Cmc11g0307911 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307911
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	CMiso1.1chr11: 29113985 .. 29114299 (+)
RNA-Seq Expression	Cmc11g0307911
Synteny	Cmc11g0307911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAACCTATTGGCTTCCAAGACAAAACATGTCCCAATCATGTGTGTCTCCTACGCAAGAGTCTTTATGGTCTCAAACAGACCCCTCGTGCTTGGTTTGAAAACTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACCGTAGATACCTCGTTATTCATTCGATCAGTCGGATCTTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTCATACATTTCTTTTCTTAAAAACCAATTGGCCCTAGAATTCAAAATATCCGACCTTAGTCCTTTAAAGTAA

mRNA sequence

ATGTCTCAACCTATTGGCTTCCAAGACAAAACATGTCCCAATCATGTGTGTCTCCTACGCAAGAGTCTTTATGGTCTCAAACAGACCCCTCGTGCTTGGTTTGAAAACTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACCGTAGATACCTCGTTATTCATTCGATCAGTCGGATCTTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTCATACATTTCTTTTCTTAAAAACCAATTGGCCCTAGAATTCAAAATATCCGACCTTAGTCCTTTAAAGTAA

Coding sequence (CDS)

ATGTCTCAACCTATTGGCTTCCAAGACAAAACATGTCCCAATCATGTGTGTCTCCTACGCAAGAGTCTTTATGGTCTCAAACAGACCCCTCGTGCTTGGTTTGAAAACTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACCGTAGATACCTCGTTATTCATTCGATCAGTCGGATCTTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTCATACATTTCTTTTCTTAAAAACCAATTGGCCCTAGAATTCAAAATATCCGACCTTAGTCCTTTAAAGTAA

Protein sequence

MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSVGSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK

Homology

[Close]

BLAST of Cmc11g0307911 vs. NCBI nr
Match: KAA0061282.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 9.4e-44
Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP GFQ+KTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVAST D SLFIRSV
Sbjct: 423 MTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSV 482

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYVDDIIV GPDY YIS LKNQLALEFKISDL PLK
Sbjct: 483 GSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLK 526

[Close]

BLAST of Cmc11g0307911 vs. NCBI nr
Match: TYK00083.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 8.8e-42
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           MSQP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE+FTSYLFTLGFV S  D SLFIRSV
Sbjct: 106 MSQPTAFQDKTCPNHVCLLHKSLYGLKQAPRAWFESFTSYLFTLGFVVSNADPSLFIRSV 165

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYVDDIIV GPD SYIS LK QLALEF+ISDL PLK
Sbjct: 166 GSSLTYLLLYVDDIIVTGPDSSYISLLKTQLALEFQISDLGPLK 209

[Close]

BLAST of Cmc11g0307911 vs. NCBI nr
Match: TYJ97594.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVASTVD SLFIRSV
Sbjct: 303 MAQPTSFQDKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTVDPSLFIRSV 362

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GS LTYLLLYV DIIV GP+Y YIS LKNQLALEFKISD  PLK
Sbjct: 363 GSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLK 406

[Close]

BLAST of Cmc11g0307911 vs. NCBI nr
Match: KAA0056771.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVASTVD SLFIRSV
Sbjct: 303 MAQPTSFQDKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTVDPSLFIRSV 362

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GS LTYLLLYV DIIV GP+Y YIS LKNQLALEFKISD  PLK
Sbjct: 363 GSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLK 406

[Close]

BLAST of Cmc11g0307911 vs. NCBI nr
Match: KAA0057165.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 88/104 (84.62%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP GFQDKTCPNHVCLL KSLYGLKQ PRAWFE F SYLFTL FVAST D SLFIRSV
Sbjct: 61  MAQPTGFQDKTCPNHVCLLYKSLYGLKQAPRAWFERFRSYLFTLDFVASTADPSLFIRSV 120

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYV +IIV GPDY YI  LKNQLALEFKISDL PLK
Sbjct: 121 GSSLTYLLLYVGNIIVAGPDYLYIFVLKNQLALEFKISDLGPLK 164

[Close]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.5e-23
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 1    MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
            MSQP GF DK  PN+VC LRK+LYGLKQ PRAW+    +YL T+GFV S  DTSLF+   
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140

Query: 61   GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISD 100
            G S+ Y+L+YVDDI++ G D + +    + L+  F + D
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKD 1179

[Close]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.0e-21
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 1    MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
            MSQP GF DK  P++VC LRK++YGLKQ PRAW+    +YL T+GFV S  DTSLF+   
Sbjct: 1064 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1123

Query: 61   GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISD 100
            G S+ Y+L+YVDDI++ G D   +    + L+  F + +
Sbjct: 1124 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKE 1162

[Close]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 1    MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
            M QP GF+     + VC L KSLYGLKQ PR W+  F S++ +  ++ +  D  ++ +  
Sbjct: 938  MEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 997

Query: 61   G-SSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSP 103
              ++   LLLYVDD++++G D   I+ LK  L+  F + DL P
Sbjct: 998  SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

[Close]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 8.4e-11
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 14   NHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSVG--SSLTYLLLYV 73
            ++VC L K++YGLKQ  R WFE F   L    FV S+VD  ++I   G  +   Y+LLYV
Sbjct: 1029 DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYV 1088

Query: 74   DDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
            DD+++   D + ++  K  L  +F+++DL+ +K
Sbjct: 1089 DDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIK 1121

[Close]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-09
Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           + QP GF ++  P++V  L   +YGLKQ P  W E+  + L  +GF     +  L+ RS 
Sbjct: 18  VKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRST 77

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDL 101
                Y+ +YVDD++V  P       +K +L   + + DL
Sbjct: 78  SDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDL 117

[Close]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL
Match: A0A5A7UZE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00300 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.6e-44
Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP GFQ+KTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVAST D SLFIRSV
Sbjct: 423 MTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSV 482

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYVDDIIV GPDY YIS LKNQLALEFKISDL PLK
Sbjct: 483 GSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLK 526

[Close]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL
Match: A0A5D3BJZ6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00340 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           MSQP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE+FTSYLFTLGFV S  D SLFIRSV
Sbjct: 106 MSQPTAFQDKTCPNHVCLLHKSLYGLKQAPRAWFESFTSYLFTLGFVVSNADPSLFIRSV 165

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYVDDIIV GPD SYIS LK QLALEF+ISDL PLK
Sbjct: 166 GSSLTYLLLYVDDIIVTGPDSSYISLLKTQLALEFQISDLGPLK 209

[Close]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL
Match: A0A5D3BEU0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00250 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.3e-42
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVASTVD SLFIRSV
Sbjct: 303 MAQPTSFQDKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTVDPSLFIRSV 362

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GS LTYLLLYV DIIV GP+Y YIS LKNQLALEFKISD  PLK
Sbjct: 363 GSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLK 406

[Close]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL
Match: A0A5A7UTE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00610 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.3e-42
Identity = 89/104 (85.58%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP  FQDKTCPNHVCLL KSLYGLKQ PRAWFE FTSYLFTLGFVASTVD SLFIRSV
Sbjct: 303 MAQPTSFQDKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTVDPSLFIRSV 362

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GS LTYLLLYV DIIV GP+Y YIS LKNQLALEFKISD  PLK
Sbjct: 363 GSPLTYLLLYVYDIIVTGPNYLYISVLKNQLALEFKISDFGPLK 406

[Close]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL
Match: A0A5D3DUH6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00270 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.2e-41
Identity = 88/104 (84.62%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSQPIGFQDKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSV 60
           M+QP GFQDKTCPNHVCLL KSLYGLKQ PRAWFE F SYLFTL FVAST D SLFIRSV
Sbjct: 61  MAQPTGFQDKTCPNHVCLLYKSLYGLKQAPRAWFERFRSYLFTLDFVASTADPSLFIRSV 120

Query: 61  GSSLTYLLLYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           GSSLTYLLLYV +IIV GPDY YI  LKNQLALEFKISDL PLK
Sbjct: 121 GSSLTYLLLYVGNIIVAGPDYLYIFVLKNQLALEFKISDLGPLK 164

[Close]

BLAST of Cmc11g0307911 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 9   DKTCPNHVCLLRKSLYGLKQTPRAWFENFTSYLFTLGFVASTVDTSLFIRSVGSSLTYLL 68
           D   PN VC L+KS+YGLKQ  R WF  F+  L   GFV S  D + F++   +    +L
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281

Query: 69  LYVDDIIVIGPDYSYISFLKNQLALEFKISDLSPLK 105
           +YVDDII+   + + +  LK+QL   FK+ DL PLK
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317

The following BLAST results are available for this feature:

BLAST of Cmc11g0307911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061282.1	9.4e-44	88.46	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative m...	[more]
TYK00083.1	8.8e-42	85.58	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYJ97594.1	1.5e-41	85.58	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0056771.1	1.5e-41	85.58	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0057165.1	1.3e-40	84.62	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative m...	[more]

BLAST of Cmc11g0307911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	9.5e-23	51.52	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.0e-21	48.48	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.8e-13	37.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	8.4e-11	38.71	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	4.6e-09	32.00	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0307911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZE5	4.6e-44	88.46	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BJZ6	4.3e-42	85.58	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BEU0	7.3e-42	85.58	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7UTE5	7.3e-42	85.58	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DUH6	6.2e-41	84.62	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc11g0307911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.0e-15	43.75	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..104 e-value: 1.8E-23 score: 83.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..82
None	No IPR available	PANTHER	PTHR11439:SF331	SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0307911.1	Cmc11g0307911.1	mRNA