Cmc11g0308371 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308371
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CW-type domain-containing protein
Location	CMiso1.1chr11: 29425420 .. 29427247 (+)
RNA-Seq Expression	Cmc11g0308371
Synteny	Cmc11g0308371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGCCCACACTGAGAAGAGGAGAAAAGTGAGAGAAATTTTTGGAGGAAATAATATATTTTCATCAGACGGCGGGCGGAGAATTTTTTCTCTCTTTTCTTTAGGCGGAAATCGGAATAATATAAGAACTTGAAAATCTAGTAAAAAAGAAAAAAAAAAAGAAAAAAACCCCGGAAAATCCAAACCCCAGTTCGCTTTCTTTCTACGATCATCAACTTTTCCTTGTCAAAACTCCGAAAATTTGGAACTACGAGCTCCTTCGAACCCCAATCGAATCATTGTTTCTCCTTTTTTTTGGCTTCAATCTCTTCTGGGGTTTTGTTAGATTACTCCAATAACATCAACAGTACGATCGTTTTCGCTGATCGTTCTGTTCAAGAGGAGCCGGTATCGATTTTTCTTCCTCTGATAAGGGTTTCGGTTTTGTTTTTGGTAGCGAGAGAGAAGTGCTTCGATTAAATCTGGTTTCTGGGTGTTTTTTTTTTGTTTTGATTGTCGTTCTTTTCTTATTAGAATGATACTGGATTTTAGGGAAGATGATTATTGGAACTAGGGTTTTGGGTTCACATTTAATGGTGGGCTCTGTTGAGCCGATGATGATGGGGGATTGCATTGAGATGGAAGAAGGCGAAGCTTCTTGCTATCACAAGGATAATGGCGGTGATATTGACCCTGACATTAATCTCTCTTACATCGTAAGAATTTTTTCTTAAGTGTTAGAATTTATTGCCGGATTGTGACTTGTTTCTTGAATGACCCAGTGAACAAAAATCATTCTAAACTAGATTACTTGGAAGGTTTATGTAGTCTGTTTCATCATATCAATGAATGGGGTTCCTCCAAAAAGCTCAATCTTTTGCTTTTTGGTTGAGGTATATAACCAGCAACACTGCACAATGTTGGCCTTGAAGAGGCAAGGCATAACCCTTGAGGCAGTATGAATTGTAAATCATAACTAAAATCATCTAACAAATCCTAAATGAGTGTAACCAATTATTGTTAAACATAACAGTCATAAAGAGAACATAAAGTTGTTTAAAACATTGTTGCTACATTGCCTCTTCTGTGAGAGGCATAAGCTTCTTGTGGTTCAAAGGAGACACGAGTTTCGAGGCTAAAAGTTAAAATGTTGGCTTAAGACGAGCCTCAGGGAATAAGCGTCAGTTTAAACATGTACTGGAAAAAAAGAAAAGAACATGTGGAGGCTCAGTAGAATTATTTGGTTTGATGAAGTTGAATTATTAGTTTTGTTTGTTTGAATAGACTTCACTTTCTAAATAAATTTCCTAGTTGATCAGTTGAAATGAAATGAGATGGAATTCAAAATTGTATAACATCACGGGTTTTGTTTGCTTGAAAAGAATCCCTAGATAATTACTTTGGCACTTTTCTTTCTTTGATCAGCTGGGACGCCATAGTTACCCTGAAAAAGAAGTTAATTTGTTTTTTGTTTATTTACCACTTGTACATATTCGTAATTTTTTGCTTATTTGATTAACCAGACATCCTATTATTATCATGTTTAGGATGAGAAGATCGAGCGTTTTCTTGGTCACTTCCAAAAAGACTTTGAAGGTGGAGTTTCAGCTGAAAAGTTAGGTGAGTTGCCAAGTTTTCAGATTATAGAACACAAACTGCTGTTAGGTTGACCGGCCTGTGCTTTTGAAATAATCATATATGGGTTTCTAATTTGTTATTAGGGGCAAAGTATGGTGGTTATGGCTCATTTTTGCCTACATATGAACGCCCTTCTTCAATTTTGCCACACAATTTAAATCAACAGAGAGACTGCAATGCAGCACCACCTCCCGTTAATTTTCCCTTGGAG

mRNA sequence

TTAAGCCCACACTGAGAAGAGGAGAAAAGTGAGAGAAATTTTTGGAGGAAATAATATATTTTCATCAGACGGCGGGCGGAGAATTTTTTCTCTCTTTTCTTTAGGCGGAAATCGGAATAATATAAGAACTTGAAAATCTAGTAAAAAAGAAAAAAAAAAAGAAAAAAACCCCGGAAAATCCAAACCCCAGTTCGCTTTCTTTCTACGATCATCAACTTTTCCTTGTCAAAACTCCGAAAATTTGGAACTACGAGCTCCTTCGAACCCCAATCGAATCATTGTTTCTCCTTTTTTTTGGCTTCAATCTCTTCTGGGGTTTTGTTAGATTACTCCAATAACATCAACAGTACGATCGTTTTCGCTGATCGTTCTGTTCAAGAGGAGCCGGGAAGATGATTATTGGAACTAGGGTTTTGGGTTCACATTTAATGGTGGGCTCTGTTGAGCCGATGATGATGGGGGATTGCATTGAGATGGAAGAAGGCGAAGCTTCTTGCTATCACAAGGATAATGGCGGTGATATTGACCCTGACATTAATCTCTCTTACATCGATGAGAAGATCGAGCGTTTTCTTGGTCACTTCCAAAAAGACTTTGAAGGTGGAGTTTCAGCTGAAAAGGGCAAAGTATGGTGGTTATGGCTCATTTTTGCCTACATATGAACGCCCTTCTTCAATTTTGCCACACAATTTAAATCAACAGAGAGACTGCAATGCAGCACCACCTCCCGTTAATTTTCCCTTGGAG

Coding sequence (CDS)

ATGATTATTGGAACTAGGGTTTTGGGTTCACATTTAATGGTGGGCTCTGTTGAGCCGATGATGATGGGGGATTGCATTGAGATGGAAGAAGGCGAAGCTTCTTGCTATCACAAGGATAATGGCGGTGATATTGACCCTGACATTAATCTCTCTTACATCGATGAGAAGATCGAGCGTTTTCTTGGTCACTTCCAAAAAGACTTTGAAGGTGGAGTTTCAGCTGAAAAGGGCAAAGTATGGTGGTTATGGCTCATTTTTGCCTACATATGA

Protein sequence

MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERFLGHFQKDFEGGVSAEKGKVWWLWLIFAYI

Homology

[Close]

BLAST of Cmc11g0308371 vs. NCBI nr
Match: XP_008458474.1 (PREDICTED: uncharacterized protein LOC103497870 [Cucumis melo])

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. NCBI nr
Match: XP_004143198.1 (uncharacterized protein LOC101222407 [Cucumis sativus] >KGN47195.1 hypothetical protein Csa_020680 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.4e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMV SVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVSSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. NCBI nr
Match: XP_038874609.1 (cysteine-tryptophan domain-containing zinc finger protein 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPMMMGDCI+MEE EASCYHKDNGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIDMEEDEASCYHKDNGGDIDPDITLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. NCBI nr
Match: XP_038874610.1 (cysteine-tryptophan domain-containing zinc finger protein 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPMMMGDCI+MEE EASCYHKDNGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIDMEEDEASCYHKDNGGDIDPDITLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. NCBI nr
Match: XP_023006158.1 (uncharacterized protein LOC111498978 isoform X2 [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 2.2e-33
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPM++GDCI+MEEGEASCYHK+NGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMIIGDCIDMEEGEASCYHKENGGDIDPDIALSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. ExPASy Swiss-Prot
Match: A0A0P0X9Z7 (Cysteine-tryptophan domain-containing zinc finger protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=CWZF7 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.6e-10
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 22 MGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERFLGHFQKDFEGGVSAE 76
          M D  E+EEGEA     D    +DPD+ LSYIDEKI+  LGHFQKDFEG VSAE
Sbjct: 25 MEDDAELEEGEAC---GDETAFVDPDVALSYIDEKIQDVLGHFQKDFEGAVSAE 75

[Close]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL
Match: A0A1S3C961 (uncharacterized protein LOC103497870 OS=Cucumis melo OX=3656 GN=LOC103497870 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL
Match: A0A0A0KBV9 (CW-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G197740 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMV SVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVSSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL
Match: A0A6J1KV49 (uncharacterized protein LOC111498978 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498978 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPM++GDCI+MEEGEASCYHK+NGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMIIGDCIDMEEGEASCYHKENGGDIDPDIALSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL
Match: A0A6J1H733 (uncharacterized protein LOC111460215 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460215 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPM++GDCI+MEEGEASCYHK+NGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMIIGDCIDMEEGEASCYHKENGGDIDPDIALSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL
Match: A0A6J1L454 (uncharacterized protein LOC111498978 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498978 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MIIGTRVLGSHLMVGSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERF 60
          MIIGTRVLGSHLMVGSVEPM++GDCI+MEEGEASCYHK+NGGDIDPDI LSYIDEKIERF
Sbjct: 1  MIIGTRVLGSHLMVGSVEPMIIGDCIDMEEGEASCYHKENGGDIDPDIALSYIDEKIERF 60

Query: 61 LGHFQKDFEGGVSAEK 77
          LGHFQKDFEGGVSAEK
Sbjct: 61 LGHFQKDFEGGVSAEK 76

[Close]

BLAST of Cmc11g0308371 vs. TAIR 10
Match: AT3G62900.1 (CW-type Zinc Finger )

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11
Identity = 35/61 (57.38%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 27 EMEEGEASCYHKDN--GGDIDPDINLSYI----------DEKIERFLGHFQKDFEGGVSA 76
          E+EEGEA  Y+  N   G IDPD +LSYI          DEK++  LGHFQKDFEGGVSA
Sbjct: 5  ELEEGEACSYNITNEYAGSIDPDNDLSYIVSTSFSAALRDEKLQHILGHFQKDFEGGVSA 64

[Close]

BLAST of Cmc11g0308371 vs. TAIR 10
Match: AT1G02990.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1). )

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-10
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 15 GSVEPMMMGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERFLGHFQKDFEGGVSA 74
          G +   +M DC + EE     Y       +DPD+ LSYIDEK+E  LGHFQKDFEGGVSA
Sbjct: 18 GGLGEEIMQDC-DFEEESTHSY----VSCVDPDVALSYIDEKLENVLGHFQKDFEGGVSA 73

Query: 75 E 76
          E
Sbjct: 78 E 73

[Close]

BLAST of Cmc11g0308371 vs. TAIR 10
Match: AT4G15730.1 (CW-type Zinc Finger )

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-06
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 22 MGDCIEMEEGEASCYHKDNGGDIDPDINLSYIDEKIERFLGHFQKDF 69
          MG+  E+EEGE +C    +   +D D++LSYID+K++  LGH QK F
Sbjct: 1  MGEDYELEEGEMNC--SSDEAVVDLDVDLSYIDKKVQNVLGHLQKGF 45

The following BLAST results are available for this feature:

BLAST of Cmc11g0308371 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458474.1	4.7e-36	100.00	PREDICTED: uncharacterized protein LOC103497870 [Cucumis melo]	[more]
XP_004143198.1	2.4e-35	98.68	uncharacterized protein LOC101222407 [Cucumis sativus] >KGN47195.1 hypothetical ...	[more]
XP_038874609.1	3.4e-34	96.05	cysteine-tryptophan domain-containing zinc finger protein 3-like isoform X1 [Ben...	[more]
XP_038874610.1	3.4e-34	96.05	cysteine-tryptophan domain-containing zinc finger protein 3-like isoform X2 [Ben...	[more]
XP_023006158.1	2.2e-33	93.42	uncharacterized protein LOC111498978 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cmc11g0308371 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A0P0X9Z7	3.6e-10	62.96	Cysteine-tryptophan domain-containing zinc finger protein 7 OS=Oryza sativa subs...	[more]

BLAST of Cmc11g0308371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C961	2.3e-36	100.00	uncharacterized protein LOC103497870 OS=Cucumis melo OX=3656 GN=LOC103497870 PE=...	[more]
A0A0A0KBV9	1.1e-35	98.68	CW-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G197740 PE=...	[more]
A0A6J1KV49	1.1e-33	93.42	uncharacterized protein LOC111498978 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H733	1.1e-33	93.42	uncharacterized protein LOC111460215 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L454	1.1e-33	93.42	uncharacterized protein LOC111498978 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cmc11g0308371 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62900.1	5.6e-11	57.38	CW-type Zinc Finger	[more]
AT1G02990.3	2.1e-10	54.10	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G15730.1	4.2e-06	46.81	CW-type Zinc Finger	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46524:SF12	CW-TYPE ZINC-FINGER PROTEIN	coord: 21..76
None	No IPR available	PANTHER	PTHR46524	CW-TYPE ZINC FINGER	coord: 21..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0308371.1	Cmc11g0308371.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding