Cmc11g0307311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	CMiso1.1chr11: 28710979 .. 28711641 (-)
RNA-Seq Expression	Cmc11g0307311
Synteny	Cmc11g0307311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAATTGGTGGAAGAAATGCTAGCTTCGGGAATAATACGACCAAGCAAAAGCCTTTATTCTAGCCCAGTGTTACTTGTAAAAAAAAAAGACGGAAGCTGGAGATTTTGTGTAGACTATCGGGCAGTCAATAATGCAACTATTCCGGATAAGTTTCAAATACCGGTGGTGGAAGAATTATTTGATGAGTTGAATGGGGCCTCCTTGTTCTCAAAAATTGATCTCAAATCCGGTTATCATCAAATAAGAATGGAAGAAAAGGATATTCCGAAAACAACCTTCCGAACACATGAAGGACATTATGAGTTCCTTGTCATGCCCTTCGGGTTGACTAATGCTCCGACTACCTTTCAAGCCTTAATGAATAATGTATTCAAGCCTTATTTGCGGAAGTTCGGTCTAGTATTCTTTGACGACATTTTGGTCTATAGTAAGAATGAGGAGGAACATAAGAATCATTTGGGAATAGTTCTCTCAGCCTTGAGAGAATATTTGTTATACGCCAATAAAAAGAAGTGCAGTTTTGCCCAACCAAAAATCGAATATTTGGGACAAATAATATCGGGAGAAGGTGTTGAGGTAGATCCAGAGAAAATACGTTCAATTGCTGACTGGCTGACACCGAAAACTGTTAGAGAAGTCAGGGGGTTCTTGGCCTAA

mRNA sequence

ATGGAAAAATTGGTGGAAGAAATGCTAGCTTCGGGAATAATACGACCAAGCAAAAGCCTTTATTCTAGCCCAGTGTTACTTGTAAAAAAAAAAGACGGAAGCTGGAGATTTTGTGTAGACTATCGGGCAGTCAATAATGCAACTATTCCGGATAAGTTTCAAATACCGGTGGTGGAAGAATTATTTGATGAGTTGAATGGGGCCTCCTTGTTCTCAAAAATTGATCTCAAATCCGGTTATCATCAAATAAGAATGGAAGAAAAGGATATTCCGAAAACAACCTTCCGAACACATGAAGGACATTATGAGTTCCTTGTCATGCCCTTCGGGTTGACTAATGCTCCGACTACCTTTCAAGCCTTAATGAATAATGTATTCAAGCCTTATTTGCGGAAGTTCGGTCTAGTATTCTTTGACGACATTTTGGTCTATAGTAAGAATGAGGAGGAACATAAGAATCATTTGGGAATAGTTCTCTCAGCCTTGAGAGAATATTTGTTATACGCCAATAAAAAGAAGTGCAGTTTTGCCCAACCAAAAATCGAATATTTGGGACAAATAATATCGGGAGAAGGTGTTGAGGTAGATCCAGAGAAAATACGTTCAATTGCTGACTGGCTGACACCGAAAACTGTTAGAGAAGTCAGGGGGTTCTTGGCCTAA

Coding sequence (CDS)

ATGGAAAAATTGGTGGAAGAAATGCTAGCTTCGGGAATAATACGACCAAGCAAAAGCCTTTATTCTAGCCCAGTGTTACTTGTAAAAAAAAAAGACGGAAGCTGGAGATTTTGTGTAGACTATCGGGCAGTCAATAATGCAACTATTCCGGATAAGTTTCAAATACCGGTGGTGGAAGAATTATTTGATGAGTTGAATGGGGCCTCCTTGTTCTCAAAAATTGATCTCAAATCCGGTTATCATCAAATAAGAATGGAAGAAAAGGATATTCCGAAAACAACCTTCCGAACACATGAAGGACATTATGAGTTCCTTGTCATGCCCTTCGGGTTGACTAATGCTCCGACTACCTTTCAAGCCTTAATGAATAATGTATTCAAGCCTTATTTGCGGAAGTTCGGTCTAGTATTCTTTGACGACATTTTGGTCTATAGTAAGAATGAGGAGGAACATAAGAATCATTTGGGAATAGTTCTCTCAGCCTTGAGAGAATATTTGTTATACGCCAATAAAAAGAAGTGCAGTTTTGCCCAACCAAAAATCGAATATTTGGGACAAATAATATCGGGAGAAGGTGTTGAGGTAGATCCAGAGAAAATACGTTCAATTGCTGACTGGCTGACACCGAAAACTGTTAGAGAAGTCAGGGGGTTCTTGGCCTAA

Protein sequence

MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEELFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQALMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPKIEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA

Homology

[Close]

BLAST of Cmc11g0307311 vs. NCBI nr
Match: KAA0033393.1 (peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE
Sbjct: 497 MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 556

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA
Sbjct: 557 LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 616

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK
Sbjct: 617 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 676

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA 221
           IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA
Sbjct: 677 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA 716

[Close]

BLAST of Cmc11g0307311 vs. NCBI nr
Match: TYJ98385.1 (retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa])

HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111
Identity = 201/219 (91.78%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SGIIRPSKS YSSPVLLVKKKDGSWRFCV YRAVNNATIPDKF IPVVEE
Sbjct: 391 MEKLVEEMLTSGIIRPSKSPYSSPVLLVKKKDGSWRFCVYYRAVNNATIPDKFPIPVVEE 450

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKD+ KTTFRTHEGHYEFLVMPFGLTNAP TFQA
Sbjct: 451 LFDELNGASLFSKIDLKSGYHQIRMEEKDVLKTTFRTHEGHYEFLVMPFGLTNAPVTFQA 510

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+YSKNE+EHK+HLGIVLS LREY LYANKKKCSFAQP+
Sbjct: 511 LMNNVFKPYLRKFVLVFFDDILIYSKNEKEHKSHLGIVLSTLREYSLYANKKKCSFAQPR 570

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISGEGVEVDPEKIRSIADW  PKTV+EVRGFL
Sbjct: 571 IEYLGHIISGEGVEVDPEKIRSIADWPIPKTVKEVRGFL 609

[Close]

BLAST of Cmc11g0307311 vs. NCBI nr
Match: KAA0032313.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYJ99432.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 199/219 (90.87%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SGIIRPSKS YSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKF IPVVEE
Sbjct: 111 MEKLVEEMLTSGIIRPSKSPYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 170

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKT FRTH G+YEFLVMPFGLTNAP TFQ 
Sbjct: 171 LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTAFRTHGGYYEFLVMPFGLTNAPATFQP 230

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+YSKNEEEHK+HLGIVLSALREY LYANKKKCSFAQP+
Sbjct: 231 LMNNVFKPYLRKFVLVFFDDILIYSKNEEEHKSHLGIVLSALREYSLYANKKKCSFAQPR 290

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISGEG+EVDPEKI SIADW  PKTV+EV+GFL
Sbjct: 291 IEYLGHIISGEGIEVDPEKICSIADWPIPKTVKEVKGFL 329

[Close]

BLAST of Cmc11g0307311 vs. NCBI nr
Match: KAA0033505.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK26821.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SG+IRPSKS YS+PVLLVKKKDGSWRFCVDYRAVNNATIPDKF IPVVEE
Sbjct: 253 MEKLVEEMLTSGVIRPSKSPYSNPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 312

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGA+LFSKIDLKSGYHQIRMEEKDIPKT FRTHEGHYEFLVMPFGLTN P TFQA
Sbjct: 313 LFDELNGATLFSKIDLKSGYHQIRMEEKDIPKTAFRTHEGHYEFLVMPFGLTNVPDTFQA 372

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+Y+KNEEEH +HLGIV SALRE+ LYAN+KKCSFAQ +
Sbjct: 373 LMNNVFKPYLRKFVLVFFDDILIYNKNEEEHMSHLGIVFSALREHTLYANRKKCSFAQSR 432

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISG GVEVDPEKIRSIA+W  P+  RE+ GFL
Sbjct: 433 IEYLGHIISGGGVEVDPEKIRSIANWPVPENAREIWGFL 471

[Close]

BLAST of Cmc11g0307311 vs. NCBI nr
Match: KAA0040958.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK20299.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 392.1 bits (1006), Expect = 3.1e-105
Identity = 191/219 (87.21%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SG+IRP KS YSSPVLLVKKKDGSWRFCVDYRAVNNAT+PDKF I VVEE
Sbjct: 427 MEKLVEEMLTSGVIRPRKSPYSSPVLLVKKKDGSWRFCVDYRAVNNATVPDKFPISVVEE 486

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSK DLKSGYHQIRMEEKDIPKT FRTHEGHY+FLVMPFGLTNAP TFQA
Sbjct: 487 LFDELNGASLFSKNDLKSGYHQIRMEEKDIPKTAFRTHEGHYKFLVMPFGLTNAPATFQA 546

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVF+PYLRKF LVFFDDILVYSKNEEEH NHLG +LS LRE+ LYANKKKCSFAQ K
Sbjct: 547 LMNNVFRPYLRKFVLVFFDDILVYSKNEEEHMNHLGKILSTLREHTLYANKKKCSFAQSK 606

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISG GVEVDPEKIRSIADW  P  VRE+ GFL
Sbjct: 607 IEYLGHIISGGGVEVDPEKIRSIADWPIPTNVREIWGFL 645

[Close]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 102/219 (46.58%), Postives = 139/219 (63.47%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           + K+V+++L +  I PSKS  SSPV+LV KKDG++R CVDYR +N ATI D F +P ++ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           L   +  A +F+ +DL SGYHQI ME KD  KT F T  G YE+ VMPFGL NAP+TF  
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 731

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
            M + F+    +F  V+ DDIL++S++ EEH  HL  VL  L+   L   KKKC FA  +
Sbjct: 732 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 791

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
            E+LG  I  + +     K  +I D+ TPKTV++ + FL
Sbjct: 792 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFL 828

[Close]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 102/219 (46.58%), Postives = 139/219 (63.47%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           + K+V+++L +  I PSKS  SSPV+LV KKDG++R CVDYR +N ATI D F +P ++ 
Sbjct: 638 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 697

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           L   +  A +F+ +DL SGYHQI ME KD  KT F T  G YE+ VMPFGL NAP+TF  
Sbjct: 698 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 757

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
            M + F+    +F  V+ DDIL++S++ EEH  HL  VL  L+   L   KKKC FA  +
Sbjct: 758 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 817

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
            E+LG  I  + +     K  +I D+ TPKTV++ + FL
Sbjct: 818 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFL 854

[Close]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.3e-49
Identity = 90/224 (40.18%), Postives = 147/224 (65.62%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKK-----DGSWRFCVDYRAVNNATIPDKFQI 60
           +E+ ++E+L  GIIRPS S Y+SP+ +V KK     +  +R  VD++ +N  TIPD + I
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVVEELFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAP 120
           P +      L  A  F+ +DL SG+HQI M+E DIPKT F T  G YEFL +PFGL NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 121 TTFQALMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCS 180
             FQ +++++ + ++ K   V+ DDI+V+S++ + H  +L +VL++L +  L  N +K  
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 181 FAQPKIEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           F   ++E+LG I++ +G++ DP+K+R+I++   P +V+E++ FL
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFL 362

[Close]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.6e-49
Identity = 93/224 (41.52%), Postives = 138/224 (61.61%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKD-----GSWRFCVDYRAVNNATIPDKFQI 60
           +E  V+EML  G+IR S S Y+SP  +V KK        +R  +DYR +N  TIPD++ I
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVVEELFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAP 120
           P ++E+  +L     F+ IDL  G+HQI M+E+ I KT F T  GHYE+L MPFGL NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 121 TTFQALMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCS 180
            TFQ  MNN+ +P L K  LV+ DDI+++S +  EH N + +V + L +  L     KC 
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 181 FAQPKIEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           F + +  +LG I++ +G++ +P K+++I  +  P   +E+R FL
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

[Close]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.0e-47
Identity = 91/224 (40.62%), Postives = 140/224 (62.50%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLV-KKKDGS----WRFCVDYRAVNNATIPDKFQI 60
           +E  +++ML  GIIR S S Y+SP+ +V KK+D S    +R  +DYR +N  T+ D+  I
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVVEELFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAP 120
           P ++E+  +L   + F+ IDL  G+HQI M+ + + KT F T  GHYE+L MPFGL NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 121 TTFQALMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCS 180
            TFQ  MN++ +P L K  LV+ DDI+V+S + +EH   LG+V   L +  L     KC 
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 181 FAQPKIEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           F + +  +LG +++ +G++ +PEKI +I  +  P   +E++ FL
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFL 446

[Close]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL
Match: A0A5A7SSG3 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00430 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.1e-123
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE
Sbjct: 497 MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 556

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA
Sbjct: 557 LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 616

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK
Sbjct: 617 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 676

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA 221
           IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA
Sbjct: 677 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFLA 716

[Close]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL
Match: A0A5D3BJ44 (Retrotransposon protein, putative, unclassified OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001280 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 201/219 (91.78%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SGIIRPSKS YSSPVLLVKKKDGSWRFCV YRAVNNATIPDKF IPVVEE
Sbjct: 391 MEKLVEEMLTSGIIRPSKSPYSSPVLLVKKKDGSWRFCVYYRAVNNATIPDKFPIPVVEE 450

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKD+ KTTFRTHEGHYEFLVMPFGLTNAP TFQA
Sbjct: 451 LFDELNGASLFSKIDLKSGYHQIRMEEKDVLKTTFRTHEGHYEFLVMPFGLTNAPVTFQA 510

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+YSKNE+EHK+HLGIVLS LREY LYANKKKCSFAQP+
Sbjct: 511 LMNNVFKPYLRKFVLVFFDDILIYSKNEKEHKSHLGIVLSTLREYSLYANKKKCSFAQPR 570

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISGEGVEVDPEKIRSIADW  PKTV+EVRGFL
Sbjct: 571 IEYLGHIISGEGVEVDPEKIRSIADWPIPKTVKEVRGFL 609

[Close]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL
Match: A0A5A7SPK3 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold316G00210 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 199/219 (90.87%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SGIIRPSKS YSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKF IPVVEE
Sbjct: 111 MEKLVEEMLTSGIIRPSKSPYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 170

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKT FRTH G+YEFLVMPFGLTNAP TFQ 
Sbjct: 171 LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTAFRTHGGYYEFLVMPFGLTNAPATFQP 230

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+YSKNEEEHK+HLGIVLSALREY LYANKKKCSFAQP+
Sbjct: 231 LMNNVFKPYLRKFVLVFFDDILIYSKNEEEHKSHLGIVLSALREYSLYANKKKCSFAQPR 290

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISGEG+EVDPEKI SIADW  PKTV+EV+GFL
Sbjct: 291 IEYLGHIISGEGIEVDPEKICSIADWPIPKTVKEVKGFL 329

[Close]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL
Match: A0A5D3DST3 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00090 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SG+IRPSKS YS+PVLLVKKKDGSWRFCVDYRAVNNATIPDKF IPVVEE
Sbjct: 253 MEKLVEEMLTSGVIRPSKSPYSNPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 312

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGA+LFSKIDLKSGYHQIRMEEKDIPKT FRTHEGHYEFLVMPFGLTN P TFQA
Sbjct: 313 LFDELNGATLFSKIDLKSGYHQIRMEEKDIPKTAFRTHEGHYEFLVMPFGLTNVPDTFQA 372

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVFKPYLRKF LVFFDDIL+Y+KNEEEH +HLGIV SALRE+ LYAN+KKCSFAQ +
Sbjct: 373 LMNNVFKPYLRKFVLVFFDDILIYNKNEEEHMSHLGIVFSALREHTLYANRKKCSFAQSR 432

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISG GVEVDPEKIRSIA+W  P+  RE+ GFL
Sbjct: 433 IEYLGHIISGGGVEVDPEKIRSIANWPVPENAREIWGFL 471

[Close]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL
Match: A0A5D3D9X2 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00270 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 191/219 (87.21%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MEKLVEEMLASGIIRPSKSLYSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFQIPVVEE 60
           MEKLVEEML SG+IRP KS YSSPVLLVKKKDGSWRFCVDYRAVNNAT+PDKF I VVEE
Sbjct: 427 MEKLVEEMLTSGVIRPRKSPYSSPVLLVKKKDGSWRFCVDYRAVNNATVPDKFPISVVEE 486

Query: 61  LFDELNGASLFSKIDLKSGYHQIRMEEKDIPKTTFRTHEGHYEFLVMPFGLTNAPTTFQA 120
           LFDELNGASLFSK DLKSGYHQIRMEEKDIPKT FRTHEGHY+FLVMPFGLTNAP TFQA
Sbjct: 487 LFDELNGASLFSKNDLKSGYHQIRMEEKDIPKTAFRTHEGHYKFLVMPFGLTNAPATFQA 546

Query: 121 LMNNVFKPYLRKFGLVFFDDILVYSKNEEEHKNHLGIVLSALREYLLYANKKKCSFAQPK 180
           LMNNVF+PYLRKF LVFFDDILVYSKNEEEH NHLG +LS LRE+ LYANKKKCSFAQ K
Sbjct: 547 LMNNVFRPYLRKFVLVFFDDILVYSKNEEEHMNHLGKILSTLREHTLYANKKKCSFAQSK 606

Query: 181 IEYLGQIISGEGVEVDPEKIRSIADWLTPKTVREVRGFL 220
           IEYLG IISG GVEVDPEKIRSIADW  P  VRE+ GFL
Sbjct: 607 IEYLGHIISGGGVEVDPEKIRSIADWPIPTNVREIWGFL 645

[Close]

BLAST of Cmc11g0307311 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 153 NHLGIVLSALREYLLYANKKKCSFAQPKIEYLG--QIISGEGVEVDPEKIRSIADWLTPK 212
           NHLG+VL    ++  YAN+KKC+F QP+I YLG   IISGEGV  DP K+ ++  W  PK
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61

Query: 213 TVREVRGFL 220
              E+RGFL
Sbjct: 62  NTTELRGFL 70

[Close]

BLAST of Cmc11g0307311 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 7  EMLASGIIRPSKSLYSSPVLLVKKKDGSW 36
          EML + II+PS S YSSPVLLV+KKDG W
Sbjct: 51 EMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0307311 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033393.1	1.3e-122	100.00	peroxidase 64 [Cucumis melo var. makuwa]	[more]
TYJ98385.1	3.8e-111	91.78	retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]	[more]
KAA0032313.1	2.5e-110	90.87	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYJ99432.1 Tran...	[more]
KAA0033505.1	1.1e-105	86.30	peroxidase 64 [Cucumis melo var. makuwa] >TYK26821.1 peroxidase 64 [Cucumis melo...	[more]
KAA0040958.1	3.1e-105	87.21	peroxidase 64 [Cucumis melo var. makuwa] >TYK20299.1 peroxidase 64 [Cucumis melo...	[more]

BLAST of Cmc11g0307311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.7e-50	46.58	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.7e-50	46.58	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	4.3e-49	40.18	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P20825	5.6e-49	41.52	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	4.0e-47	40.63	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]

BLAST of Cmc11g0307311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSG3	6.1e-123	100.00	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00430 ...	[more]
A0A5D3BJ44	1.8e-111	91.78	Retrotransposon protein, putative, unclassified OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7SPK3	1.2e-110	90.87	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DST3	5.2e-106	86.30	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00090 ...	[more]
A0A5D3D9X2	1.5e-105	87.21	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00270 ...	[more]

BLAST of Cmc11g0307311 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.1e-15	53.62	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	1.5e-04	72.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 28..188 e-value: 5.8E-32 score: 111.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 9..188 score: 18.05917
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..113 e-value: 8.1E-82 score: 275.6
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 8..219
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..219
None	No IPR available	CDD	cd01647	RT_LTR	coord: 12..188 e-value: 3.24623E-96 score: 276.399
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 53..188 e-value: 8.1E-82 score: 275.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0307311.1	Cmc11g0307311.1	mRNA