Cmc11g0307481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribosomal protein
Location	CMiso1.1chr11: 28811680 .. 28812881 (-)
RNA-Seq Expression	Cmc11g0307481
Synteny	Cmc11g0307481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGACTCAAGTTAGAAATTTTTTCTTAGCTCTATTGATTGTTATAAAAAATTTTCTCAGCTCTATTGGTTGTTTATAGTGGAGATGAAGTGAATGCATCTTTAACCTTTTACTTCATGATTTACTTTCTGTTTAATCTTAAGTTAGAATGTTTTAACTTTGTACTTCATTTTCTGCACACTTGCATTTTGAACTTTAATGTTTTTTCATTTTGTAGTTTGTACTAACGTTGACATTGAAATTATGATTACAGGAAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTTGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTTGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATGTAAGTCACGGGGCATACTTTTCCCTCCATGTTATTTTAGTTCGTCGCTTACTGTTTATGCAACAAACGTACTCCTAGGATCTTCTTTCATGACTTACACGATCTATAATGCTTCTCTATACTCAATGAAGCATTGCTCTTTCATCTAATAATAATACGATTTTCTTCTTCATCAGGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCATAGCCTAGATAACAGTTCTGTTTGTTCTTAAATCGAAGAAGTTGAGATAAGATTTCTATATTTATGATTGATGAAAAATTTTCCTGTTTGTTTCCTTTTAGCAAACCATTAGCTGCACAATCGTCAACACTTGTGATGGGAGTAATGTGTTTTTTGTTTCACTCTACATGTTCTGTAGATTTTTGTTTTAATTTATTGTTTGATTATTGTTTGGTTTCAATTAAAGAACATCTAATCAATTCGTGCAGGTGCTTCCAGTTATTCAAAATTAATGTTATGAAAATTTTTAAATCGAACATGGGATTAGGGATTTAGATCTACTGAACTTTGAATCGTATTTCGTGTAGAACTTGTGGTTCTCATGAAGGATTATGATTCCTAACTTGAATTAGAATGGACCTGTGTATGTTTTTCAAATTGAAGTTTCAGTTGCTTCTAAGCAAATTTGAAATTTCTGTTGCTTCTAACCACATTTGTTGCTTGCAAGTATCGAATCAATCAATT

mRNA sequence

GTGACTCAAGAAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTTGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTTGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCATAGCCTAGATAACAGTTCTGTTTGTTCTTAAATCGAAGAAGTTGAGATAAGATTTCTATATTTATGATTGATGAAAAATTTTCCTGTTTGTTTCCTTTTAGCAAACCATTAGCTGCACAATCGTCAACACTTGTGATGGGAGTAATGTGTTTTTTGTTTCACTCTACATGTTCTGTAGATTTTTGTTTTAATTTATTGTTTGATTATTGTTTGGTTTCAATTAAAGAACATCTAATCAATTCGTGCAGGTGCTTCCAGTTATTCAAAATTAATGTTATGAAAATTTTTAAATCGAACATGGGATTAGGGATTTAGATCTACTGAACTTTGAATCGTATTTCGTGTAGAACTTGTGGTTCTCATGAAGGATTATGATTCCTAACTTGAATTAGAATGGACCTGTGTATGTTTTTCAAATTGAAGTTTCAGTTGCTTCTAAGCAAATTTGAAATTTCTGTTGCTTCTAACCACATTTGTTGCTTGCAAGTATCGAATCAATCAATT

Coding sequence (CDS)

ATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTTGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGA

Protein sequence

MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

[Close]

BLAST of Cmc11g0307481 vs. NCBI nr
Match: KAA0033405.1 (60S ribosomal protein L10a [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 190 MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 249

Query: 61  YRVF 65
           YRVF
Sbjct: 250 YRVF 253

[Close]

BLAST of Cmc11g0307481 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. NCBI nr
Match: XP_022958674.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023532799.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.7 bits (317), Expect = 7.1e-26
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. NCBI nr
Match: KAG7010351.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.7 bits (317), Expect = 7.1e-26
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 283 MVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 342

Query: 61  YRVF 65
           YRVF
Sbjct: 343 YRVF 346

[Close]

BLAST of Cmc11g0307481 vs. NCBI nr
Match: XP_022153072.1 (60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S ribosomal protein L10a-like [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 7.1e-26
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-25
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQ 213

Query: 62  RVF 65
           R+F
Sbjct: 214 RIF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-25
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 155 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 214

Query: 62  RVF 65
           RVF
Sbjct: 215 RVF 217

[Close]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-25
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQ 213

Query: 62  RVF 65
           R+F
Sbjct: 214 RIF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 8.2e-25
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPI 213

Query: 62  RVF 65
           RVF
Sbjct: 214 RVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 8.2e-25
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPI 213

Query: 62  RVF 65
           RVF
Sbjct: 214 RVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL
Match: A0A5A7SW61 (60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00570 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 190 MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 249

Query: 61  YRVF 65
           YRVF
Sbjct: 250 YRVF 253

[Close]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL
Match: A0A6J1DHY4 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 60
           MVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA
Sbjct: 153 MVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKA 212

Query: 61  YRVF 65
           YRVF
Sbjct: 213 YRVF 216

[Close]

BLAST of Cmc11g0307481 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-26
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQ 213

Query: 62  RVF 65
           R+F
Sbjct: 214 RIF 216

[Close]

BLAST of Cmc11g0307481 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-26
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 155 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 214

Query: 62  RVF 65
           RVF
Sbjct: 215 RVF 217

[Close]

BLAST of Cmc11g0307481 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-26
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 155 VKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPN 214

Query: 62  RVF 65
           RVF
Sbjct: 215 RVF 217

[Close]

BLAST of Cmc11g0307481 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 114.8 bits (286), Expect = 2.6e-26
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQ 213

Query: 62  RVF 65
           R+F
Sbjct: 214 RIF 216

[Close]

BLAST of Cmc11g0307481 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 114.8 bits (286), Expect = 2.6e-26
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2   VKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAY 61
           VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   
Sbjct: 154 VKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQ 213

Query: 62  RVF 65
           R+F
Sbjct: 214 RIF 216

The following BLAST results are available for this feature:

BLAST of Cmc11g0307481 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033405.1	5.4e-26	100.00	60S ribosomal protein L10a [Cucumis melo var. makuwa]	[more]
XP_008458587.1	5.4e-26	100.00	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom...	[more]
XP_022958674.1	7.1e-26	98.44	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosom...	[more]
KAG7010351.1	7.1e-26	98.44	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022153072.1	7.1e-26	98.44	60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S riboso...	[more]

BLAST of Cmc11g0307481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZB9	2.2e-25	88.89	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	2.2e-25	90.48	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
P59230	3.7e-25	88.89	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]
B8B9K6	8.2e-25	87.30	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	8.2e-25	87.30	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]

BLAST of Cmc11g0307481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SW61	2.6e-26	100.00	60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KEW8	2.6e-26	100.00	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]
A0A1S3C7Q8	2.6e-26	100.00	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1	[more]
A0A6J1JCI3	3.4e-26	98.44	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]
A0A6J1DHY4	3.4e-26	98.44	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1	[more]

BLAST of Cmc11g0307481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	1.5e-26	88.89	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	1.5e-26	90.48	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.5e-26	90.48	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	2.6e-26	88.89	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	2.6e-26	88.89	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 2..58 e-value: 1.1E-13 score: 51.4
None	No IPR available	GENE3D	3.30.190.20		coord: 1..62 e-value: 2.2E-20 score: 74.9
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 1..62
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 1..62
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 2..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0307481.1	Cmc11g0307481.1	mRNA