Cmc11g0305861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr11: 27145595 .. 27146688 (-)
RNA-Seq Expression	Cmc11g0305861
Synteny	Cmc11g0305861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACAAAAAGTCTGGGTGGAAAGAAGTATGTTTTAGTTACTGTGGATGATTATTCAAGATTTACTTGGGTTCGGTTCTTGAAAGAAAAATCAGGCACTGTTAAAATTTGTATCAGTCTATGCTTGAATTTGCAACTTGAAAAAGGGAAAAAGATAATACGAATCCAAAGTGATCATGGTAAGGAGTTTGATAATGAAGATCTTAATAATTTCTGTCAATCGAAAGGTATACATCATGAATTTTCTGCTCTCATAACTTTTCAACAAAATAGAGTAGTTGAACGAAAAAATAAAACCCTACAAGAAATGGCTCGAGTCATGATACATGCCAAAAATTTACCATTGAATTTTCGGACAGAAGCTGTTAACACAGCGTGTCACGTTCATGACAGAGTTACTACTCGATCTGGAACAACTTTCACTTTATATGAACTATGGAAGGGAAGAAAGCCAAATGTAAAGTATTTTCATGTATTTAGAAGTACTTGTTATGTTCTAGCTGATAGAGAATATCATTGAAAGTGGGATGTGAAATCAGAACAAGGAATTTTCTTGGATATTCTCAAAATAGCCGAGCTTATAGAGTCTTTAATAATAAAGATGGTACAGTTATGAAAACGATCAATATTGTGGTAAATGATTTTGAATTAACTGCCATACGAATTTATGATGAGGATGATGAGACTTTAAATATGCCTGAGGATTCTTCTACGCTTTTTGTGGAGGTACCTAAAGTTGATGATCAAGTAGATGGTACTGATATAAACTCAAAAATAATATCTAAGGAAGTTATAGCTGATAACTCTGAACTGGTTCCATCTGCACATATGAGAAAGAATCATCCACCAAGTTCTATAATAGGTGATCCTTCAGCTGGAATCATTACCAGAAAAAGGGAGAAAGTAGATTACTCGAAGATGATTGCTTATTTATGTTATATCTCTGTCATTGAACCTTCAACTGATGATGTTGCTCTGAAAGATGAATATTGGATAAATGCAATGCAAAAAGAACTACTTCAATTCAGTCGTAACAATGTCTGGACATTGGTTCCCAAGCCAGAAGGAGCAAATATTATAGGTACAAAATAG

mRNA sequence

ATGCAAACAAAAAGTCTGGGTGGAAAGAAGTATGTTTTAGTTACTGTGGATGATTATTCAAGATTTACTTGGGTTCGGTTCTTGAAAGAAAAATCAGGCACTGTTAAAATTTGTATCAGTCTATGCTTGAATTTGCAACTTGAAAAAGGGAAAAAGATAATACGAATCCAAAGTGATCATGGTAAGGAGTTTGATAATGAAGATCTTAATAATTTCTGTCAATCGAAAGGTATACATCATGAATTTTCTGCTCTCATAACTTTTCAACAAAATAGAGTAGTTGAACGAAAAAATAAAACCCTACAAGAAATGGCTCGAGTCATGATACATGCCAAAAATTTACCATTGAATTTTCGGACAGAAGCTGTTAACACAGCGTGTCACGTTCATGACAGAGTTACTACTCGATCTGGAACAACTTTCACTTTATATGAACTATGGAAGGGAAGAAAGCCAAATAGAATATCATTGAAAGTGGGATGTGAAATCAGAACAAGGAATTTTCTTGGATATTCTCAAAATAGCCGAGCTTATAGAGTCTTTAATAATAAAGATGGTACAGTTATGAAAACGATCAATATTGTGGTAAATGATTTTGAATTAACTGCCATACGAATTTATGATGAGGATGATGAGACTTTAAATATGCCTGAGGATTCTTCTACGCTTTTTGTGGAGGTACCTAAAGTTGATGATCAAGTAGATGGTACTGATATAAACTCAAAAATAATATCTAAGGAAGTTATAGCTGATAACTCTGAACTGGTTCCATCTGCACATATGAGAAAGAATCATCCACCAAGTTCTATAATAGGTGATCCTTCAGCTGGAATCATTACCAGAAAAAGGGAGAAAGTAGATTACTCGAAGATGATTGCTTATTTATGTTATATCTCTGTCATTGAACCTTCAACTGATGATGTTGCTCTGAAAGATGAATATTGGATAAATGCAATGCAAAAAGAACTACTTCAATTCAGTCGTAACAATGTCTGGACATTGGTTCCCAAGCCAGAAGGAGCAAATATTATAGGTACAAAATAG

Coding sequence (CDS)

ATGCAAACAAAAAGTCTGGGTGGAAAGAAGTATGTTTTAGTTACTGTGGATGATTATTCAAGATTTACTTGGGTTCGGTTCTTGAAAGAAAAATCAGGCACTGTTAAAATTTGTATCAGTCTATGCTTGAATTTGCAACTTGAAAAAGGGAAAAAGATAATACGAATCCAAAGTGATCATGGTAAGGAGTTTGATAATGAAGATCTTAATAATTTCTGTCAATCGAAAGGTATACATCATGAATTTTCTGCTCTCATAACTTTTCAACAAAATAGAGTAGTTGAACGAAAAAATAAAACCCTACAAGAAATGGCTCGAGTCATGATACATGCCAAAAATTTACCATTGAATTTTCGGACAGAAGCTGTTAACACAGCGTGTCACGTTCATGACAGAGTTACTACTCGATCTGGAACAACTTTCACTTTATATGAACTATGGAAGGGAAGAAAGCCAAATAGAATATCATTGAAAGTGGGATGTGAAATCAGAACAAGGAATTTTCTTGGATATTCTCAAAATAGCCGAGCTTATAGAGTCTTTAATAATAAAGATGGTACAGTTATGAAAACGATCAATATTGTGGTAAATGATTTTGAATTAACTGCCATACGAATTTATGATGAGGATGATGAGACTTTAAATATGCCTGAGGATTCTTCTACGCTTTTTGTGGAGGTACCTAAAGTTGATGATCAAGTAGATGGTACTGATATAAACTCAAAAATAATATCTAAGGAAGTTATAGCTGATAACTCTGAACTGGTTCCATCTGCACATATGAGAAAGAATCATCCACCAAGTTCTATAATAGGTGATCCTTCAGCTGGAATCATTACCAGAAAAAGGGAGAAAGTAGATTACTCGAAGATGATTGCTTATTTATGTTATATCTCTGTCATTGAACCTTCAACTGATGATGTTGCTCTGAAAGATGAATATTGGATAAATGCAATGCAAAAAGAACTACTTCAATTCAGTCGTAACAATGTCTGGACATTGGTTCCCAAGCCAGAAGGAGCAAATATTATAGGTACAAAATAG

Protein sequence

MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYSKMIAYLCYISVIEPSTDDVALKDEYWINAMQKELLQFSRNNVWTLVPKPEGANIIGTK

Homology

[Close]

BLAST of Cmc11g0305861 vs. NCBI nr
Match: KAA0064117.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28621.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 5.4e-120
Identity = 232/348 (66.67%), Postives = 261/348 (75.00%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           M+T+SLG KKYVLV VDDYSRFTWV+F K KS TV+ICI LCLNLQ EKGKKIIRI SDH
Sbjct: 122 MKTESLGEKKYVLVVVDDYSRFTWVQFFKGKSDTVQICIRLCLNLQREKGKKIIRIYSDH 181

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
            KEFDNEDLNNF Q + IHHEFSA   F +   VERKN+TLQEMARVMIH KNLPL+F  
Sbjct: 182 AKEFDNEDLNNFYQIERIHHEFSAPKLFSKMESVERKNRTLQEMARVMIHPKNLPLHFLA 241

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEI 180
           EA+NTACH+H+R+TTRSG T TLYELW GRK N                     K   ++
Sbjct: 242 EAINTACHIHNRITTRSGMTVTLYELWNGRKLNVKYFHVFGNTCYILADREYHRKWDVKL 301

Query: 181 RTRNFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTL 240
               FL YS NS AYRVFN K G VM+TIN+VVNDFE T  +I DEDDET+N+P D+S  
Sbjct: 302 EQGIFLEYSHNSCAYRVFNIKSGIVMETINVVVNDFESTDNQINDEDDETVNIPVDNSLC 361

Query: 241 FVEVPKVDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKR 300
            VEVPK D  +DG+ INS+ ISKEVIADN E VPS H++KNHP SSIIGDP A IIT+K+
Sbjct: 362 SVEVPKADALIDGSGINSEKISKEVIADNLEFVPSTHVKKNHPSSSIIGDPPAKIITQKK 421

Query: 301 EKVDYSKMIAYLCYISVIEPSTDDVALKDEYWINAMQKELLQFSRNNV 332
           EKVDY KMIA LCY   I+PST DVALKDEYWIN MQ+ELLQF RNNV
Sbjct: 422 EKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEELLQFMRNNV 469

[Close]

BLAST of Cmc11g0305861 vs. NCBI nr
Match: KAA0048744.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 424.5 bits (1090), Expect = 9.0e-115
Identity = 224/328 (68.29%), Postives = 244/328 (74.39%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           +QT+SLGGKKYVLV VDDYSRFTWVRFLKEKS TVKICISLCLNLQ EKGK+IIRI+SDH
Sbjct: 4   LQTESLGGKKYVLVAVDDYSRFTWVRFLKEKSDTVKICISLCLNLQCEKGKRIIRIRSDH 63

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
           GKEFDNEDLN+FCQ +GI+HEFS  IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  
Sbjct: 64  GKEFDNEDLNSFCQLEGIYHEFSNPITLQQNGVVERKNRTLQEMARVMIHAKNLPLNFWV 123

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGYSQNSRAYRV 180
           EA++TACH+H+R+TTRSG   TLYE WKGRKPN I            FLGYSQNSRAY+V
Sbjct: 124 EAIDTACHIHNRITTRSGMVVTLYEHWKGRKPNGI------------FLGYSQNSRAYKV 183

Query: 181 FNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDIN 240
           FNN+ GTVMKTIN VVNDFE TA R YDEDDETLNM  DSST  +EVPK D Q D  DI 
Sbjct: 184 FNNRSGTVMKTINTVVNDFEPTAKRTYDEDDETLNMHVDSSTFPIEVPKADAQADDIDIQ 243

Query: 241 SKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYSKMIAYLCYISV 300
            + + K                                   K+EKVDYSKMIA LCY S 
Sbjct: 244 KRYLRK-----------------------------------KKEKVDYSKMIAGLCYTSA 284

Query: 301 IEPSTDDVALKDEYWINAMQKELLQFSR 329
           IEPST DVALKDEYWINAMQ+ELLQFSR
Sbjct: 304 IEPSTVDVALKDEYWINAMQEELLQFSR 284

[Close]

BLAST of Cmc11g0305861 vs. NCBI nr
Match: KAA0060126.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 419.9 bits (1078), Expect = 2.2e-113
Identity = 221/335 (65.97%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 7   GGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDN 66
           GG+KYVLV VDDYSRFTWVRFLK K  T K+CI+LCLNLQ EK +KIIRI+ +HG EF+N
Sbjct: 503 GGEKYVLVVVDDYSRFTWVRFLKGKLDTGKLCINLCLNLQREKSQKIIRIRCNHGNEFEN 562

Query: 67  EDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVNTA 126
           EDLNNFCQ++GIHHEF+A IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  EAVNTA
Sbjct: 563 EDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTA 622

Query: 127 CHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEIRTRNFL 186
           CH+HDRVTTRSGTT TLYELWKGRKPN                 +   K   +     FL
Sbjct: 623 CHIHDRVTTRSGTTVTLYELWKGRKPNIKYFHIFGSICYILADRKYHRKWDVKSDQEIFL 682

Query: 187 GYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPK 246
           GYSQNSRAYRVFN K GTVM+TIN+VVNDFE    +   E+DET   PE +ST   E+ K
Sbjct: 683 GYSQNSRAYRVFNIKSGTVMETINVVVNDFESNINQFNIENDETHVTPEVTSTPLDEMSK 742

Query: 247 VDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYS 306
            + Q+D     S  I+ EVI + + LVPSAH++KNHP SS+IGDPSAGI TR++EKVDY+
Sbjct: 743 GESQLDSAKTYSS-ITDEVINNETVLVPSAHVKKNHPLSSLIGDPSAGITTRRKEKVDYT 802

Query: 307 KMIAYLCYISVIEPSTDDVALKDEYWINAMQKELL 325
           KMIA LCY+S IEP++ + ALKDEYWINAMQKELL
Sbjct: 803 KMIADLCYVSAIEPTSVENALKDEYWINAMQKELL 836

[Close]

BLAST of Cmc11g0305861 vs. NCBI nr
Match: KAA0036855.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ95919.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-107
Identity = 215/331 (64.95%), Postives = 243/331 (73.41%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           MQT+SLGGKKYVLV VDDYS+FTWVRFLKEK  TVK+CISLCLNLQ EKG+KIIRI+SDH
Sbjct: 321 MQTESLGGKKYVLVVVDDYSKFTWVRFLKEKFDTVKLCISLCLNLQREKGQKIIRIRSDH 380

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
           GKEFDNEDLNN CQ++GIHHEF+A IT QQN VVERKN+ LQEMARVMIHAKN PLNF  
Sbjct: 381 GKEFDNEDLNNLCQTEGIHHEFAAPITPQQNGVVERKNRMLQEMARVMIHAKNFPLNFWA 440

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEI 180
           E VNTACH+H RVTTR GTT TLYELWKGRKPN                     K   + 
Sbjct: 441 EVVNTACHIHKRVTTRFGTTITLYELWKGRKPNVKYFHIFGSTCYILADREYHRKWDVKS 500

Query: 181 RTRNFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTL 240
               FL YSQNSRAYRVFN K GTVM+ IN+VVNDFE    +   EDDET   P+ + T 
Sbjct: 501 NQGIFLSYSQNSRAYRVFNIKSGTVMEKINVVVNDFESNVNQFNFEDDETYVTPDVTFTP 560

Query: 241 FVEVPKVDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKR 300
             E+PK D Q +    NS  I+ EVI + + + PSAH++KNHP SSIIGD SAGI TR++
Sbjct: 561 LDEMPKGDLQPNSAKANSN-ITDEVINNETVVFPSAHVKKNHPSSSIIGDLSAGITTRRK 620

Query: 301 EKVDYSKMIAYLCYISVIEPSTDDVALKDEY 315
           EKVDY KMIA LCY S IEP + + ALKDEY
Sbjct: 621 EKVDYMKMIADLCYESAIEPISVENALKDEY 650

[Close]

BLAST of Cmc11g0305861 vs. NCBI nr
Match: TYK08439.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-106
Identity = 214/322 (66.46%), Postives = 245/322 (76.09%), Query Frame = 0


Query: 5   SLG--GKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGK 64
           SLG  G+KYVLV VDDYSRFTWVRFLK K  T K+CISLCLNLQ EKG+KIIRI+ +HG 
Sbjct: 84  SLGGWGEKYVLVVVDDYSRFTWVRFLKGKLDTGKLCISLCLNLQREKGQKIIRIRCNHGN 143

Query: 65  EFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEA 124
           EF+NEDLNNFCQ++GIHHEF+A IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  EA
Sbjct: 144 EFENEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEA 203

Query: 125 VNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGYSQNSRAYRVFN 184
           VNTACH+HDRVTTRSGTT TLYELWKGRKPN                         +VFN
Sbjct: 204 VNTACHIHDRVTTRSGTTVTLYELWKGRKPN------------------------IKVFN 263

Query: 185 NKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDINSK 244
            K GTVM+TIN+VVNDFE    +   EDDET    E +ST   E+ K + Q+D     S 
Sbjct: 264 IKSGTVMETINVVVNDFESNINQFNIEDDETHVTSEVTSTPLDEMSKGELQLDSAKTYSS 323

Query: 245 IISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYSKMIAYLCYISVIE 304
            I+ EVI + + LVPSAH++KNHP SSIIGDPSAGI TR++EKVDY+KMIA LCY+SVIE
Sbjct: 324 -ITDEVINNETVLVPSAHVKKNHPLSSIIGDPSAGITTRRKEKVDYTKMIADLCYVSVIE 380

Query: 305 PSTDDVALKDEYWINAMQKELL 325
           P++ + ALKDEYWINAMQKELL
Sbjct: 384 PTSVENALKDEYWINAMQKELL 380

[Close]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.8e-23
Identity = 92/369 (24.93%), Postives = 161/369 (43.63%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           M+ +S+GG KY +  +DD SR  WV  LK K    ++       ++ E G+K+ R++SD+
Sbjct: 492 MEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDN 551

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
           G E+ + +   +C S GI HE +   T Q N V ER N+T+ E  R M+    LP +F  
Sbjct: 552 GGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWG 611

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKV-GC--------EIRTR----- 180
           EAV TAC++ +R  +          +W  ++ +   LKV GC        E RT+     
Sbjct: 612 EAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKS 671

Query: 181 ---NFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTL 240
               F+GY      YR+++     V+++ ++V  + E+       E  +   +P      
Sbjct: 672 IPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPN----- 731

Query: 241 FVEVPKVDDQVDGTDINSKIISKE-----VIADNSELVPSAHMRKNHPPSSIIGDPSAGI 300
           FV +P   +     +  +  +S++      + +  E +        HP     G+     
Sbjct: 732 FVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQ---GEEQHQP 791

Query: 301 ITRKREKVDYSKMIAYLCYISVIEPSTDDVALKD-------EYWINAMQKELLQFSRNNV 341
           + R       S+      Y+ +I    +  +LK+          + AMQ+E+    +N  
Sbjct: 792 LRRSERPRVESRRYPSTEYV-LISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGT 851

[Close]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 2.7e-13
Identity = 61/255 (23.92%), Postives = 115/255 (45.10%), Query Frame = 0


Query: 5   SLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEF 64
           +L  K Y ++ VD ++ +     +K KS    +        +     K++ +  D+G+E+
Sbjct: 496 TLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREY 555

Query: 65  DNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVN 124
            + ++  FC  KGI +  +   T Q N V ER  +T+ E AR M+    L  +F  EAV 
Sbjct: 556 LSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVL 615

Query: 125 TACHVHDRVTTRS--GTTFTLYELWKGRKPNRISLKV---GCEIRTRNFLGYSQNSRAYR 184
           TA ++ +R+ +R+   ++ T YE+W  +KP    L+V      +  +N  G   +     
Sbjct: 616 TATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKS 675

Query: 185 VFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDI 244
           +F   +    K  + V   F +    + DE +   +      T+F++  K  +  +  + 
Sbjct: 676 IFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPND 735

Query: 245 NSKIISKEVIADNSE 255
           + KII  E   ++ E
Sbjct: 736 SRKIIQTEFPNESKE 750

[Close]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot
Match: Q12337 (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 60/268 (22.39%), Postives = 110/268 (41.04%), Query Frame = 0


Query: 11  YVLVTVDDYSRFTWVRFL--KEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDNED 70
           Y +   D+ +RF WV  L  + +   + +  S+   ++ +   +++ IQ D G E+ N+ 
Sbjct: 682 YFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKT 741

Query: 71  LNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLP-------LNFRTE 130
           L+ F  ++GI   ++     + + V ER N+TL    R ++H   LP       + F T 
Sbjct: 742 LHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTI 801

Query: 131 AVNTACHVHDRVTTR-----SGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGY----S 190
             N+      R + R     +G   T   L  G+     +     +I  R   GY    S
Sbjct: 802 IRNSLVSPKKRKSARQHAGLAGLDITTI-LPFGQPVIVNNHNPDSKIHPRGIPGYALHPS 861

Query: 191 QNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDED----DETLNMPEDSSTLFVEVP 250
           +NS  Y ++       + T N V+   + T +  +D D    D+ LN     +  F+E  
Sbjct: 862 RNSYGYIIYLPSLKKTVDTTNYVILQNKQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQN 921

Query: 251 KVDDQVDGTDINSKIISKEVIADNSELV 257
           + +   D    +      E+  ++  LV
Sbjct: 922 ETEQSYDQNTESDHDYQSEIEINSDPLV 948

[Close]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot
Match: P0C2J5 (Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-LR2 PE=5 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 55/267 (20.60%), Postives = 105/267 (39.33%), Query Frame = 0


Query: 11  YVLVTVDDYSRFTWVRFL--KEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDNED 70
           Y +   D+ +RF WV  L  + +   + +  S+   ++ +   +++ IQ D G E+ N+ 
Sbjct: 682 YFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKT 741

Query: 71  LNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVNTACH 130
           L+ F  ++GI   ++     + + V ER N+TL    R ++H   LP +    AV  +  
Sbjct: 742 LHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTI 801

Query: 131 VHDRVTTRSGTTFTLYELWKGRKPNRISLKVG-----------CEIRTRNFLGY----SQ 190
           + + + +                     L  G            +I  R   GY    S+
Sbjct: 802 IRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSR 861

Query: 191 NSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDED----DETLNMPEDSSTLFVEVPK 250
           NS  Y ++       + T N V+   + T +  +D D    D+ LN     +  F+E  +
Sbjct: 862 NSYGYIIYLPSLKKTVDTTNYVILQNKQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQNE 921

Query: 251 VDDQVDGTDINSKIISKEVIADNSELV 257
            +   D    +      E+  ++  LV
Sbjct: 922 TEQSYDQNKESDHDYQSEIEINSDPLV 948

[Close]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot
Match: Q12113 (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 55/267 (20.60%), Postives = 105/267 (39.33%), Query Frame = 0


Query: 11  YVLVTVDDYSRFTWVRFL--KEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDNED 70
           Y +   D+ +RF WV  L  + +   + +  S+   ++ +   +++ IQ D G E+ N+ 
Sbjct: 682 YFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKT 741

Query: 71  LNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVNTACH 130
           L+ F  ++GI   ++     + + V ER N+TL    R ++H   LP +    AV  +  
Sbjct: 742 LHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTI 801

Query: 131 VHDRVTTRSGTTFTLYELWKGRKPNRISLKVG-----------CEIRTRNFLGY----SQ 190
           + + + +                     L  G            +I  R   GY    S+
Sbjct: 802 IRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSR 861

Query: 191 NSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDED----DETLNMPEDSSTLFVEVPK 250
           NS  Y ++       + T N V+   + T +  +D D    D+ LN     +  F+E  +
Sbjct: 862 NSYGYIIYLPSLKKTVDTTNYVILQNKQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQNE 921

Query: 251 VDDQVDGTDINSKIISKEVIADNSELV 257
            +   D    +      E+  ++  LV
Sbjct: 922 TEQSYDQNTESDHDYQSEIEINSDPLV 948

[Close]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL
Match: A0A5A7VAS8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00390 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.6e-120
Identity = 232/348 (66.67%), Postives = 261/348 (75.00%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           M+T+SLG KKYVLV VDDYSRFTWV+F K KS TV+ICI LCLNLQ EKGKKIIRI SDH
Sbjct: 122 MKTESLGEKKYVLVVVDDYSRFTWVQFFKGKSDTVQICIRLCLNLQREKGKKIIRIYSDH 181

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
            KEFDNEDLNNF Q + IHHEFSA   F +   VERKN+TLQEMARVMIH KNLPL+F  
Sbjct: 182 AKEFDNEDLNNFYQIERIHHEFSAPKLFSKMESVERKNRTLQEMARVMIHPKNLPLHFLA 241

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEI 180
           EA+NTACH+H+R+TTRSG T TLYELW GRK N                     K   ++
Sbjct: 242 EAINTACHIHNRITTRSGMTVTLYELWNGRKLNVKYFHVFGNTCYILADREYHRKWDVKL 301

Query: 181 RTRNFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTL 240
               FL YS NS AYRVFN K G VM+TIN+VVNDFE T  +I DEDDET+N+P D+S  
Sbjct: 302 EQGIFLEYSHNSCAYRVFNIKSGIVMETINVVVNDFESTDNQINDEDDETVNIPVDNSLC 361

Query: 241 FVEVPKVDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKR 300
            VEVPK D  +DG+ INS+ ISKEVIADN E VPS H++KNHP SSIIGDP A IIT+K+
Sbjct: 362 SVEVPKADALIDGSGINSEKISKEVIADNLEFVPSTHVKKNHPSSSIIGDPPAKIITQKK 421

Query: 301 EKVDYSKMIAYLCYISVIEPSTDDVALKDEYWINAMQKELLQFSRNNV 332
           EKVDY KMIA LCY   I+PST DVALKDEYWIN MQ+ELLQF RNNV
Sbjct: 422 EKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEELLQFMRNNV 469

[Close]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL
Match: A0A5A7U0C5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43G00450 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 4.3e-115
Identity = 224/328 (68.29%), Postives = 244/328 (74.39%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           +QT+SLGGKKYVLV VDDYSRFTWVRFLKEKS TVKICISLCLNLQ EKGK+IIRI+SDH
Sbjct: 4   LQTESLGGKKYVLVAVDDYSRFTWVRFLKEKSDTVKICISLCLNLQCEKGKRIIRIRSDH 63

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
           GKEFDNEDLN+FCQ +GI+HEFS  IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  
Sbjct: 64  GKEFDNEDLNSFCQLEGIYHEFSNPITLQQNGVVERKNRTLQEMARVMIHAKNLPLNFWV 123

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGYSQNSRAYRV 180
           EA++TACH+H+R+TTRSG   TLYE WKGRKPN I            FLGYSQNSRAY+V
Sbjct: 124 EAIDTACHIHNRITTRSGMVVTLYEHWKGRKPNGI------------FLGYSQNSRAYKV 183

Query: 181 FNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDIN 240
           FNN+ GTVMKTIN VVNDFE TA R YDEDDETLNM  DSST  +EVPK D Q D  DI 
Sbjct: 184 FNNRSGTVMKTINTVVNDFEPTAKRTYDEDDETLNMHVDSSTFPIEVPKADAQADDIDIQ 243

Query: 241 SKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYSKMIAYLCYISV 300
            + + K                                   K+EKVDYSKMIA LCY S 
Sbjct: 244 KRYLRK-----------------------------------KKEKVDYSKMIAGLCYTSA 284

Query: 301 IEPSTDDVALKDEYWINAMQKELLQFSR 329
           IEPST DVALKDEYWINAMQ+ELLQFSR
Sbjct: 304 IEPSTVDVALKDEYWINAMQEELLQFSR 284

[Close]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL
Match: A0A5A7V0X1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00460 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 1.1e-113
Identity = 221/335 (65.97%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 7   GGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGKEFDN 66
           GG+KYVLV VDDYSRFTWVRFLK K  T K+CI+LCLNLQ EK +KIIRI+ +HG EF+N
Sbjct: 503 GGEKYVLVVVDDYSRFTWVRFLKGKLDTGKLCINLCLNLQREKSQKIIRIRCNHGNEFEN 562

Query: 67  EDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEAVNTA 126
           EDLNNFCQ++GIHHEF+A IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  EAVNTA
Sbjct: 563 EDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEAVNTA 622

Query: 127 CHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEIRTRNFL 186
           CH+HDRVTTRSGTT TLYELWKGRKPN                 +   K   +     FL
Sbjct: 623 CHIHDRVTTRSGTTVTLYELWKGRKPNIKYFHIFGSICYILADRKYHRKWDVKSDQEIFL 682

Query: 187 GYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPK 246
           GYSQNSRAYRVFN K GTVM+TIN+VVNDFE    +   E+DET   PE +ST   E+ K
Sbjct: 683 GYSQNSRAYRVFNIKSGTVMETINVVVNDFESNINQFNIENDETHVTPEVTSTPLDEMSK 742

Query: 247 VDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYS 306
            + Q+D     S  I+ EVI + + LVPSAH++KNHP SS+IGDPSAGI TR++EKVDY+
Sbjct: 743 GESQLDSAKTYSS-ITDEVINNETVLVPSAHVKKNHPLSSLIGDPSAGITTRRKEKVDYT 802

Query: 307 KMIAYLCYISVIEPSTDDVALKDEYWINAMQKELL 325
           KMIA LCY+S IEP++ + ALKDEYWINAMQKELL
Sbjct: 803 KMIADLCYVSAIEPTSVENALKDEYWINAMQKELL 836

[Close]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL
Match: A0A5D3BA69 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002290 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 5.1e-108
Identity = 215/331 (64.95%), Postives = 243/331 (73.41%), Query Frame = 0


Query: 1   MQTKSLGGKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDH 60
           MQT+SLGGKKYVLV VDDYS+FTWVRFLKEK  TVK+CISLCLNLQ EKG+KIIRI+SDH
Sbjct: 321 MQTESLGGKKYVLVVVDDYSKFTWVRFLKEKFDTVKLCISLCLNLQREKGQKIIRIRSDH 380

Query: 61  GKEFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRT 120
           GKEFDNEDLNN CQ++GIHHEF+A IT QQN VVERKN+ LQEMARVMIHAKN PLNF  
Sbjct: 381 GKEFDNEDLNNLCQTEGIHHEFAAPITPQQNGVVERKNRMLQEMARVMIHAKNFPLNFWA 440

Query: 121 EAVNTACHVHDRVTTRSGTTFTLYELWKGRKPN-----------------RISLKVGCEI 180
           E VNTACH+H RVTTR GTT TLYELWKGRKPN                     K   + 
Sbjct: 441 EVVNTACHIHKRVTTRFGTTITLYELWKGRKPNVKYFHIFGSTCYILADREYHRKWDVKS 500

Query: 181 RTRNFLGYSQNSRAYRVFNNKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTL 240
               FL YSQNSRAYRVFN K GTVM+ IN+VVNDFE    +   EDDET   P+ + T 
Sbjct: 501 NQGIFLSYSQNSRAYRVFNIKSGTVMEKINVVVNDFESNVNQFNFEDDETYVTPDVTFTP 560

Query: 241 FVEVPKVDDQVDGTDINSKIISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKR 300
             E+PK D Q +    NS  I+ EVI + + + PSAH++KNHP SSIIGD SAGI TR++
Sbjct: 561 LDEMPKGDLQPNSAKANSN-ITDEVINNETVVFPSAHVKKNHPSSSIIGDLSAGITTRRK 620

Query: 301 EKVDYSKMIAYLCYISVIEPSTDDVALKDEY 315
           EKVDY KMIA LCY S IEP + + ALKDEY
Sbjct: 621 EKVDYMKMIADLCYESAIEPISVENALKDEY 650

[Close]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL
Match: A0A5D3CDL4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00550 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 5.7e-107
Identity = 214/322 (66.46%), Postives = 245/322 (76.09%), Query Frame = 0


Query: 5   SLG--GKKYVLVTVDDYSRFTWVRFLKEKSGTVKICISLCLNLQLEKGKKIIRIQSDHGK 64
           SLG  G+KYVLV VDDYSRFTWVRFLK K  T K+CISLCLNLQ EKG+KIIRI+ +HG 
Sbjct: 84  SLGGWGEKYVLVVVDDYSRFTWVRFLKGKLDTGKLCISLCLNLQREKGQKIIRIRCNHGN 143

Query: 65  EFDNEDLNNFCQSKGIHHEFSALITFQQNRVVERKNKTLQEMARVMIHAKNLPLNFRTEA 124
           EF+NEDLNNFCQ++GIHHEF+A IT QQN VVERKN+TLQEMARVMIHAKNLPLNF  EA
Sbjct: 144 EFENEDLNNFCQTEGIHHEFAAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLNFWAEA 203

Query: 125 VNTACHVHDRVTTRSGTTFTLYELWKGRKPNRISLKVGCEIRTRNFLGYSQNSRAYRVFN 184
           VNTACH+HDRVTTRSGTT TLYELWKGRKPN                         +VFN
Sbjct: 204 VNTACHIHDRVTTRSGTTVTLYELWKGRKPN------------------------IKVFN 263

Query: 185 NKDGTVMKTINIVVNDFELTAIRIYDEDDETLNMPEDSSTLFVEVPKVDDQVDGTDINSK 244
            K GTVM+TIN+VVNDFE    +   EDDET    E +ST   E+ K + Q+D     S 
Sbjct: 264 IKSGTVMETINVVVNDFESNINQFNIEDDETHVTSEVTSTPLDEMSKGELQLDSAKTYSS 323

Query: 245 IISKEVIADNSELVPSAHMRKNHPPSSIIGDPSAGIITRKREKVDYSKMIAYLCYISVIE 304
            I+ EVI + + LVPSAH++KNHP SSIIGDPSAGI TR++EKVDY+KMIA LCY+SVIE
Sbjct: 324 -ITDEVINNETVLVPSAHVKKNHPLSSIIGDPSAGITTRRKEKVDYTKMIADLCYVSVIE 380

Query: 305 PSTDDVALKDEYWINAMQKELL 325
           P++ + ALKDEYWINAMQKELL
Sbjct: 384 PTSVENALKDEYWINAMQKELL 380

The following BLAST results are available for this feature:

BLAST of Cmc11g0305861 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064117.1	5.4e-120	66.67	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28621.1 gag-pol polyprotein [...	[more]
KAA0048744.1	9.0e-115	68.29	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0060126.1	2.2e-113	65.97	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0036855.1	1.1e-107	64.95	gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ95919.1 gag-pol polyprotein [...	[more]
TYK08439.1	1.2e-106	66.46	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0305861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.8e-23	24.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.7e-13	23.92	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12337	1.2e-05	22.39	Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
P0C2J5	1.6e-05	20.60	Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
Q12113	1.6e-05	20.60	Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAS8	2.6e-120	66.67	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030...	[more]
A0A5A7U0C5	4.3e-115	68.29	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43G0...	[more]
A0A5A7V0X1	1.1e-113	65.97	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G0...	[more]
A0A5D3BA69	5.1e-108	64.95	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G...	[more]
A0A5D3CDL4	5.7e-107	66.46	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G...	[more]

BLAST of Cmc11g0305861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..175 e-value: 2.9E-31 score: 110.3
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 7..84 e-value: 2.5E-10 score: 40.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 15.693575
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 7..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305861.1	Cmc11g0305861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding