Cmc11g0308481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	C2 domain-containing protein
Location	CMiso1.1chr11: 29491148 .. 29491864 (+)
RNA-Seq Expression	Cmc11g0308481
Synteny	Cmc11g0308481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACAAATCATTTTATGGTCATCTCAAGCTGATCAACTTTCTTCCTGATCTTTTTATTTATATTGTTTTCAAAACAATATATATAATAAAAATGAGTTACTTAATTCTAGAAATGAATGTCATCTCTGTAGAAGGGCTTGAGGAACTCATTTCTTCTCCAAATTTGAGTGTTTATGTGATGGTTATACTAAAAGGGGCTTCTTTGAAGGAACAAAATGCAAACACCCACATGGTTGAAGGAGGCCAAAATCCTATATGGAATTTTGCAGTGAAATTCTTCATTGATAGAAGTAAGCAAATTCAAGCTCTAAAATCTCTTCTTATGTTCTCTATCATATCCAAAAACAATGATGAACACAAAAATGTTGGCCGAATCAATGTGCCAATTGTAGAGCTCTTCCAAATTTTTAAACATAAGGACTCTTTCGAAAGCCTTTCCTATTCTGTCAAGAAAATTTCAGGACACACCACTAATGGAACGTTCAAATTTAAATTCAAATTTGTACAACCAAAAGCTGATCAATTGCAATCACTACGTAAGTCATCGTTGTCGTCGTCGTCGTCTACCCGCCCGTCTGATCAGGTAGGAACTTTCCTCTCCCATACTAAATGTTGTTAAAACTTAAAACTTGCTTTTATCAACGCTAGAACATGGTGGTCAGCATATGATCCCATCTTTGTCGAGACCAATATCGTTAACTTTTTTTCCTTT

mRNA sequence

ATGGCTAACAAATCATTTTATGGTCATCTCAAGCTGATCAACTTTCTTCCTGATCTTTTTATTTATATTGTTTTCAAAACAATATATATAATAAAAATGAGTTACTTAATTCTAGAAATGAATGTCATCTCTGTAGAAGGGCTTGAGGAACTCATTTCTTCTCCAAATTTGAGTGTTTATGTGATGGTTATACTAAAAGGGGCTTCTTTGAAGGAACAAAATGCAAACACCCACATGGTTGAAGGAGGCCAAAATCCTATATGGAATTTTGCAGTGAAATTCTTCATTGATAGAAGACACACCACTAATGGAACGTTCAAATTTAAATTCAAATTTGTACAACCAAAAGCTGATCAATTGCAATCACTACGTAAGTCATCGTTGTCGTCGTCGTCGTCTACCCGCCCGTCTGATCAGGTAGGAACTTTCCTCTCCCATACTAAATGTTGTTAAAACTTAAAACTTGCTTTTATCAACGCTAGAACATGGTGGTCAGCATATGATCCCATCTTTGTCGAGACCAATATCGTTAACTTTTTTTCCTTT

Coding sequence (CDS)

ATGGCTAACAAATCATTTTATGGTCATCTCAAGCTGATCAACTTTCTTCCTGATCTTTTTATTTATATTGTTTTCAAAACAATATATATAATAAAAATGAGTTACTTAATTCTAGAAATGAATGTCATCTCTGTAGAAGGGCTTGAGGAACTCATTTCTTCTCCAAATTTGAGTGTTTATGTGATGGTTATACTAAAAGGGGCTTCTTTGAAGGAACAAAATGCAAACACCCACATGGTTGAAGGAGGCCAAAATCCTATATGGAATTTTGCAGTGAAATTCTTCATTGATAGAAGACACACCACTAATGGAACGTTCAAATTTAAATTCAAATTTGTACAACCAAAAGCTGATCAATTGCAATCACTACGTAAGTCATCGTTGTCGTCGTCGTCGTCTACCCGCCCGTCTGATCAGGTAGGAACTTTCCTCTCCCATACTAAATGTTGTTAA

Protein sequence

MANKSFYGHLKLINFLPDLFIYIVFKTIYIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAVKFFIDRRHTTNGTFKFKFKFVQPKADQLQSLRKSSLSSSSSTRPSDQVGTFLSHTKCC

Homology

[Close]

BLAST of Cmc11g0308481 vs. NCBI nr
Match: XP_008458456.1 (PREDICTED: uncharacterized protein LOC103497858 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-37
Identity = 101/164 (61.59%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 33  MSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV 92
           MSYLILEMNVISVEGLEE ISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV
Sbjct: 1   MSYLILEMNVISVEGLEEFISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV 60

Query: 93  KFFIDRR----------------------------------------------------- 140
           KFFIDR                                                      
Sbjct: 61  KFFIDRSKQIQALKSLLMFSIISKNNDEHKNVGQINVPIVELFQIFKHKDSFESLSCSVK 120

[Close]

BLAST of Cmc11g0308481 vs. NCBI nr
Match: KGN47186.1 (hypothetical protein Csa_020900 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 8.0e-20
Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 33 MSYLILEMNVISVEGLEEL--ISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNF 92
          MSY ILEMNVI VEGLEEL  ISSPNLSVYVMV+LKGASLK+QNANT+MVEGGQNP WN+
Sbjct: 1  MSYFILEMNVICVEGLEELNQISSPNLSVYVMVLLKGASLKDQNANTNMVEGGQNPSWNY 60

Query: 93 AVKFFID 98
           VKF ID
Sbjct: 61 TVKFVID 67

[Close]

BLAST of Cmc11g0308481 vs. NCBI nr
Match: TYI12438.1 (hypothetical protein ES332_A09G278000v1 [Gossypium tomentosum])

HSP 1 Score: 58.9 bits (141), Expect = 4.3e-05
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 26  KTIYIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQN 85
           K  +++ M++  L++NVIS +GL+ +     + VY +V LKG S K++       + G+N
Sbjct: 44  KPSFLVAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKLKTLVHKDCGKN 103

Query: 86  PIWNFAVKFFIDRRHTTNGTFKFKFKFV 114
           P WNF VKF +D     N     KFK +
Sbjct: 104 PNWNFPVKFTVDESLAKNNKLSIKFKIM 131

[Close]

BLAST of Cmc11g0308481 vs. NCBI nr
Match: TYH56026.1 (hypothetical protein ES332_D09G279100v1 [Gossypium tomentosum])

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-05
Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 29  YIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIW 88
           ++I M++  L++NVIS +GL+ +     + VY +V LKG S K+++      + G+ P W
Sbjct: 82  FLIAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKSKTPVHKDCGKTPNW 141

Query: 89  NFAVKFFIDRRHTTNGTFKFKFKFV 114
           NF VKF +D     N     KFK +
Sbjct: 142 NFPVKFTVDESLAKNNKLSIKFKIM 166

[Close]

BLAST of Cmc11g0308481 vs. NCBI nr
Match: XP_012487512.1 (PREDICTED: formin-A [Gossypium raimondii])

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 29  YIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIW 88
           ++I M++  L++NVIS +GL+ +     + VY +V LKG S K++       + G+ P W
Sbjct: 50  FLIAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKLKTPVHKDCGKTPNW 109

Query: 89  NFAVKFFIDRRHTTNGTFKFKFKFV 114
           NF VKF +D     N     KFK +
Sbjct: 110 NFPVKFTVDESLAKNNKLSIKFKIM 134

[Close]

BLAST of Cmc11g0308481 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05
Identity = 26/85 (30.59%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 33  MSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHM-VEGGQNPIWNFA 92
           M Y  LE+N+IS + ++ +     + VY  V L G  L  Q A TH+  + G NP WN+ 
Sbjct: 3   MEYRTLELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWNYP 62

Query: 93  VKFFIDRRHTTNGTFKFKFKFVQPK 117
           VKF ++           + K +  +
Sbjct: 63  VKFSVNESLAKENRLSLEIKLISDR 87

[Close]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL
Match: A0A1S3C7E1 (uncharacterized protein LOC103497858 OS=Cucumis melo OX=3656 GN=LOC103497858 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 101/164 (61.59%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 33  MSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV 92
           MSYLILEMNVISVEGLEE ISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV
Sbjct: 1   MSYLILEMNVISVEGLEEFISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNFAV 60

Query: 93  KFFIDRR----------------------------------------------------- 140
           KFFIDR                                                      
Sbjct: 61  KFFIDRSKQIQALKSLLMFSIISKNNDEHKNVGQINVPIVELFQIFKHKDSFESLSCSVK 120

[Close]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL
Match: A0A0A0KHD7 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G194700 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.9e-20
Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 33 MSYLILEMNVISVEGLEEL--ISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIWNF 92
          MSY ILEMNVI VEGLEEL  ISSPNLSVYVMV+LKGASLK+QNANT+MVEGGQNP WN+
Sbjct: 1  MSYFILEMNVICVEGLEELNQISSPNLSVYVMVLLKGASLKDQNANTNMVEGGQNPSWNY 60

Query: 93 AVKFFID 98
           VKF ID
Sbjct: 61 TVKFVID 67

[Close]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL
Match: A0A5D2P884 (C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G278000v1 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.1e-05
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 26  KTIYIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQN 85
           K  +++ M++  L++NVIS +GL+ +     + VY +V LKG S K++       + G+N
Sbjct: 44  KPSFLVAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKLKTLVHKDCGKN 103

Query: 86  PIWNFAVKFFIDRRHTTNGTFKFKFKFV 114
           P WNF VKF +D     N     KFK +
Sbjct: 104 PNWNFPVKFTVDESLAKNNKLSIKFKIM 131

[Close]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL
Match: A0A5D2JNJ1 (C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G279100v1 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05
Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 29  YIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIW 88
           ++I M++  L++NVIS +GL+ +     + VY +V LKG S K+++      + G+ P W
Sbjct: 82  FLIAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKSKTPVHKDCGKTPNW 141

Query: 89  NFAVKFFIDRRHTTNGTFKFKFKFV 114
           NF VKF +D     N     KFK +
Sbjct: 142 NFPVKFTVDESLAKNNKLSIKFKIM 166

[Close]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL
Match: A0A5J5Q8S5 (C2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G261100v1 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 29  YIIKMSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMVEGGQNPIW 88
           ++I M++  L++NVIS +GL+ +     + VY +V LKG S K++       + G+ P W
Sbjct: 58  FLIAMAFRTLDINVISAKGLKNVNLIDKMDVYAVVSLKGDSSKQKLKTPVHKDCGKTPNW 117

Query: 89  NFAVKFFIDRRHTTNGTFKFKFKFV 114
           NF VKF +D     N     KFK +
Sbjct: 118 NFPVKFTVDESLAKNNKLSIKFKIM 142

[Close]

BLAST of Cmc11g0308481 vs. TAIR 10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 20/76 (26.32%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 38  LEMNVISVEGLEELISSPNLSVYVMVILKGASLKEQNANTHMV--EGGQNPIWNFAVKFF 97
           LE+ ++S   +  + ++  + VY +V + G + +++ A    +  +GG NP WN  VKF 
Sbjct: 41  LELKIVSASDVNHIDATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTWNHTVKFS 100

Query: 98  IDRRHTTNGTFKFKFK 112
           ++ R    G      K
Sbjct: 101 VNEREANEGLLTITVK 116

[Close]

BLAST of Cmc11g0308481 vs. TAIR 10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 24/74 (32.43%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 33  MSYLILEMNVISVEGLEELISSPNLSVYVMVILKGASL-KEQNANTHMVE-GGQNPIWNF 92
           M+ L LE+N+ S   L  +     ++V+  + + G +  K+Q A T +   GG NP WN 
Sbjct: 1   MANLTLELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQ 60

Query: 93  AVKFFIDRRHTTNG 105
            +KF +D R    G
Sbjct: 61  TIKFSVDERSARGG 74

The following BLAST results are available for this feature:

BLAST of Cmc11g0308481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458456.1	3.2e-37	61.59	PREDICTED: uncharacterized protein LOC103497858 [Cucumis melo]	[more]
KGN47186.1	8.0e-20	83.58	hypothetical protein Csa_020900 [Cucumis sativus]	[more]
TYI12438.1	4.3e-05	35.23	hypothetical protein ES332_A09G278000v1 [Gossypium tomentosum]	[more]
TYH56026.1	9.5e-05	35.29	hypothetical protein ES332_D09G279100v1 [Gossypium tomentosum]	[more]
XP_012487512.1	2.8e-04	35.29	PREDICTED: formin-A [Gossypium raimondii]	[more]

BLAST of Cmc11g0308481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04133	2.0e-05	30.59	Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1	[more]

BLAST of Cmc11g0308481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7E1	1.6e-37	61.59	uncharacterized protein LOC103497858 OS=Cucumis melo OX=3656 GN=LOC103497858 PE=...	[more]
A0A0A0KHD7	3.9e-20	83.58	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G194700 PE=4 SV=...	[more]
A0A5D2P884	2.1e-05	35.23	C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G27800...	[more]
A0A5D2JNJ1	4.6e-05	35.29	C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G27910...	[more]
A0A5J5Q8S5	1.3e-04	35.29	C2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G261100...	[more]

BLAST of Cmc11g0308481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15740.1	1.3e-04	26.32	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15755.1	5.0e-04	32.43	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 30..124 e-value: 1.8E-5 score: 26.4
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 34..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0308481.1	Cmc11g0308481.1	mRNA