Cmc11g0305961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 27229327 .. 27233361 (-)
RNA-Seq Expression	Cmc11g0305961
Synteny	Cmc11g0305961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTACACGATTTGAAGTGTCCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGAAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTTGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGGTGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTATTGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATTTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAATTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGACACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCTACTAGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTAAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGTTACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATCCCATATTGTAATGCTGTTGGGAGCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGCTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTAGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

mRNA sequence

ATGGCTTCTACACGATTTGAAGTGTCCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGAAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTTGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGGTGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTATTGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATTTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAATTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGACACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCTACTAGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTAAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGTTACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATCCCATATTGTAATGCTGTTGGGAGCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGCTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTAGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Coding sequence (CDS)

ATGGCTTCTACACGATTTGAAGTGTCCAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGAAAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAGATATATATAAAGGAGAAGTTTTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTTGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGGTGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACTATTGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATTTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATCGCGTCAGGTAAAATTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAATTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGACACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCTACTAGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTAAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGTTACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAAAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTTTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATCCCATATTGTAATGCTGTTGGGAGCATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCTGTTAAATGGGTGTTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGATCTTGATAAAAGAAGGTCCTTATCGGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACTTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGCTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTAGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Protein sequence

MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG

Homology

[Close]

BLAST of Cmc11g0305961 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2658.6 bits (6890), Expect = 0.0e+00
Identity = 1332/1344 (99.11%), Postives = 1336/1344 (99.40%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1345
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]

BLAST of Cmc11g0305961 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 2542.7 bits (6589), Expect = 0.0e+00
Identity = 1282/1331 (96.32%), Postives = 1288/1331 (96.77%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+T+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI F TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1303

[Close]

BLAST of Cmc11g0305961 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2493.4 bits (6461), Expect = 0.0e+00
Identity = 1265/1331 (95.04%), Postives = 1269/1331 (95.34%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1283

[Close]

BLAST of Cmc11g0305961 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2341.6 bits (6067), Expect = 0.0e+00
Identity = 1166/1174 (99.32%), Postives = 1168/1174 (99.49%), Query Frame = 0


Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1345
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]

BLAST of Cmc11g0305961 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2040.0 bits (5284), Expect = 0.0e+00
Identity = 1064/1226 (86.79%), Postives = 1077/1226 (87.85%), Query Frame = 0


Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVT GYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT V Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIK ENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRF TFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 KEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQE IPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1332
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 3.2e-296
Identity = 560/1347 (41.57%), Postives = 822/1347 (61.02%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILD-EERLPENITESEKRDMDEMAY 60
            M+  ++EV+KFNG   F+ W++++R +L+Q  + K+LD + + P+ +   +  D+DE A 
Sbjct: 1    MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61   STILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLE 120
            S I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M +  +  
Sbjct: 61   SAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 121  ENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDAL 180
             +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G+ ++ +  V  AL
Sbjct: 121  SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 181  KTRNLEIKKERKDGELLM--ARGRSEKKSWKGKERS-----FRSKSKGKSRKCFLCHKEG 240
                   KK    G+ L+   RGRS ++S     RS      +++SK + R C+ C++ G
Sbjct: 181  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 240

Query: 241  HFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIM 300
            HFK++CP  +  +  TS        N+A +    D+        E  M      +  W++
Sbjct: 241  HFKRDCPNPRKGKGETS--GQKNDDNTAAMVQNNDNVVLFINEEEECM-HLSGPESEWVV 300

Query: 301  DSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYV 360
            D+  + H TP RD    +   D G V +G+     + G G + I T+ G   +L  VR+V
Sbjct: 301  DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 360

Query: 361  PKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIA 420
            P L+ NLIS   LDR G    F N   ++TKGSLV  +G  R  LY        G    A
Sbjct: 361  PDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAA 420

Query: 421  SGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGK 480
              +I+    LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  RV F    
Sbjct: 421  QDEIS--VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSS 480

Query: 481  HTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKK 540
                 ILD V+SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F  F ++  
Sbjct: 481  ERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHA 540

Query: 541  QVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIME 600
             VE +TGRK+K LR+DNG E+ + +F ++C S GI    TV  TPQ NG+AER NRTI+E
Sbjct: 541  LVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVE 600

Query: 601  RTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCT 660
            + R +L  A LP  FWGEA QTACYLINRSPS  L  + P+ VWT K  S  HL+VFGC 
Sbjct: 601  KVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCR 660

Query: 661  AYAHV---KDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYC 720
            A+AHV   +  KL+ +++ C+FIGY     GY+LW  +    K I SRDV F E+E+   
Sbjct: 661  AFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW--DPVKKKVIRSRDVVFRESEVRTA 720

Query: 721  VKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIED--TQQSEFDGIQSQQERIL 780
                +K + G  +   V I S         N P       D  ++Q E  G   +Q   L
Sbjct: 721  ADMSEKVKNG-IIPNFVTIPS-------TSNNPTSAESTTDEVSEQGEQPGEVIEQGEQL 780

Query: 781  IDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF 840
             DEG    E  +  + Q+  L R   +R R    RY   + V         S + EP + 
Sbjct: 781  -DEGVEEVEHPTQGEEQHQPLRRS--ERPRVESRRYPSTEYVLI-------SDDREPESL 840

Query: 841  KEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPR 900
            KE +    K Q   AM+EE+ SL KN T+ LV  P  ++ ++ KW++K+K   G     R
Sbjct: 841  KEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK-DGDCKLVR 900

Query: 901  YKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELE 960
            YKARLV KG+ QK+G+DF EIFSPVV+ +SIR ILS+A   D+ +EQ+DV TAFLHG+LE
Sbjct: 901  YKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLE 960

Query: 961  EVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVY 1020
            E IYM QP+G+EV GK+ MVC+L+KSLYGLKQ+PRQWY++F +F+  Q + +   D CVY
Sbjct: 961  EEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVY 1020

Query: 1021 WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDK 1080
            +K+  +  +I LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM + R++
Sbjct: 1021 FKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRER 1080

Query: 1081 EKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCN 1140
                L +SQE Y+ ++LE++NM  +K VSTPLA H +LS   CP T +E+  M+ +PY +
Sbjct: 1081 TSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSS 1140

Query: 1141 AVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCD 1200
            AVGS+MY M+CTRPD+ +A+ ++SRF+ NPGKEHW+AVKW+LRYL+G+    LC+     
Sbjct: 1141 AVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG---G 1200

Query: 1201 KSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEA 1260
               +L+G+TDAD A D+D R+S +G++F   G  +SW+  LQ  VALSTTE+EYI+  E 
Sbjct: 1201 SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATET 1260

Query: 1261 VKEAVWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQK 1320
             KE +WLKR + EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR ++  +
Sbjct: 1261 GKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDE 1317

Query: 1321 DVELVKVHTVENLSDMLTKALSAHRFK 1334
             ++++K+ T EN +DMLTK +  ++F+
Sbjct: 1321 SLKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 639.4 bits (1648), Expect = 9.0e-182
Identity = 448/1453 (30.83%), Postives = 742/1453 (51.07%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            M   +  +  F+G   +A+W+ +IRA+L +  V K++D   +P  + +S K+  +  A S
Sbjct: 1    MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVD-GLMPNEVDDSWKK-AERCAKS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TI+ YLSD  L       T  ++ + L+++Y  KSL +++ ++++    K+    SL  +
Sbjct: 61   TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALK 180
               F +++ +L   G K+ + ++   LL +LP  Y  +  AI+    ++LT++ V + L 
Sbjct: 121  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 180

Query: 181  TRNLEIKKERKD--GELLMARGRSEKKSWKG---KERSFRSKS--KGKSR---KCFLCHK 240
             + ++IK +  D   +++ A   +   ++K    K R  + K   KG S+   KC  C +
Sbjct: 181  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 240

Query: 241  EGHFKKNC-----PLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRD 300
            EGH KK+C      LN   + +  +      +  A +               V  V++  
Sbjct: 241  EGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFM---------------VKEVNNTS 300

Query: 301  IQD--AWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMV 360
            + D   +++DSG + H+       T+  +V     +        V   G    AT  G+V
Sbjct: 301  VMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA-------VAKQGEFIYATKRGIV 360

Query: 361  RI-------LTIVRYVPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSL--VKLRGTLR 420
            R+       L  V +  +   NL+S+  L  +G +I+F+   + ++K  L  VK  G L 
Sbjct: 361  RLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLN 420

Query: 421  HGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVE 480
            +         ++  A   + K  +   LWH+R  H+S+  L  + ++ +      + N+E
Sbjct: 421  N------VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE 480

Query: 481  L--PFCEHCIMGKSTRVKFGKGKHTT--KGILDYVHSDLWGPTKEVSMGGSRYFISIIDD 540
            L    CE C+ GK  R+ F + K  T  K  L  VHSD+ GP   V++    YF+  +D 
Sbjct: 481  LSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQ 540

Query: 541  FSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGI 600
            F+     Y +K K + F  F ++  + E     KV YL  DNG E+++N+  QFC  +GI
Sbjct: 541  FTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGI 600

Query: 601  TRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL 660
            + H TV +TPQ NG++ER  RTI E+ R +++ A L   FWGEA  TA YLINR PS AL
Sbjct: 601  SYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRAL 660

Query: 661  --NLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCMFIGYPQGVKGYKL 720
              + KTP E+W  K P L+HLRVFG T Y H+K+  GK + ++ K +F+GY     G+KL
Sbjct: 661  VDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKL 720

Query: 721  WCIEKGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP 780
            W  +    K I++RDV  +ET M            +K+ ++ +  +      +I     P
Sbjct: 721  W--DAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFP 780

Query: 781  --SIDLDNQPLLVSEIEDTQQSEFDGIQSQQERIL----------IDEGAFIEESSSNND 840
              S + DN    +  ++D+++SE     +   +I+           D   F+++S  +N 
Sbjct: 781  NESKECDN----IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNK 840

Query: 841  L----------------------------------------------QNYQLTRDRVQRE 900
                                                              ++   R +R 
Sbjct: 841  YFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERL 900

Query: 901  RHAP-IRYGYADLVAYALTCAADSIEAE-PLTFKEAIVSDSKKQWKDAMEEELFSLHKNQ 960
            +  P I Y   D     +   A +I  + P +F E    D K  W++A+  EL +   N 
Sbjct: 901  KTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINN 960

Query: 961  TWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVR 1020
            TW++  +P N+ ++ S+W++ +K    GN   RYKARLVA+G+TQK  +D+ E F+PV R
Sbjct: 961  TWTITKRPENKNIVDSRWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETFAPVAR 1020

Query: 1021 HSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSL 1080
             SS R ILS+ + +++ + QMDV TAFL+G L+E IYM  P+G  +    D VC+L+K++
Sbjct: 1021 ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAI 1080

Query: 1081 YGLKQSPRQWYIRFVTFILKQGFHRNSYDACVY-WKQSQKGTYIYLLLYVDDMILVSKDY 1140
            YGLKQ+ R W+  F   + +  F  +S D C+Y   +      IY+LLYVDD+++ + D 
Sbjct: 1081 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1140

Query: 1141 AEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGSK 1200
              +   K+ L  +F M DL E+K  +G+ ++  ++K  + +SQ +YV K+L K+NM    
Sbjct: 1141 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNMENCN 1200

Query: 1201 AVSTPLAS--HFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMIS 1260
            AVSTPL S  ++ L +S          E  N P  + +G +MY+M+CTRPDL  A++++S
Sbjct: 1201 AVSTPLPSKINYELLNSD---------EDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1260

Query: 1261 RFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLS 1320
            R+ S    E W+ +K VLRYLKG+  + L + ++      + G+ D+D+A     R+S +
Sbjct: 1261 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1320

Query: 1321 GHIFRLYG-NVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQELIPI- 1342
            G++F+++  N++ W    Q  VA S+TE+EY++L EAV+EA+WLK ++  +  +   PI 
Sbjct: 1321 GYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIK 1380

[Close]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.3e-144
Identity = 430/1470 (29.25%), Postives = 684/1470 (46.53%), Query Frame = 0


Query: 16   DFALWRKKIRAILVQHKVAKILD-----------EERLPE-NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD            + +P  N   +  R  D++ YS IL
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIK-------EKFFGYKMDQSKS 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++           G  MD  + 
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQ 149

Query: 136  LE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIK 195
            +E   ENL +  K V+D          L  I E++ +    ++ LNS       + A + 
Sbjct: 150  VERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV--PITANVV 209

Query: 196  YGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRK 255
              R++ T          RN   + + ++      R  S + S  G  RS   + K    +
Sbjct: 210  THRNTNT---------NRNQNNRGDNRNYNNNNNRSNSWQPSSSG-SRSDNRQPKPYLGR 269

Query: 256  CFLCHKEGHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHR 315
            C +C  +GH  K CP     +++T++   T  +             T ++    L V+  
Sbjct: 270  CQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPF-------------TPWQPRANLAVNSP 329

Query: 316  DIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMV 375
               + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS  + T    +
Sbjct: 330  YNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSL 389

Query: 376  RILTIVRYVPKLKRNLISLGEL-DRSGCTIKF--ENGVMKVTKGSLVKLRGTLRHGLY-- 435
              L  V YVP + +NLIS+  L + +  +++F   +  +K     +  L+G  +  LY  
Sbjct: 390  D-LNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEW 449

Query: 436  -VLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCE 495
             +     VS  A+  S K T  S  WH RL H S   L + +S   L     + +L  C 
Sbjct: 450  PIASSQAVSMFASPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCS 509

Query: 496  HCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYP 555
             C + KS +V F     T+   L+Y++SD+W  +  +S+   RY++  +D F+R  W+YP
Sbjct: 510  DCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYP 569

Query: 556  LKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYT 615
            LKQK +    F+ +K  VEN+   ++  L +DNG EFV      +    GI+   +  +T
Sbjct: 570  LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHT 629

Query: 616  PQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVW 675
            P+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +  
Sbjct: 630  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 689

Query: 676  TGKAPSLEHLRVFGCTAYAHVKD---GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKC 735
             G+ P+ E L+VFGC  Y  ++     KL  ++ +C F+GY      Y   C+     + 
Sbjct: 690  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAY--LCLHIPTGRL 749

Query: 736  IISRDVTFNETEMPYC-----VKEQQKQQT-------------------------GDHVV 795
              SR V F+E   P+      V   Q+Q++                         G H+ 
Sbjct: 750  YTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLD 809

Query: 796  TEVRIASEVRP--SIDLDNQPLLVSEIEDTQQSE-----FDG---------IQSQQERIL 855
            T  R  S   P  +  + +  L  S I     SE      +G          Q+      
Sbjct: 810  TSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSP 869

Query: 856  IDEGAFIEESSSNNDLQNYQLTRDR----------------------------------- 915
            I         S N+  QN  L +                                     
Sbjct: 870  ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPA 929

Query: 916  ---VQRERHAPIR-YGYA-----------DLVAYALTCAADSIEAEPLTFKEAIVSDSKK 975
               +Q    AP+  +  A              +YA + AA+S   EP T  +A+  D   
Sbjct: 930  PPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANS---EPRTAIQAMKDD--- 989

Query: 976  QWKDAMEEELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKG 1035
            +W+ AM  E+ +   N TW LV P PP+  ++  +WI+  K  + G S  RYKARLVAKG
Sbjct: 990  RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKG 1049

Query: 1036 YTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPK 1095
            Y Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+QP 
Sbjct: 1050 YNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPP 1109

Query: 1096 GYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTY 1155
            G+  K + D VCRL K++YGLKQ+PR WY+   T++L  GF  +  D  ++  Q  + + 
Sbjct: 1110 GFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SI 1169

Query: 1156 IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQ 1215
            IY+L+YVDD+++   D   +      LS  F +K+  +L   LG++ KR  +   L +SQ
Sbjct: 1170 IYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQ 1229

Query: 1216 ESYVIKLLEKYNMSGSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIM 1275
              Y + LL + NM  +K V+TP+A+  +L   S ++ P   +         Y   VGS+ 
Sbjct: 1230 RRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE---------YRGIVGSLQ 1289

Query: 1276 YLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLE 1335
            YL   TRPDL YA++ +S++M  P  +HW A+K VLRYL G+    +   +    +  L 
Sbjct: 1290 YLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK--GNTLSLH 1349

Query: 1336 GFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1342
             ++DAD+A D D   S +G+I  L  + +SW    Q  V  S+TE+EY S+     E  W
Sbjct: 1350 AYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQW 1409

[Close]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 9.1e-142
Identity = 411/1470 (27.96%), Postives = 683/1470 (46.46%), Query Frame = 0


Query: 16   DFALWRKKIRAILVQHKVAKILD-----------EERLPE-NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD            +  P  N   +  +  D++ YS +L
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDE 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +K++++ +  
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQG 149

Query: 136  FQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT----------- 195
                   L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT           
Sbjct: 150  LVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES 209

Query: 196  ----------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSWKGKERSF--- 255
                      + I  +A+  RN        +G            +  K W+    +F   
Sbjct: 210  KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN 269

Query: 256  RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYE 315
             ++SK    KC +C  +GH  K C         +   +     NS +    +    T ++
Sbjct: 270  NNQSKPYLGKCQICGVQGHSAKRC---------SQLQHFLSSVNSQQPPSPF----TPWQ 329

Query: 316  SAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGS 375
                L +      + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS
Sbjct: 330  PRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGS 389

Query: 376  VQIATHDGMVRILTIVRYVPKLKRNLISLGEL-DRSGCTIKF--ENGVMKVTKGSLVKLR 435
              ++T    + +  I+ YVP + +NLIS+  L + +G +++F   +  +K     +  L+
Sbjct: 390  TSLSTKSRPLNLHNIL-YVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQ 449

Query: 436  GTLRHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNV 495
            G  +  LY     +    +  AS         WH RL H +   L ++     L  V N 
Sbjct: 450  GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSL-SVLNP 509

Query: 496  ELPF--CEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDF 555
               F  C  C++ KS +V F +    +   L+Y++SD+W  +  +S    RY++  +D F
Sbjct: 510  SHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHF 569

Query: 556  SRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGIT 615
            +R  W+YPLKQK +    F+ +K  +EN+   ++    +DNG EFV     ++    GI+
Sbjct: 570  TRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGIS 629

Query: 616  RHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALN 675
               +  +TP+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L 
Sbjct: 630  HLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQ 689

Query: 676  LKTPQEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCMFIGYPQGVKGYKLWC 735
            L++P +   G +P+ + LRVFGC  Y  ++     KL+ ++ +C+F+GY      Y   C
Sbjct: 690  LESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY--LC 749

Query: 736  IEKGMNKCIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR------- 795
            +    ++  ISR V F+E   P+         V+EQ+++ +     H     R       
Sbjct: 750  LHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAP 809

Query: 796  --------IASEVRPSIDLDNQPLLVSEIEDTQQSEF-----------DGIQSQQERILI 855
                          PS    N  +  S ++ +  S F           +G Q   +    
Sbjct: 810  SCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQT 869

Query: 856  DEGAFIEESSSNNDLQN---YQLTRDR--------------------------------- 915
                   +++S N+  N    QL +                                   
Sbjct: 870  QTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHP 929

Query: 916  -------VQRERHAPIR------YGYADLV----AYALTCAADSIEAEPLTFKEAIVSDS 975
                   V     AP+          A ++     Y+L  +  + E+EP T   AI +  
Sbjct: 930  PPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL-AAESEPRT---AIQALK 989

Query: 976  KKQWKDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKPGTGGNSKPRYKARLVA 1035
             ++W++AM  E+ +   N TW LVP PP+   ++  +WI+  K  + G S  RYKARLVA
Sbjct: 990  DERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKARLVA 1049

Query: 1036 KGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQ 1095
            KGY Q+ G+D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+Q
Sbjct: 1050 KGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQ 1109

Query: 1096 PKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKG 1155
            P G+  K + + VC+L K+LYGLKQ+PR WY+    ++L  GF  +  D  ++  Q  K 
Sbjct: 1110 PPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGK- 1169

Query: 1156 TYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTI 1215
            + +Y+L+YVDD+++   D   +      LS  F +KD  EL   LG++ KR      L +
Sbjct: 1170 SIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHL 1229

Query: 1216 SQESYVIKLLEKYNMSGSKAVSTPLASHFRLS-SSQCPVTKQERIEMSNIPYCNAVGSIM 1275
            SQ  Y++ LL + NM  +K V+TP+A   +LS  S   +T           Y   VGS+ 
Sbjct: 1230 SQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-------YRGIVGSLQ 1289

Query: 1276 YLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLE 1335
            YL   TRPD+ YA++ +S+FM  P +EH +A+K +LRYL G+ +  +   +    +  L 
Sbjct: 1290 YLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK--GNTLSLH 1349

Query: 1336 GFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1342
             ++DAD+A D D   S +G+I  L  + +SW    Q  V  S+TE+EY S+     E  W
Sbjct: 1350 AYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQW 1409

[Close]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.2e-42
Identity = 274/1343 (20.40%), Postives = 519/1343 (38.64%), Query Frame = 0


Query: 281  SHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDG 340
            S+ ++ D  ++DSG +  +     +L +        ++        +   G++     +G
Sbjct: 446  SNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNG 505

Query: 341  MVRILTIVRYVPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLE 400
                +  + + P +  +L+SL EL     T  F    ++ + G++  L   ++HG +   
Sbjct: 506  TKTSIKAL-HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTV--LAPIVKHGDFYWL 565

Query: 401  GTTVSGSAAIASGKITDMSM----------LWHKRLAHVSERGLQALSQQGLLGGVKNVE 460
                   + I+   I +++           L H+ L H + R +Q   ++  +  +K  +
Sbjct: 566  SKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESD 625

Query: 461  LPF-------CEHCIMGKSTRVKFGKGK----HTTKGILDYVHSDLWGPTKEVSMGGSRY 520
            + +       C  C++GKST+ +  KG       +     Y+H+D++GP   +      Y
Sbjct: 626  IEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSY 685

Query: 521  FISIIDDFSRKVWIYPL--KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKF 580
            FIS  D+ +R  W+YPL  ++++     F      ++NQ   +V  ++ D G E+ N   
Sbjct: 686  FISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTL 745

Query: 581  NQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYL 640
            ++F  + GIT  +T T   + +G+AER NRT++   R LL  + LP   W  A + +  +
Sbjct: 746  HKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFST-I 805

Query: 641  INRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA--HVKDGKLNKRALKCMFIGYPQ 700
            I  S  +  N K+ ++        +  +  FG       H  D K++ R +    +   +
Sbjct: 806  IRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSR 865

Query: 701  GVKGYKLW--CIEKGMN--KCIISRD------------VTF-----------------NE 760
               GY ++   ++K ++    +I +D            +TF                 NE
Sbjct: 866  NSYGYIIYLPSLKKTVDTTNYVILQDNQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNE 925

Query: 761  TEMPYCVKEQQKQQTGDHVVTEVRI---------ASEVRPSIDLDNQPL----LVSEIED 820
            TE  Y     Q  ++     +E+ I         +S+    + LD++P+     + E+ D
Sbjct: 926  TEQSY----DQNTESDHDYQSEIEINSDPLVNDFSSQSMNPLQLDHEPVQKVRALKEV-D 985

Query: 821  TQQSEFD----GIQSQQERILIDE----GAFIEESSS----------------------- 880
               SE++     ++S+   I+  E    G  IE  ++                       
Sbjct: 986  ADISEYNILPSPVRSRTPHIINKESTEMGGTIESDTTSPRHSSTFTARNQKRPGSPNDMI 1045

Query: 881  --------NNDLQNYQLTR------DRVQRERHAPIRY-----------------GYADL 940
                    N +L+N + TR        +QR     I+Y                     +
Sbjct: 1046 DLTSQDRVNYELENIKTTRLGGTEEPYIQRNSDTNIKYRTTNSTPSIDDRSPDSDSTTPI 1105

Query: 941  VAYALTCAAD---SIEAEPLTFKEA------IVSD--SKKQWKDAMEEEL---------- 1000
            ++     A D   SI+ +P  ++ +      I+ D  SK    D++ ++L          
Sbjct: 1106 ISIETKAACDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSP 1165

Query: 1001 --------------------------------------FSLHKNQTWSLVPK-------- 1060
                                                   SL  N+T   V +        
Sbjct: 1166 TDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNM 1225

Query: 1061 ----PPNQK-----LIQSKWIYKIKP-------------GTGGNSKPRY----------- 1120
                PP  K     +   K +  IKP                   K RY           
Sbjct: 1226 RSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNEDNKEKDRYIEAYHKEINQL 1285

Query: 1121 -------------------------------------KARLVAKGYTQKEGVDFHEIFSP 1180
                                                 KAR VA+G  Q       ++ S 
Sbjct: 1286 LRMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSN 1345

Query: 1181 VVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 1240
             V H ++   LSIA+  D +I Q+D+++A+L+ +++E +Y+  P      G  D + RL 
Sbjct: 1346 TVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHL---GLNDKLLRLR 1405

Query: 1241 KSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVY--WKQSQKGTYIYLLLYVDDMILV 1300
            KSLYGLKQS   WY    ++++      N  D      W    K + + + L+VDDMIL 
Sbjct: 1406 KSLYGLKQSGANWYETIKSYLI------NCCDMQEVRGWSCVFKNSQVTICLFVDDMILF 1465

Query: 1301 SKDYAEICELKKQLSNEFEMK--DLGELKR-----ILGMDVKRDKEKGLLTISQESYVIK 1339
            SKD     ++   L  +++ K  +LGE        ILG+++K  + K  + +  E  + +
Sbjct: 1466 SKDLNANEKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSK-YMKLGMEKSLTE 1525

[Close]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 2658.6 bits (6890), Expect = 0.0e+00
Identity = 1332/1344 (99.11%), Postives = 1336/1344 (99.40%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1345
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 2542.7 bits (6589), Expect = 0.0e+00
Identity = 1282/1331 (96.32%), Postives = 1288/1331 (96.77%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+T+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI F TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1303

[Close]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 2493.4 bits (6461), Expect = 0.0e+00
Identity = 1265/1331 (95.04%), Postives = 1269/1331 (95.34%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPENITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLP+NITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSM 420
            LGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK+TDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

Query: 1321 DMLTKALSAHR 1332
            DMLTKALSAHR
Sbjct: 1321 DMLTKALSAHR 1283

[Close]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 2341.6 bits (6067), Expect = 0.0e+00
Identity = 1166/1174 (99.32%), Postives = 1168/1174 (99.49%), Query Frame = 0


Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVT GYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT VRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIK ENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRF TFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQE IPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1345
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL
Match: A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)

HSP 1 Score: 2040.0 bits (5284), Expect = 0.0e+00
Identity = 1064/1226 (86.79%), Postives = 1077/1226 (87.85%), Query Frame = 0


Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTGGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVT GYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTIVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILT V Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKFENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIK ENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKITDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGK+TDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPLLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQP LVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFKEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTF+EAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFVTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRF TFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 KEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQELIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQE IPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1332
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]

BLAST of Cmc11g0305961 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 304.7 bits (779), Expect = 3.7e-82
Identity = 183/494 (37.04%), Postives = 288/494 (58.30%), Query Frame = 0


Query: 812  LTCAADSIEAEPLTFKEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKW 871
            L C A +   EP T+ EA        W  AM++E+ ++    TW +   PPN+K I  KW
Sbjct: 77   LVCIAKA--KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKW 136

Query: 872  IYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFI 931
            +YKIK  + G  + RYKARLVAKGYTQ+EG+DF E FSPV + +S++LIL+I+  ++  +
Sbjct: 137  VYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 196

Query: 932  EQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDM----VCRLHKSLYGLKQSPRQWYIRF 991
             Q+D++ AFL+G+L+E IYM  P GY  +  + +    VC L KS+YGLKQ+ RQW+++F
Sbjct: 197  HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 256

Query: 992  VTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFE 1051
               ++  GF ++  D   Y+ +     ++ +L+YVDD+I+ S + A + ELK QL + F+
Sbjct: 257  SVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 316

Query: 1052 MKDLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSS 1111
            ++DLG LK  LG+++ R      + I Q  Y + LL++  + G K  S P+      S+ 
Sbjct: 317  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 376

Query: 1112 QCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWV 1171
                +  + ++     Y   +G +MYL I TR D+ +A++ +S+F   P   H +AV  +
Sbjct: 377  ----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 436

Query: 1172 LRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNL 1231
            L Y+KG+    L YS   +    L+ F+DA + +  D RRS +G+   L  +++SWK   
Sbjct: 437  LHYIKGTVGQGLFYSSQAEMQ--LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 496

Query: 1232 QPVVALSTTESEYISLGEAVKEAVWLKRIVGEL-LSQELIPIIHCDSQSAIHLAKNPSHH 1291
            Q VV+ S+ E+EY +L  A  E +WL +   EL L      ++ CD+ +AIH+A N   H
Sbjct: 497  QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 552

Query: 1292 ERSKHIDVKFHYIR 1301
            ER+KHI+   H +R
Sbjct: 557  ERTKHIESDCHSVR 552

[Close]

BLAST of Cmc11g0305961 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25
Identity = 80/237 (33.76%), Postives = 124/237 (52.32%), Query Frame = 0


Query: 1016 IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQ 1075
            +YLLLYVDD++L       +  L  QLS+ F MKDLG +   LG+ +K       L +SQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 60

Query: 1076 ESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLM 1135
              Y  ++L    M   K +STPL    +L+SS       +  +  +I     VG++ YL 
Sbjct: 61   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQYLT 120

Query: 1136 ICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFT 1195
            + TRPD+ YA++++ + M  P    +  +K VLRY+KG+    L   ++   +  ++ F 
Sbjct: 121  L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180

Query: 1196 DADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1253
            D+D+A     RRS +G    L  N++SW    QP V+ S+TE+EY +L     E  W
Sbjct: 181  DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0305961 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 115.2 bits (287), Expect = 4.2e-25
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 376 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKITDMSMLWHKRLAHVSERGLQ 435
           GV+KV KG    L+G     LY+L+G+  +G + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 436 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWG 488
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDYVHSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of Cmc11g0305961 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-18
Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 810 YALTCAADSIEAEPLTFKEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQS 869
           Y+LT    +I+ EP   K  I +     W  AM+EEL +L +N+TW LVP P NQ ++  
Sbjct: 16  YSLTITT-TIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGC 75

Query: 870 KWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDM 929
           KW++K K  + G +  R KARLVAKG+ Q+EG+ F E +SPVVR ++IR IL++A   ++
Sbjct: 76  KWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130

[Close]

BLAST of Cmc11g0305961 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.4e-17
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 586 NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHL 645
           NRTI+E+ R +L    LP  F  +AA TA ++IN+ PSTA+N   P EVW    P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 646 RVFGCTAYAHVKDGKLNKRALK 668
           R FGC AY H  +GKL  RA K
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKK 83

The following BLAST results are available for this feature:

BLAST of Cmc11g0305961 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050719.1	0.0e+00	99.11	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0047995.1	0.0e+00	96.32	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
TYK25306.1	0.0e+00	95.04	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK13826.1	0.0e+00	99.32	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0043826.1	0.0e+00	86.79	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0305961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.2e-296	41.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	9.0e-182	30.83	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.3e-144	29.25	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.1e-142	27.96	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12491	2.2e-42	20.40	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0305961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB25	0.0e+00	99.11	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7U2U7	0.0e+00	96.32	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3DNU1	0.0e+00	95.04	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3CTV2	0.0e+00	99.32	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488...	[more]
A0A5A7TP18	0.0e+00	86.79	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Cmc11g0305961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.7e-82	37.04	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.4e-25	33.76	DNA/RNA polymerases superfamily protein	[more]
ATMG00300.1	4.2e-25	49.11	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	5.0e-18	44.17	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	9.4e-17	48.78	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	GENE3D	4.10.60.10		coord: 196..251 e-value: 2.1E-6 score: 29.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 54..179 e-value: 1.6E-30 score: 105.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..217
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..1212
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1192..1329 e-value: 4.33023E-66 score: 217.336
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 223..239 e-value: 0.004 score: 26.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 222..238 score: 9.553822
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 395..462 e-value: 4.4E-16 score: 58.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 470..650 e-value: 4.9E-45 score: 155.2
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 852..1098 e-value: 3.7E-71 score: 239.6
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 481..576 e-value: 1.5E-10 score: 41.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 471..639 score: 24.214426
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 851..1297
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 479..648
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 208..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305961.1	Cmc11g0305961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding