTTGCCTACCAAGTCTTCGGCTTTGATTGACTCCATTTCCCAATCTGTATTGAAGACCACTATTAAGATTGAGACCACACATGCCATCTGAGCTGCCAGAAGCCCGTAGCAAAGACCCAGAAACCCAAACATCCAAACAAACGCCGACAAGACTGCCACCGGCGCCCCCACCATGTAAAATGAACAGAAGTTTATCCCTGCTCCGATCACCGGCCTTGCACTTCCTCTCAGAATCCCGCAGCTCGTTGTTTGTGGACAATTTGCTAGCTCGCACAGCCCGATTATGGGCAGAACCGCCATTGTCAGCTCTAGAATTTCCTCGTCTTTTGTGAAAACTCTTCCCCATGTCCTTCTTCCAACAGTGGTCAATGCGAGCCCCATCAATGAGCCCACCAAGGCCAATCCAATTGCCACCACAGCCGCCAGTCGCGCCTTTTTAGGCCGGCCAGCACCGAGCTCGTGGCCGACTCTGGTCGAGACGGCAGCACTGAGAGCCATTGGTAATGTGTACATTAGCGAAGTTGTTTGGATTACGATGCCTGAAGTCGCAAGTGCAATACGTGGGTTATAGAGGTAGCCAGTGAGAATGGTCATGAACTCATACCACCACCATTCCAAGCAAACACCAAGGCAGCTAGGAATAGCCAACTTGATCAGCATTCCCCATTCTTCCCCGACCGTGACAGTGCTAACGACTGTGCTGCTTTTCAGTGGCACAAACAGATTAGCCTCCTTGGAAGAGGAGGAAAAGATACTACTACGAGTAGTGAATATCAAATAGAGTAAAAGGAAGAAAAGGGTATTGAAGTTAGCTAAAAAATTGGAGATAGCAATCCCACTGATTCCAAGATCAAGAGGAAAAGTCAAGAAAATGGTAATAGGAACATGTAGGATAATAGCCAACAAATTGCACCACATAACAAGCCACGTAGTGCCTTTGTTTCTAAGGTAAATACGCAAAGGGTGTAGAAGGCTATTCAGTATCAAATCAGGGACTGCAAAACGGCAATAAACAGCTGCAATTCTAGTGATTTCTTGGTTCTGATTTAAAACCAACATGAGAGGCTCCAAATTTAGCCAAAGAAATCCAATGGGAATAGTTGCGAAAAGCAAAATAAGAACCGTTCTTTGCAAAGTGAGAAACGCAATGGAAGAATTATGAGAACCAAAAGCCTGACTACAGAGTGGCTCCATGCCCATAGCCAAGCCCGAGAGAACTGAATAGCCAGTGATATTAGTGAAGCCAATAGCCAAAGAACCAGCTGCGAGATGGAGAGTTCCAAGTCTACCCATGCAAATAACAGAGATCATATTTTTGAGATATCCCACCAAACCCATTGCCAAAACAGGGAAGCCAATGTCAGCCATTTGCTTCAGCTCGTCAAGGACCTTCAAAAAAGGAGAGGAAACTCCATCAAGTTAGCAAAAAAAACAGGTACGCCATTAATAATAAATATATAGTGTTATTATTCTCTCTGCAAGGTTTTTTTTTCGTACCTCTGGCATTGTCGGGTACTTTTGGGACTTCTCTTCTGCAAGCATATTTTTTCCTTCCTTTACCCCTTGCTGTTTCTTTTTCCCCTGTGGCTTAGGAAAGAGAGAAAAAAAAGAAAAGAGAGAGAGAGAAGGGAGAAAGCAAAGTGAGTGTTAGGCATGCAAGGAAAAGATTTTAATTTATAGAGATGGGAATTGGACCAATTGGTGGGGGTCTCTTTTATATGCGTTTATGTGACATATTCTCTCTCCTTTAAAATGCATAAAGCCCCTCCTTTAGTTTTGCTTGCCTCCCCACCCCCATTAAAAGTTTTTCATTTCATGATTTTCATATACCAGGAGAATATTACTCAAACGTTTCCTTTTATTCTCTCTCTTTTTCATATGAATCAAACTTGATTTTTTTCGTGGAGTAAACAATTGATCTATCTATATTTATTTTTCTGATTATACGATATTGTCTATTTCTATCATGCTAGTGATATGAGAATTTGAAACCAAATACTAGCTTAACTTTTGGGACTTCTATTGTGATAAAAAAATTCACAACAAAAACTGTGAGAAAAATGATGATTTCCTATTGCAATTTTTATTTTTCACAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAACTAACCAAGAGAAAAATGGGGAAAACACAATAGAAAATTTTTATTGCAATATGGATGGACATTGCATGAGAGCTACAATAGACATGATCATCTCTAGTGTGGTAGTACGTTTTTGTGTTGGTAGAAGGTTAAATTTTAATGCATTTTTGAAGGCATGTCATTAATCATAAAGGTGTCTTTGAATGAGTCAGCCATACATAAATAAATAAATAAATAAAAAGACTTTGTACGTTAACCCATAAATGTAGGTATTATATACATGCTGCCATGGAAGAAAAGAAAAAAGAGAAGAGAAATCCATAAAATCAAACTAGTAATAACTAAAATTGCCAACAAAATATTCCATAGGCTCTCTTTTTATGGACAAAGTTTGCACTAAGTTTAATGTGGG

Coding sequence (CDS)

ATGGGCAGAACCGCCATTGTCAGCTCTAGAATTTCCTCGTCTTTTGTGAAAACTCTTCCCCATGTCCTTCTTCCAACAGTGGTCAATGCGAGCCCCATCAATGAGCCCACCAAGGCCAATCCAATTGCCACCACAGCCGCCAGTCGCGCCTTTTTAGGCCGGCCAGCACCGAGCTCGTGGCCGACTCTGGTCGAGACGGCAGCACTGAGAGCCATTGGTAATGTGTACATTAGCGAAGTTGTTTGGATTACGATGCCTGAAGTCGCAAGTGCAATACGTGGGTTATAG

Protein sequence

MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSWPTLVETAALRAIGNVYISEVVWITMPEVASAIRGL

Homology

[Close]

BLAST of Cmc11g0308731 vs. NCBI nr
Match: KAG5632929.1 (hypothetical protein H5410_004646 [Solanum commersonii])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 1  MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
          MGRT  VSSR S SFVKTLPH  LP VV+ +P  E  KA+P+A   A RA  GRPAPSS+
Sbjct: 1  MGRTVAVSSRTSLSFVKTLPHASLPMVVSMNPNVEVKKASPMAIPVAKRALAGRPAPSSF 60

Query: 61 PTLVETAALRAIGNVYISEVVWITMPEVAS 91
          PTL+ET ALRA GNVY+ +VV IT+ + AS
Sbjct: 61 PTLLETEALRAEGNVYMRDVVCITIADAAS 90

[Close]

BLAST of Cmc11g0308731 vs. NCBI nr
Match: KAG9153141.1 (hypothetical protein Leryth_012392 [Lithospermum erythrorhizon])

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-15
Identity = 56/95 (58.95%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 1   MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
           +G TA+VSSR S S VKTLPH   P VV+  P  E  KA  +AT+ A RA  G PAPSS 
Sbjct: 175 IGSTAVVSSRTSWSAVKTLPHSSFPRVVSKKPKLEVRKARTMATSVAMRALSGLPAPSSL 234

Query: 61  PTLVETAALRAIGNVYISEVVWITMPEVASAIRGL 96
           PTL E   LRA GNVYI +VV IT+ EVASA  GL
Sbjct: 235 PTLAEIDELRAEGNVYIRDVVCITIAEVASATSGL 269

[Close]

BLAST of Cmc11g0308731 vs. NCBI nr
Match: KAB8117772.1 (hypothetical protein EE612_060165 [Oryza sativa] >BAT17580.1 Os12g0552575 [Oryza sativa Japonica Group])

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12
Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 2   GRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSWP 61
           G T +VS  I  S V T  H   P VV+ SP +EP  A PIATT  + A LGRPAPSS+ 
Sbjct: 32  GSTLVVSDCIVGSVVNTWTHSPRPNVVHVSPTHEPIIAIPIATTNETWADLGRPAPSSFA 91

Query: 62  TLVETAALRAIGNVYISEVVWITMPEVASAIRG 95
           T VETA LR  G VY ++VVW+TM  VA+A+ G
Sbjct: 92  TRVETAELRVTGIVYNNDVVWMTMAAVANAVCG 124

[Close]

BLAST of Cmc11g0308731 vs. NCBI nr
Match: CAA7387749.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 39/73 (53.42%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 1   MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
           MG  A VSSRISSS VK+ PH     +V        T   P  TTAA+RA  GRPAPSS+
Sbjct: 61  MGSAAAVSSRISSSAVKSRPHRCRTAMVKPMARRPITAEQPRDTTAAARARAGRPAPSSF 120

Query: 61  PTLVETAALRAIG 74
           PT VET  LR  G
Sbjct: 121 PTRVETPRLREEG 133

[Close]

BLAST of Cmc11g0308731 vs. NCBI nr
Match: CAA7391859.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 1   MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
           +G TA VS  +  S V    H     +   S +   TK     T A  RA LGR APSS+
Sbjct: 59  IGSTAAVSPMMLGSAVNMAAHECRTDMAKPSAVRPSTKLQERPTRAEVRALLGRLAPSSF 118

Query: 61  PTLVETAALRAIGNVYISEVVWITMPEVASAIRGL 96
           PT VET  LR  G +Y+  VVW+ +P  A+   GL
Sbjct: 119 PTRVETPKLREEGKMYMKAVVWMRIPMEATVALGL 153

[Close]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL
Match: A0A3Q7EFZ7 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.1e-18
Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 1  MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
          MGRT  VSSR S SFVKTLPH  LP VV+ +P  E   A+P+A   A RA  GRPAPSS+
Sbjct: 1  MGRTVAVSSRTSLSFVKTLPHASLPMVVSMNPNVEVKNASPMAIPVAKRALAGRPAPSSF 60

Query: 61 PTLVETAALRAIGNVYISEVVWITMPEVASAIRG 95
          PTL+ET ALRA GNVY+ +VV IT+ + AS   G
Sbjct: 61 PTLLETEALRADGNVYMRDVVCITIADAASGTSG 94

[Close]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL
Match: A0A0P0YBL1 (Os12g0552575 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0552575 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13
Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 2   GRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSWP 61
           G T +VS  I  S V T  H   P VV+ SP +EP  A PIATT  + A LGRPAPSS+ 
Sbjct: 32  GSTLVVSDCIVGSVVNTWTHSPRPNVVHVSPTHEPIIAIPIATTNETWADLGRPAPSSFA 91

Query: 62  TLVETAALRAIGNVYISEVVWITMPEVASAIRG 95
           T VETA LR  G VY ++VVW+TM  VA+A+ G
Sbjct: 92  TRVETAELRVTGIVYNNDVVWMTMAAVANAVCG 124

[Close]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL
Match: A0A7I8JVL1 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_01000128 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.7e-06
Identity = 39/73 (53.42%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 1   MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
           MG  A VSSRISSS VK+ PH     +V        T   P  TTAA+RA  GRPAPSS+
Sbjct: 61  MGSAAAVSSRISSSAVKSRPHRCRTAMVKPMARRPITAEQPRDTTAAARARAGRPAPSSF 120

Query: 61  PTLVETAALRAIG 74
           PT VET  LR  G
Sbjct: 121 PTRVETPRLREEG 133

[Close]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL
Match: A0A7I8K418 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_02003073 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 38/95 (40.00%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 1   MGRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSW 60
           +G TA VS  +  S V    H     +   S +   TK     T A  RA LGR APSS+
Sbjct: 59  IGSTAAVSPMMLGSAVNMAAHECRTDMAKPSAVRPSTKLQERPTRAEVRALLGRLAPSSF 118

Query: 61  PTLVETAALRAIGNVYISEVVWITMPEVASAIRGL 96
           PT VET  LR  G +Y+  VVW+ +P  A+   GL
Sbjct: 119 PTRVETPKLREEGKMYMKAVVWMRIPMEATVALGL 153

[Close]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL
Match: A0A5A7Q5K6 (Gamma-glutamyl hydrolase 2 OS=Striga asiatica OX=4170 GN=STAS_17196 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-05
Identity = 38/85 (44.71%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 2   GRTAIVSSRISSSFVKTLPHVLLPTVVNASPINEPTKANPIATTAASRAFLGRPAPSSWP 61
           G TA V++ IS S VKTL H  L      S  N         TTAA RA  G PAP+S+P
Sbjct: 59  GSTADVTATISPSAVKTLAHTFLTPNAKTSAKNPNKNPATKPTTAAFRALPGLPAPNSFP 118

Query: 62  TLVETAALRAIGNVYISEVVWITMP 87
           TLV+T  L   G  Y ++VV I++P
Sbjct: 119 TLVDTPKLNDEGKTYTNDVVCISIP 143

The following BLAST results are available for this feature:

BLAST of Cmc11g0308731 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG5632929.1	1.1e-17	62.22	hypothetical protein H5410_004646 [Solanum commersonii]	[more]
KAG9153141.1	3.8e-15	58.95	hypothetical protein Leryth_012392 [Lithospermum erythrorhizon]	[more]
KAB8117772.1	1.3e-12	53.76	hypothetical protein EE612_060165 [Oryza sativa] >BAT17580.1 Os12g0552575 [Oryza...	[more]
CAA7387749.1	1.6e-05	53.42	unnamed protein product [Spirodela intermedia]	[more]
CAA7391859.1	3.5e-05	40.00	unnamed protein product [Spirodela intermedia]	[more]

BLAST of Cmc11g0308731 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A3Q7EFZ7	5.1e-18	59.57	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]
A0A0P0YBL1	6.5e-13	53.76	Os12g0552575 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0552575 PE...	[more]
A0A7I8JVL1	7.7e-06	53.42	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_01000128 PE=4 SV...	[more]
A0A7I8K418	1.7e-05	40.00	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_02003073 PE=4 SV...	[more]
A0A5A7Q5K6	2.9e-05	44.71	Gamma-glutamyl hydrolase 2 OS=Striga asiatica OX=4170 GN=STAS_17196 PE=4 SV=1	[more]

BLAST of Cmc11g0308731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0308731.1	Cmc11g0308731.1	mRNA