
Cmc11g0307091 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTTGTCCACGTCATCGCCTCTTCGCTTACTATAAATTTTCCCCATTTTCCTCGCTGCATCATCCATCAAACCGCAAAACGGTTCTACCTATCGTCGTTTCTCTCCTACGCTATTCGCCGCCGTTAAACTGGGTACCAACCGCCGTCCGTCCCGCGACGGAAAGTCTGGGAGTTATAACAACTCCGAAGCTCTCGATCTCCGCTTCGACCGGCGACTGAGGTATAACAAGAGAGGAGTACCATAGAGTACCTCATTTACTCTTTGATTCATATTTAGGAACGATGCCGAACCCTAGGTCTCACAGGAAGGGGAAACTTGCGGAGAAGTCGTCGTCATTCCACGGAGAGAGTCCGACCAAGACGGCGACGACGCTCCGGAGGCCGAAGACGGATCCGGAATTGTTGTCCTTCAAGAATCTAGGTTTACCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTCTAGGTCCAGTACAGGTGTTGATGTCGCCGGAAATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCCGCTTTTGGTCTTCATTACTCGCAATTCAGCTTAGAAAGTAAGCAACAATCGATTACCAAAAAAATTCTCGTAACTGCTTTCGATTTTGAATGAGTTATCGATCCTTTGTGAATTTCGCGGGCGATTCTAACGAGATAACGATTTGAATCTCAGGTTTAAACAAGGAAGAGAAGCTGATCGCGTTGGGATCCAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACAATTTAATTGCTTCTCCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTAATTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAGAAACCGCCATAAACCGAATCTATTCATACATACATATTCAATCCGCCACTGTGAAAACTCATCTTCAAATTCTCAAAGCCATATAACTTTTCTTATTATCTTCAATTCTAAGAACTTCTTAAAGCCAATTTGAGATATCAGAATTTCGATCGAGCAAAGGGAAACCGAAGATCATTTCTGGAATTCTGTTCTTCGTCTGCTTGCTCTGGATCGACACAGGGGAAATTTTCAATATGTATATATATAATATAGTTTTTGTGAGATTTCCGGTTGGTCGAATAGAAATTATGTGAAATTTTTTTGTTGAATTCATAGATCATTTTCTCATATTATGAAATTTCCCGATTCGATGAACAGAGTCACGGCAGGAAAAAAAAAATCCTGAGATTCCGTGAAGGATGAAGAAACTTCGTGAAAATAAAGTGTGGTGGAAAGGAAACTGACGGTTCGGTTTTGATATGGAAAGAGATACGTTTGTGAAGAACACAGTTATTGTGAAGTTCGATGTCTCCACCAACTCTTTCTTTTCTATTGCATACCCCTAAGTCTTATAAGGCACGTCAATTTGTATCCTTATAATTTTATTAATTAAAATATCTAAAATTTCTTATGTTATTTGTAAATATAAATTGATATTTGTTCTCTTCCATTTCTTATACAATCATGAAATAATGGTAACATTTCTAATTTTA AACTTGTCCACGTCATCGCCTCTTCGCTTACTATAAATTTTCCCCATTTTCCTCGCTGCATCATCCATCAAACCGCAAAACGGTTCTACCTATCGTCGTTTCTCTCCTACGCTATTCGCCGCCGTTAAACTGGGTACCAACCGCCGTCCGTCCCGCGACGGAAAGTCTGGGAGTTATAACAACTCCGAAGCTCTCGATCTCCGCTTCGACCGGCGACTGAGGTATAACAAGAGAGGAGTACCATAGAGTACCTCATTTACTCTTTGATTCATATTTAGGAACGATGCCGAACCCTAGGTCTCACAGGAAGGGGAAACTTGCGGAGAAGTCGTCGTCATTCCACGGAGAGAGTCCGACCAAGACGGCGACGACGCTCCGGAGGCCGAAGACGGATCCGGAATTGTTGTCCTTCAAGAATCTAGGTTTACCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTCTAGGTCCAGTACAGGTGTTGATGTCGCCGGAAATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCCGCTTTTGGTCTTCATTACTCGCAATTCAGCTTAGAAAGTTTAAACAAGGAAGAGAAGCTGATCGCGTTGGGATCCAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACAATTTAATTGCTTCTCCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTAATTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAGAAACCGCCATAAACCGAATCTATTCATACATACATATTCAATCCGCCACTGTGAAAACTCATCTTCAAATTCTCAAAGCCATATAACTTTTCTTATTATCTTCAATTCTAAGAACTTCTTAAAGCCAATTTGAGATATCAGAATTTCGATCGAGCAAAGGGAAACCGAAGATCATTTCTGGAATTCTGTTCTTCGTCTGCTTGCTCTGGATCGACACAGGGGAAATTTTCAATATGTATATATATAATATAGTTTTTGTGAGATTTCCGGTTGGTCGAATAGAAATTATGTGAAATTTTTTTGTTGAATTCATAGATCATTTTCTCATATTATGAAATTTCCCGATTCGATGAACAGAGTCACGGCAGGAAAAAAAAAATCCTGAGATTCCGTGAAGGATGAAGAAACTTCGTGAAAATAAAGTGTGGTGGAAAGGAAACTGACGGTTCGGTTTTGATATGGAAAGAGATACGTTTGTGAAGAACACAGTTATTGTGAAGTTCGATGTCTCCACCAACTCTTTCTTTTCTATTGCATACCCCTAAGTCTTATAAGGCACGTCAATTTGTATCCTTATAATTTTATTAATTAAAATATCTAAAATTTCTTATGTTATTTGTAAATATAAATTGATATTTGTTCTCTTCCATTTCTTATACAATCATGAAATAATGGTAACATTTCTAATTTTA ATGCCGAACCCTAGGTCTCACAGGAAGGGGAAACTTGCGGAGAAGTCGTCGTCATTCCACGGAGAGAGTCCGACCAAGACGGCGACGACGCTCCGGAGGCCGAAGACGGATCCGGAATTGTTGTCCTTCAAGAATCTAGGTTTACCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAAGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTCTAGGTCCAGTACAGGTGTTGATGTCGCCGGAAATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCCGCTTTTGGTCTTCATTACTCGCAATTCAGCTTAGAAAGTTTAAACAAGGAAGAGAAGCTGATCGCGTTGGGATCCAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACAATTTAATTGCTTCTCCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTAATTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAG MPNPRSHRKGKLAEKSSSFHGESPTKTATTLRRPKTDPELLSFKNLGLPASAPSLDGRPKMTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFGLHYSQFSLESLNKEEKLIALGSRNFFLCPRKSDDNNNLIASPSSSSCSKEAKESAKSNSSSFSWFKFIDFRI Homology
BLAST of Cmc11g0307091 vs. NCBI nr
Match: XP_008458628.1 (PREDICTED: uncharacterized protein At4g22758 [Cucumis melo] >KAA0033374.1 uncharacterized protein E6C27_scaffold111G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of Cmc11g0307091 vs. NCBI nr
Match: XP_004145782.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN46917.1 hypothetical protein Csa_020746 [Cucumis sativus]) HSP 1 Score: 339.0 bits (868), Expect = 2.7e-89 Identity = 180/188 (95.74%), Postives = 182/188 (96.81%), Query Frame = 0
BLAST of Cmc11g0307091 vs. NCBI nr
Match: XP_038902782.1 (uncharacterized protein At4g22758 [Benincasa hispida]) HSP 1 Score: 320.9 bits (821), Expect = 7.6e-84 Identity = 173/188 (92.02%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Cmc11g0307091 vs. NCBI nr
Match: KAG6606010.1 (hypothetical protein SDJN03_03327, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035960.1 hypothetical protein SDJN02_02760, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310.8 bits (795), Expect = 7.8e-81 Identity = 163/188 (86.70%), Postives = 175/188 (93.09%), Query Frame = 0
BLAST of Cmc11g0307091 vs. NCBI nr
Match: XP_022958439.1 (uncharacterized protein At4g22758 [Cucurbita moschata]) HSP 1 Score: 310.8 bits (795), Expect = 7.8e-81 Identity = 163/188 (86.70%), Postives = 176/188 (93.62%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.4e-08 Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy TrEMBL
Match: A0A5A7SQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00230 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy TrEMBL
Match: A0A1S3C8V7 (uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103497975 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy TrEMBL
Match: A0A0A0KES9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150560 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 180/188 (95.74%), Postives = 182/188 (96.81%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy TrEMBL
Match: A0A6J1H539 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81 Identity = 163/188 (86.70%), Postives = 176/188 (93.62%), Query Frame = 0
BLAST of Cmc11g0307091 vs. ExPASy TrEMBL
Match: A0A6J1K3Z9 (uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC111491488 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 8.4e-81 Identity = 163/188 (86.70%), Postives = 176/188 (93.62%), Query Frame = 0
BLAST of Cmc11g0307091 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 172.2 bits (435), Expect = 4.0e-43 Identity = 102/185 (55.14%), Postives = 131/185 (70.81%), Query Frame = 0
BLAST of Cmc11g0307091 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09 Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Cmc11g0307091 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06 Identity = 25/88 (28.41%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Cmc11g0307091 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05 Identity = 35/121 (28.93%), Postives = 64/121 (52.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|