Cmc11g0305921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein transport protein Sec61 subunit beta
Location	CMiso1.1chr11: 27211223 .. 27212391 (+)
RNA-Seq Expression	Cmc11g0305921
Synteny	Cmc11g0305921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATAATAATTAAATTAATAATATGATTTTGGTGAAATATTCACTCTTATTCAATATTCAGTGTTCAATAGTCTTTTTAGGCTTTCTCGTTCTCGTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTAATTTCCCACCGATCCGATTTTTCTCCCAAATTCACATACTTCCGATCATCTTCTCCGATTCCCAAATCCATGGCAAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACCGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACAGCTGGCCTCCGCCGCCGCCGTCCCGGCTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGAAACATGCTGAGATTCTACACTGACGATGCTCCAGGCTTAAAGATTTCTCCCACTGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGAGTTTAATTCTATGCTCATTTTGTTTACCGTGCTTTTTCCCTTCCCGATCTTTTCATTTCCTAGATTAAATGTTCAAGTATCTCTGTAAATTTCACAATCGTTGTTGTACTTTTTTGAGTTTTCAATTCCATCACTGTTGTGGACGTATCAAAGGTAGCAAGATCGTTCTTTAGCTGATAATTTCTCTTTAGATCAATCTAGTTCTTGTGAATGATGCGGATTGCAGGGTTTCTTCTTTTTCGTCTCGGTATTGAGTTTATTCTATTTCTCACTCAAAGTTGTGCTTTTATATGGTATGAAGATTAGCTGTTTCTTCTAGATTTTGATTTGGATGAGTTAGTGGGGATTCTATATACGGTTTCTTCTTTATTAGCAGTTAAACTTTGTACGTTTTCGGATGGATACTCACACATTAGATTCGTTTATTAAAGTTGATGTTTGATTTTGTCATTTCTACTTAGAATTAAAGTTGAGAAGATAGAATCAGACTTCATTAAAAAAAAAAAAGCTTCTTTTGTTTTGTGGATTTCTTGTTTTTACCTTTTTATCATTTGCCTTTTACAAGTGAGTGAAGTGGAAAGTGTGCATGAAGGCATCTATTGTTAAGAAGGTTAAGGTATTTAGCTTAGAGGATGGATAATTTGACT

mRNA sequence

TTTGATAATAATTAAATTAATAATATGATTTTGGTGAAATATTCACTCTTATTCAATATTCAGTGTTCAATAGTCTTTTTAGGCTTTCTCGTTCTCGTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTAATTTCCCACCGATCCGATTTTTCTCCCAAATTCACATACTTCCGATCATCTTCTCCGATTCCCAAATCCATGGCAAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACCGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACAGCTGGCCTCCGCCGCCGCCGTCCCGGCTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGAAACATGCTGAGATTCTACACTGACGATGCTCCAGGCTTAAAGATTTCTCCCACTGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGAGTTTAATTCTATGCTCATTTTGTTTACCGTGCTTTTTCCCTTCCCGATCTTTTCATTTCCTAGATTAAATGTTCAAGTATCTCTGTAAATTTCACAATCGTTGTTGTACTTTTTTGAGTTTTCAATTCCATCACTGTTGTGGACGTATCAAAGGTAGCAAGATCGTTCTTTAGCTGATAATTTCTCTTTAGATCAATCTAGTTCTTGTGAATGATGCGGATTGCAGGGTTTCTTCTTTTTCGTCTCGCTGTTTCTTCTAGATTTTGATTTGGATGAGTTAGTGGGGATTCTATATACGGTTTCTTCTTTATTAGCAGTTAAACTTTGTACGTTTTCGGATGGATACTCACACATTAGATTCGTTTATTAAAGTTGATGTTTGATTTTGTCATTTCTACTTAGAATTAAAGTTGAGAAGATAGAATCAGACTTCATTAAAAAAAAAAAAGCTTCTTTTGTTTTGTGGATTTCTTGTTTTTACCTTTTTATCATTTGCCTTTTACAAGTGAGTGAAGTGGAAAGTGTGCATGAAGGCATCTATTGTTAAGAAGGTTAAGGTATTTAGCTTAGAGGATGGATAATTTGACT

Coding sequence (CDS)

ATGATTTTGGTGAAATATTCACTCTTATTCAATATTCAGTGTTCAATAGTCTTTTTAGGCTTTCTCGTTCTCGTTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTAATTTCCCACCGATCCGATTTTTCTCCCAAATTCACATACTTCCGATCATCTTCTCCGATTCCCAAATCCATGGCAAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACCGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACAGCTGGCCTCCGCCGCCGCCGTCCCGGCTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGAAACATGCTGAGATTCTACACTGACGATGCTCCAGGCTTAAAGATTTCTCCCACTGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGAGTTTAA

Protein sequence

MILVKYSLLFNIQCSIVFLGFLVLVFFSFLFFFFLISHRSDFSPKFTYFRSSSPIPKSMARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV

Homology

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BLAST of Cmc11g0305921 vs. NCBI nr
Match: XP_008463929.1 (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo] >KAA0035333.1 protein transport protein Sec61 subunit beta [Cucumis melo var. makuwa] >TYK14304.1 protein transport protein Sec61 subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-47
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

[Close]

BLAST of Cmc11g0305921 vs. NCBI nr
Match: XP_004149541.1 (protein transport protein Sec61 subunit beta [Cucumis sativus] >KGN47316.1 hypothetical protein Csa_023023 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 5.0e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

[Close]

BLAST of Cmc11g0305921 vs. NCBI nr
Match: XP_038902812.1 (protein transport protein Sec61 subunit beta [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 7.5e-43
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRRPGSTSA ASTGLVGGGSSGGG
Sbjct: 1   MARGVSQSQSTSS--STSRPGVVAPRGSAAATAGLRRRRPGSTSAAASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 107

[Close]

BLAST of Cmc11g0305921 vs. NCBI nr
Match: XP_022958107.1 (protein transport protein Sec61 subunit beta [Cucurbita moschata] >XP_022995532.1 protein transport protein Sec61 subunit beta [Cucurbita maxima] >XP_023534505.1 protein transport protein Sec61 subunit beta [Cucurbita pepo subsp. pepo] >KAG7013903.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.6 bits (436), Expect = 3.0e-39
Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGG
Sbjct: 1   MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 107

[Close]

BLAST of Cmc11g0305921 vs. NCBI nr
Match: XP_022140347.1 (protein transport protein Sec61 subunit beta [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 92/109 (84.40%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARG SQSQS++S  ST+RPGV APRGSAAATAGLRRRR  ST +  S G+VG GSSGGG
Sbjct: 1   MARGTSQSQSASS--STSRPGVAAPRGSAAATAGLRRRRLTSTGSAGSGGVVGAGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARS AGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSGAGV 107

[Close]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-17
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 84  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVM 143
           RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+M
Sbjct: 9   RGSAAATASMRRRKP-------TSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 144 SLCFIGFVTGLHVFGKLY 160
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

[Close]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-07
Identity = 43/94 (45.74%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 64  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRF 123
           SQSQ+ST      R    AP G+    AG  RRRP   S  + T      +      + F
Sbjct: 4   SQSQASTLVARGGRSSSNAPTGA----AGALRRRPVRGSGGSGT------TKAQQAAMNF 63

Query: 124 YTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK 158
           YTDD PG K+SP VV+ MSL FI FVT LHV GK
Sbjct: 64  YTDDTPGWKMSPVVVITMSLSFIAFVTILHVVGK 87

[Close]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 68  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDD 127
           S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D
Sbjct: 7   SGTNVGSSGRSPSKAV--AARAAGSTVRQRKNASCGTRSAGRT--TSAGTGGMWRFYTED 66

Query: 128 APGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA 162
           +PGLK+ P  VLVMSL FI  V  LH++GK  R+
Sbjct: 67  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96

[Close]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot
Match: P60468 (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 68  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDD 127
           S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D
Sbjct: 7   SGTNVGSSGRSPSKAV--AARAAGSTVRQRKNASCGTRSAGRT--TSAGTGGMWRFYTED 66

Query: 128 APGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA 162
           +PGLK+ P  VLVMSL FI  V  LH++GK  R+
Sbjct: 67  SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96

[Close]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot
Match: Q9CQS8 (Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b PE=1 SV=3)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 68  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDD 127
           S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D
Sbjct: 7   SGTNVGSSGRSPSKAV--AARAAGSTVRQRKNASCGTRSAGRT--TSAGTGGMWRFYTED 66

Query: 128 APGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA 162
           +PGLK+ P  VLVMSL FI  V  LH++GK  R+
Sbjct: 67  SPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTRS 96

[Close]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL
Match: A0A5D3CTD4 (Protein transport protein Sec61 subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00270 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.4e-48
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

[Close]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL
Match: A0A1S3CKE5 (Protein transport protein Sec61 subunit beta OS=Cucumis melo OX=3656 GN=LOC103501938 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.4e-48
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

[Close]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL
Match: A0A0A0KHR1 (Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_6G293930 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.4e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGG
Sbjct: 1   MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 109

[Close]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL
Match: A0A6J1JZ65 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491039 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGG
Sbjct: 1   MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 107

[Close]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL
Match: A0A6J1H102 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111459432 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 59  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGG 118
           MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGG
Sbjct: 1   MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSGAGTTGLVSGGSSGGG 60

Query: 119 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV 168
           NMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYRARSAAGV
Sbjct: 61  NMLRFYTDDAPGLKISPTVVLVVSLCFIGFVTGLHVFGKLYRARSAAGV 107

[Close]

BLAST of Cmc11g0305921 vs. TAIR 10
Match: AT5G60460.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 59  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG 118
           MARG+SQSQ STS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G G SG 
Sbjct: 1   MARGSSQSQQSTSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVG-SGS 60

Query: 119 GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAA 166
            NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGKLY  +S +
Sbjct: 61  SNMLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKSGS 107

[Close]

BLAST of Cmc11g0305921 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 84  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVM 143
           RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+M
Sbjct: 9   RGSAAATASMRRRKP-------TSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 144 SLCFIGFVTGLHVFGKLY 160
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

[Close]

BLAST of Cmc11g0305921 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 84  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVM 143
           RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+M
Sbjct: 9   RGSAAATASMRRRKP-------TSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 144 SLCFIGFVTGLHVFGKLY 160
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

[Close]

BLAST of Cmc11g0305921 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 84  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVM 143
           RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+M
Sbjct: 9   RGSAAATASMRRRKP-------TSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 144 SLCFIGFVTGLHVFGKLY 160
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

[Close]

BLAST of Cmc11g0305921 vs. TAIR 10
Match: AT2G45070.4 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 84  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVM 143
           RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+M
Sbjct: 9   RGSAAATASMRRRKP-------TSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 68

Query: 144 SLCFIGFVTGLHVFGKLY 160
           S+ FI FV  LHV GKLY
Sbjct: 69  SIGFIAFVAVLHVMGKLY 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0305921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463929.1	1.7e-47	100.00	PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo] >KAA00353...	[more]
XP_004149541.1	5.0e-47	99.08	protein transport protein Sec61 subunit beta [Cucumis sativus] >KGN47316.1 hypot...	[more]
XP_038902812.1	7.5e-43	93.58	protein transport protein Sec61 subunit beta [Benincasa hispida]	[more]
XP_022958107.1	3.0e-39	88.07	protein transport protein Sec61 subunit beta [Cucurbita moschata] >XP_022995532....	[more]
XP_022140347.1	1.0e-36	84.40	protein transport protein Sec61 subunit beta [Momordica charantia]	[more]

BLAST of Cmc11g0305921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38389	7.3e-17	65.38	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A8I6P9	6.9e-07	45.74	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
P60467	1.2e-06	43.62	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]
P60468	1.2e-06	43.62	Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B P...	[more]
Q9CQS8	1.2e-06	43.62	Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b ...	[more]

BLAST of Cmc11g0305921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTD4	8.4e-48	100.00	Protein transport protein Sec61 subunit beta OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CKE5	8.4e-48	100.00	Protein transport protein Sec61 subunit beta OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0KHR1	2.4e-47	99.08	Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_6...	[more]
A0A6J1JZ65	1.4e-39	88.07	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H102	1.4e-39	88.07	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cmc11g0305921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60460.1	2.9e-32	74.07	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.1	5.2e-18	65.38	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.2	5.2e-18	65.38	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.3	5.2e-18	65.38	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.4	5.2e-18	65.38	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 118..156 e-value: 2.6E-17 score: 62.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..111
None	No IPR available	PANTHER	PTHR13509:SF14	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA	coord: 59..164
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 59..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305921.1	Cmc11g0305921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005784	Sec61 translocon complex