Cmc11g0307711 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307711
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 28938521 .. 28940391 (+)
RNA-Seq Expression	Cmc11g0307711
Synteny	Cmc11g0307711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTGCATGTTCGTTCAATTAAAAAAAAGGATAAACAAACTAACTAAAAAATATATAATAATAAATACAAAAATTAGATCTCAATTATAAATCTTTTAAAGTTAATTATCATAAGTCATAACCAAAAAAAAAAAAGAAAAAAAAAAGTACAATAGAAATCTCAAAATATTGCTCCCCAAAAAGGAAAAGATTATATACATATCCTCCATAGTACACAGCAAAATCCTAATTTCCACAAATTAAAAAAGAAAAATAACCCCTAAAAATTTAACTACTAATTTAAGTTTCATCTTCCCCAAATCAACCGGTTCTTTTCAGTAAATTTTCCGGTGAAAATTCCGAGCAAGATCTTTTCCTCTGTAACAAAGAGGAGCTAAATCCGAGCATAGAAGTTCCAATGTCAAAATCAAGAACGATATCCTCCATTTGATACCCTCCCAAAACGATGGCGTTTCTCGGCTTCAATCCACCATCAACAAACCCTAGACAATAAGCTTTATCGTTAACCTTCACCATTGAATTTCTTCCATAGATTTTCCATCCCACCATCTCGCTCTGTAAGATCAGTTCAATCTCCGGCACTTTCGGCCCTGCTGCTGTCATCTCCATGTTTTCCGATTCAAAACACGCCTCAAACGGCGCTACCGGCGCCACTTCTTTCATATTCATCGCTGCCGCTGCGGCCCTGAAAGCCACCGTCAAAGAGTTAAAGATTGAACTCTCTAAAGCAGTGTACGGAACTACCGTACTTAGTCTCGTCCCTCCTCCACCTCCGCCGTCGCCTGCTCCCTCTAAATCGAGCAACGACTTGTTCAAATCGAGGCGGTTACCGTCTACTTTAATGGCTTTTACATTAATAAAATACTCCGGCGACAGCAAGGCGTCGATTTTCTTAGTCAAAATCGGCGTGTAAGTCAAAGAACTCGAAATCTCAGATCCATAAACAGAGTCTGGACTTCCACTATCCGGAAAAACAACACCGTTCGTCGACGACAGACAAAGAGAAAACCGCCGGTGAGAACCAAGCTCCGTCGCGATCTGAGCCGGAAGCGAGATTTGATTCCGGCCAAGCCCTAAAACCCCTTTAACAGATTTCGCCAAACCTTGTAAAAGAAATCTCGGAGCACAAGAATGAAGAGCGACAATCACCGCTGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCCGAGCGATTACATTACACGCGCCACCAACAGACCCAGATCTGCCCCCAGCAGTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAAGGAAGAGAGAAGAAGAAGAAGGAAGGGAGAATGGGGAACAGCCATGGGAAATTTCTGGCACAGTCGGCGGAGGTTCGCCGCGGATTGGAAATAGGTTAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAAGACTTTGGAAGAGAAATTTTTTTTGGATAAGGGCCAGGTGGAGGAGTTTGTTTGAGAGAATATATTTATAAAATTTATGGATATAAATTTAATTTAACGAAGATGAAAAATGATGGGATGCTGAGGTGGAAATGAATGTGATATGGTTTTTATGTCTATCTATCTTCTTTCCCCAAATTTTAGGTGAACGGTTTTTAACATATCCATGTGTGCCAAATGTGACTTTCTTTTCTTTGT

mRNA sequence

TTATTGCATGTTCGTTCAATTAAAAAAAAGGATAAACAAACTAACTAAAAAATATATAATAATAAATACAAAAATTAGATCTCAATTATAAATCTTTTAAAGTTAATTATCATAAGTCATAACCAAAAAAAAAAAAGAAAAAAAAAAGTACAATAGAAATCTCAAAATATTGCTCCCCAAAAAGGAAAAGATTATATACATATCCTCCATAGTACACAGCAAAATCCTAATTTCCACAAATTAAAAAAGAAAAATAACCCCTAAAAATTTAACTACTAATTTAAGTTTCATCTTCCCCAAATCAACCGGTTCTTTTCAGTAAATTTTCCGGTGAAAATTCCGAGCAAGATCTTTTCCTCTGTAACAAAGAGGAGCTAAATCCGAGCATAGAAGTTCCAATGTCAAAATCAAGAACGATATCCTCCATTTGATACCCTCCCAAAACGATGGCGTTTCTCGGCTTCAATCCACCATCAACAAACCCTAGACAATAAGCTTTATCGTTAACCTTCACCATTGAATTTCTTCCATAGATTTTCCATCCCACCATCTCGCTCTGTAAGATCAGTTCAATCTCCGGCACTTTCGGCCCTGCTGCTGTCATCTCCATGTTTTCCGATTCAAAACACGCCTCAAACGGCGCTACCGGCGCCACTTCTTTCATATTCATCGCTGCCGCTGCGGCCCTGAAAGCCACCGTCAAAGAGTTAAAGATTGAACTCTCTAAAGCAGTGTACGGAACTACCGTACTTAGTCTCGTCCCTCCTCCACCTCCGCCGTCGCCTGCTCCCTCTAAATCGAGCAACGACTTGTTCAAATCGAGGCGGTTACCGTCTACTTTAATGGCTTTTACATTAATAAAATACTCCGGCGACAGCAAGGCGTCGATTTTCTTAGTCAAAATCGGCGTGTAAGTCAAAGAACTCGAAATCTCAGATCCATAAACAGAGTCTGGACTTCCACTATCCGGAAAAACAACACCGTTCGTCGACGACAGACAAAGAGAAAACCGCCGGTGAGAACCAAGCTCCGTCGCGATCTGAGCCGGAAGCGAGATTTGATTCCGGCCAAGCCCTAAAACCCCTTTAACAGATTTCGCCAAACCTTGTAAAAGAAATCTCGGAGCACAAGAATGAAGAGCGACAATCACCGCTGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCCGAGCGATTACATTACACGCGCCACCAACAGACCCAGATCTGCCCCCAGCAGTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAAGGAAGAGAGAAGAAGAAGAAGGAAGGGAGAATGGGGAACAGCCATGGGAAATTTCTGGCACAGTCGGCGGAGGTTCGCCGCGGATTGGAAATAGGTTAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAAGACTTTGGAAGAGAAATTTTTTTTGGATAAGGGCCAGGTGGAGGAGTTTGTTTGAGAGAATATATTTATAAAATTTATGGATATAAATTTAATTTAACGAAGATGAAAAATGATGGGATGCTGAGGTGGAAATGAATGTGATATGGTTTTTATGTCTATCTATCTTCTTTCCCCAAATTTTAGGTGAACGGTTTTTAACATATCCATGTGTGCCAAATGTGACTTTCTTTTCTTTGT

Coding sequence (CDS)

ATGAAGAGCGACAATCACCGCTGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCCGAGCGATTACATTACACGCGCCACCAACAGACCCAGATCTGCCCCCAGCAGTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

Protein sequence

MKSDNHRCRRPAQRPDGHRILNQNRLPFQIPKRIPSDYITRATNRPRSAPSSSRNTLNRATGNRTAGRRSTTSHPERPAAKIDSEMDGLNRRTMENSGQILIGEGIFSEGDDEREGLAMEEG

Homology

[Close]

BLAST of Cmc11g0307711 vs. ExPASy TrEMBL
Match: A0A0A0KFQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53
Identity = 112/122 (91.80%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MKSDNHRCRRPAQRPDGHRILNQNRLPFQIPKRIPSDYITRATNRPRSAPSSSRNTLNRA 60
           MKSDNHRCRRP QRPDGHRILNQNRLPFQIPK IPSDYITRATNRPRS P+SSRNTLNRA
Sbjct: 1   MKSDNHRCRRPVQRPDGHRILNQNRLPFQIPKGIPSDYITRATNRPRSTPTSSRNTLNRA 60

Query: 61  TGNRTAGRRSTTSHPERPAAKIDSEMDGLNRRTMENSGQILIGEGIFSEGDDEREGLAME 120
            GNRTAGRRSTTSHPER AAKI+ EMDGLNRR MENSG ILIGEGIFSEGDDEREGLAME
Sbjct: 61  AGNRTAGRRSTTSHPERLAAKINGEMDGLNRRAMENSGYILIGEGIFSEGDDEREGLAME 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

The following BLAST results are available for this feature:

BLAST of Cmc11g0307711 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307711 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ4	1.7e-53	91.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1	[more]

BLAST of Cmc11g0307711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0307711.1	Cmc11g0307711.1	mRNA