Cmc11g0307221 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307221
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	cytochrome-c oxidases;electron carriers
Location	CMiso1.1chr11: 28651230 .. 28653213 (-)
RNA-Seq Expression	Cmc11g0307221
Synteny	Cmc11g0307221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTATTTCTATGGGCTTTCTACACAGGTCTATCAAATTGGGCCGATTTGTCAATCCAACAAGTGAATATCAAGCCGATTAGAGGAGTAGGAAAAATGAAAAATAAAGAAATAGGCCGATACAGTGTTCTTACTTCTTCCCCTCCGCATCGCAAAGGAAGTCATCGTCTATTATTCGCCCCCATCAGCGGCAGCCTTCGGAACAACGATTTCTCGCTCTCCTCAGACCTTCTAATTCACGTTAGTTTCAATCTCTTTTCCTATTTCTTCTTTTGGATTATGATTTCATGGATCTTCTTTCGTAATCTGATCTTGGATGTTAGCGTAATGTTCGAACCATTTTATATTTTTTCTGGTTAATCTACTTCACGATTGTTGTTGCTTTTTATGTATTTCTTCTTGCAATTTTCGGGGATTTGGATTTACATGCTGTTTTACTATTGGATTGGAATACACTATTAACTTCCATCATTTACTCATTGAATAATTATCTTGAGATATTGGTAAGGAAAAAGGAGAAAGGTTATTTTCTTGTAATTTTAATATCTATTCTTAATTTCTTGCCTATTTTGTGGAAATGGGTCTTACTTCGTTCAGCAGCAGCTGAATTGATAATGATCGTTTTTGTCCTTAAGAGCTAGGGCCAGCCTAGCTGAAACAACTGGGGATTAGGGTGAAGTTTTCCTGACCCATAATCACATATGAGATTTATTAAATTGGTGAATCAGATGTACGAGTGAGAATGGGCTCTTGAAAGTGAAGAATTGTGCACGGGAGGTGCATTATAGCTTTTTTTTTTTTGGTTGCCTATTGGTGTTCTTCTCTTGTAATTACCTTTAGATGCTTTGGGGTTCTCTTCTGATTTCATTTATCAATAAGTATTTCTTTCACTAAAGAAATAATGAAGAATTCTGCACGAGATGTTCATTATATCTATGGATCTTCTGGGACTGGGACCAATCAATAGTGGCTCCTGAAGTAATCCTCACCAAAAATTGCGAAATGAATGTAATCTTACCGATGGGGATCTCATTCTTTAGAGATGGCTGATGATCGAGTATTTATATTCTTTTGCTTTCTAGAGTTGTATTAAATTTATAGTCAGTAGGCAATTTATCATGTATTTTAGATTTAGTAATGTCGGAAACTTTCCAAAGTCCTTTGATTTCCTGTTTGTTGTATAGAAGAAATCAGATCTGTAAGCACACACTTGCAAATTCACCTGTTTTCTATACGAGGATGAATTTGGAGTTGGAAGTAGCTTTAATGAAATTTTATTAATTTACTATTTAAATTATTTTGCAGGATGACTGAAGCCATTGAGCAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATTCATAAGCACACATATCTCAAAGGCCCATTGGATAAGGTCACTTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCGTTGTATCTTATTGTAAGTTTACCACTCTTTAATGCAGTTTAAGCTTTTCTCCTGCATTTTGAAGAATGTGATATTACTTGTACAGTATTCGTCATTACTTATAATGTCGGTCTTATTCCTGTTTCATGCAGGGACGGGGGATCTATAACATGTCACATGGAATTGGGAAGAAAGAATGAGGTCATAGTCTCTTTGCATGTTAATTTCGAAGAGTTTTATGCTCTGGATCCATGTTAATTTTGTTATTGAAGTAATCTCTGCCTAATAATTGCTTAGTTGCAGACTCGACTACCAATTGATTTGAATATCATTTTCAGATTCTTTGTTGTGTGTATTGGAAATGTTTGTCTCAGATTATTGTTTTTCTCCTTTTTTGAGAAATTGTCTGGTTGAGTTTGGTTTCCTAAGATTCTTAAAGTTGTGACGCCAATGTATATTGAGATTCTGGAAGCCCCGTGGTCGTGAAATAAGAAAGTGAGGATTAGCAACATACCCAGAATAGTTGTTTCTTTTTCCTTTATAGTTT

mRNA sequence

GGGTATTTCTATGGGCTTTCTACACAGGTCTATCAAATTGGGCCGATTTGTCAATCCAACAAGTGAATATCAAGCCGATTAGAGGAGTAGGAAAAATGAAAAATAAAGAAATAGGCCGATACAGTGTTCTTACTTCTTCCCCTCCGCATCGCAAAGGAAGTCATCGTCTATTATTCGCCCCCATCAGCGGCAGCCTTCGGAACAACGATTTCTCGCTCTCCTCAGACCTTCTAATTCACGATGACTGAAGCCATTGAGCAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATTCATAAGCACACATATCTCAAAGGCCCATTGGATAAGGTCACTTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCGTTGTATCTTATTGGACGGGGGATCTATAACATGTCACATGGAATTGGGAAGAAAGAATGAGGTCATAGTCTCTTTGCATGTTAATTTCGAAGAGTTTTATGCTCTGGATCCATGTTAATTTTGTTATTGAAGTAATCTCTGCCTAATAATTGCTTAGTTGCAGACTCGACTACCAATTGATTTGAATATCATTTTCAGATTCTTTGTTGTGTGTATTGGAAATGTTTGTCTCAGATTATTGTTTTTCTCCTTTTTTGAGAAATTGTCTGGTTGAGTTTGGTTTCCTAAGATTCTTAAAGTTGTGACGCCAATGTATATTGAGATTCTGGAAGCCCCGTGGTCGTGAAATAAGAAAGTGAGGATTAGCAACATACCCAGAATAGTTGTTTCTTTTTCCTTTATAGTTT

Coding sequence (CDS)

ATGACTGAAGCCATTGAGCAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATTCATAAGCACACATATCTCAAAGGCCCATTGGATAAGGTCACTTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCGTTGTATCTTATTGGACGGGGGATCTATAACATGTCACATGGAATTGGGAAGAAAGAATGA

Protein sequence

MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

Homology

[Close]

BLAST of Cmc11g0307221 vs. NCBI nr
Match: KAA0033384.1 (Histidine-containing phosphotransfer protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 142.1 bits (357), Expect = 1.8e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
          MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY
Sbjct: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60

Query: 61 NMSHGIGKKE 71
          NMSHGIGKKE
Sbjct: 61 NMSHGIGKKE 70

[Close]

BLAST of Cmc11g0307221 vs. NCBI nr
Match: KAE8646907.1 (hypothetical protein Csa_021033 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1   MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
           MTEAIEQPFRPREKLIERQK FQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY
Sbjct: 138 MTEAIEQPFRPREKLIERQKLFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 197

Query: 61  NMSHGIGKKE 71
           NMSHGIGKKE
Sbjct: 198 NMSHGIGKKE 207

[Close]

BLAST of Cmc11g0307221 vs. NCBI nr
Match: XP_038900908.1 (uncharacterized protein LOC120087955 [Benincasa hispida])

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
          MTE  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY
Sbjct: 1  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60

Query: 61 NMSHGIGKKE 71
          NMSHGIGKKE
Sbjct: 61 NMSHGIGKKE 70

[Close]

BLAST of Cmc11g0307221 vs. NCBI nr
Match: XP_038900874.1 (uncharacterized protein LOC120087933 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
          MTE +EQPFRPREKLIE+QKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIY
Sbjct: 1  MTE-VEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIY 60

Query: 61 NMSHGIGKKE 71
          NMSHGIGKKE
Sbjct: 61 NMSHGIGKKE 69

[Close]

BLAST of Cmc11g0307221 vs. NCBI nr
Match: XP_022957674.1 (uncharacterized protein LOC111459140 isoform X1 [Cucurbita moschata] >XP_022996284.1 uncharacterized protein LOC111491558 isoform X1 [Cucurbita maxima])

HSP 1 Score: 131.7 bits (330), Expect = 2.4e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHG 65
          EQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHG
Sbjct: 5  EQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHG 64

Query: 66 IGKKE 71
          IGKKE
Sbjct: 65 IGKKE 69

[Close]

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL
Match: A0A5A7SQB1 (Histidine-containing phosphotransfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00340 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.7e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
          MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY
Sbjct: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60

Query: 61 NMSHGIGKKE 71
          NMSHGIGKKE
Sbjct: 61 NMSHGIGKKE 70

[Close]

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL
Match: A0A0A0KBQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151650 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.3e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MTEAIEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60
          MTEAIEQPFRPREKLIERQK FQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY
Sbjct: 1  MTEAIEQPFRPREKLIERQKLFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIY 60

Query: 61 NMSHGIGKKE 71
          NMSHGIGKKE
Sbjct: 61 NMSHGIGKKE 70

[Close]

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL
Match: A0A6J1K6C6 (uncharacterized protein LOC111491558 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHG 65
          EQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHG
Sbjct: 3  EQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHG 62

Query: 66 IGKKE 71
          IGKKE
Sbjct: 63 IGKKE 67

[Close]

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL
Match: A0A6J1K8A8 (uncharacterized protein LOC111491558 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491558 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHG 65
          EQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHG
Sbjct: 5  EQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHG 64

Query: 66 IGKKE 71
          IGKKE
Sbjct: 65 IGKKE 69

[Close]

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL
Match: A0A6J1H2N1 (uncharacterized protein LOC111459140 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459140 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHG 65
          EQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHG
Sbjct: 5  EQPFRPREKLIERQKYFQSIHKHTYLKGPMDKITSVAIPIALAASSLYLIGRGIYNMSHG 64

Query: 66 IGKKE 71
          IGKKE
Sbjct: 65 IGKKE 69

[Close]

BLAST of Cmc11g0307221 vs. TAIR 10
Match: AT4G21105.1 (cytochrome-c oxidases;electron carriers )

HSP 1 Score: 113.2 bits (282), Expect = 8.3e-26
Identity = 53/65 (81.54%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHG 65
          E PFRPREKL+E+Q+ FQSI +HTYLKGP+DK+TSVAIPIALAASSLY+IG GIYNMS+G
Sbjct: 4  ETPFRPREKLLEKQRLFQSIQRHTYLKGPMDKITSVAIPIALAASSLYMIGTGIYNMSNG 63

Query: 66 IGKKE 71
          IGKKE
Sbjct: 64 IGKKE 68

[Close]

BLAST of Cmc11g0307221 vs. TAIR 10
Match: AT4G21105.2 (cytochrome-c oxidases;electron carriers )

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 6  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIP 45
          E PFRPREKL+E+Q+ FQSI +HTYLKGP+DK+TS+ IP
Sbjct: 4  ETPFRPREKLLEKQRLFQSIQRHTYLKGPMDKITSLFIP 42

The following BLAST results are available for this feature:

BLAST of Cmc11g0307221 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033384.1	1.8e-30	100.00	Histidine-containing phosphotransfer protein 1 [Cucumis melo var. makuwa]	[more]
KAE8646907.1	1.5e-29	98.57	hypothetical protein Csa_021033 [Cucumis sativus]	[more]
XP_038900908.1	2.0e-29	97.14	uncharacterized protein LOC120087955 [Benincasa hispida]	[more]
XP_038900874.1	1.1e-27	92.86	uncharacterized protein LOC120087933 [Benincasa hispida]	[more]
XP_022957674.1	2.4e-27	96.92	uncharacterized protein LOC111459140 isoform X1 [Cucurbita moschata] >XP_0229962...	[more]

BLAST of Cmc11g0307221 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQB1	8.7e-31	100.00	Histidine-containing phosphotransfer protein 1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KBQ2	7.3e-30	98.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151650 PE=4 SV=1	[more]
A0A6J1K6C6	1.2e-27	96.92	uncharacterized protein LOC111491558 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K8A8	1.2e-27	96.92	uncharacterized protein LOC111491558 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H2N1	1.2e-27	96.92	uncharacterized protein LOC111459140 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cmc11g0307221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21105.1	8.3e-26	81.54	cytochrome-c oxidases;electron carriers	[more]
AT4G21105.2	2.0e-11	71.79	cytochrome-c oxidases;electron carriers	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039297	Cytochrome c oxidase subunit VII	PFAM	PF02238	COX7a	coord: 13..65 e-value: 1.1E-15 score: 57.7
IPR039296	Predicted cytochrome c oxidase subunit VII	PANTHER	PTHR35308	CYTOCHROME C OXIDASE SUBUNIT 7	coord: 3..70
None	No IPR available	PANTHER	PTHR35308:SF10	BNAA03G58550D PROTEIN	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0307221.1	Cmc11g0307221.1	mRNA