Cmc11g0305341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Location	CMiso1.1chr11: 26678859 .. 26679512 (+)
RNA-Seq Expression	Cmc11g0305341
Synteny	Cmc11g0305341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTAGAGTGTGATGGGAGTTGTGAAGCTTCAAAAATCGTAAGGGACGAAGATACGGATGGCAAGCGTAAAACCATTGATGTTGACCTTGATTCATATGGGAGAGAAGATGTTCCAAATCCCCCAAAAATAAGGAAGAATGTCAAACAATCAATGGTTTGGGACCACTTTGAGAGGCTTAATGGTGATCCTAATGACCCTCGTGCTAAATATAAATATTGTGGAGTTGTTTATGCATGTCATTCTAAACGTAATGGTACTGGAACTATGAAGCATCATTTAGAAAATTGCAAAAAGTACCCTTACCAAAAAAAGAGAGACCAAACTCAAATGACATTAGCTTTTAAACCTAAAGACAAAGTTGGAGATAATTCTTCACAACTTGTATGTGAATCATTTAGTTTAGATGGTTGTCGGGATGCTTTGGTTGAGATGATAATAGTTGATGAATTGCCCTTTAAGTTTGTGGAGGGTAAGGCATTTAAAAAGTTTGTGGATAAATTAACATGTGGAAATCATACTAGATTTGTTGTTCCATCTCGATTTACTGTGGCTAGAGATGTGCTTAAGTTGTATGTTAATGAGAAGAATTGTTTGAGAGACATGTTTGTAAAAAATAAGTATAGAGTTTCTCTTACCACTGATTGTTGA

mRNA sequence

ATGGAGTTAGAGTGTGATGGGAGTTGTGAAGCTTCAAAAATCGTAAGGGACGAAGATACGGATGGCAAGCGTAAAACCATTGATGTTGACCTTGATTCATATGGGAGAGAAGATGTTCCAAATCCCCCAAAAATAAGGAAGAATGTCAAACAATCAATGGTTTGGGACCACTTTGAGAGGCTTAATGGTGATCCTAATGACCCTCGTGCTAAATATAAATATTGTGGAGTTGTTTATGCATGTCATTCTAAACGTAATGGTACTGGAACTATGAAGCATCATTTAGAAAATTGCAAAAAGTACCCTTACCAAAAAAAGAGAGACCAAACTCAAATGACATTAGCTTTTAAACCTAAAGACAAAGTTGGAGATAATTCTTCACAACTTGTATGTGAATCATTTAGTTTAGATGGTTGTCGGGATGCTTTGGTTGAGATGATAATAGTTGATGAATTGCCCTTTAAGTTTGTGGAGGGTAAGGCATTTAAAAAGTTTGTGGATAAATTAACATGTGGAAATCATACTAGATTTGTTGTTCCATCTCGATTTACTGTGGCTAGAGATGTGCTTAAGTTGTATGTTAATGAGAAGAATTGTTTGAGAGACATGTTTGTAAAAAATAAGTATAGAGTTTCTCTTACCACTGATTGTTGA

Coding sequence (CDS)

ATGGAGTTAGAGTGTGATGGGAGTTGTGAAGCTTCAAAAATCGTAAGGGACGAAGATACGGATGGCAAGCGTAAAACCATTGATGTTGACCTTGATTCATATGGGAGAGAAGATGTTCCAAATCCCCCAAAAATAAGGAAGAATGTCAAACAATCAATGGTTTGGGACCACTTTGAGAGGCTTAATGGTGATCCTAATGACCCTCGTGCTAAATATAAATATTGTGGAGTTGTTTATGCATGTCATTCTAAACGTAATGGTACTGGAACTATGAAGCATCATTTAGAAAATTGCAAAAAGTACCCTTACCAAAAAAAGAGAGACCAAACTCAAATGACATTAGCTTTTAAACCTAAAGACAAAGTTGGAGATAATTCTTCACAACTTGTATGTGAATCATTTAGTTTAGATGGTTGTCGGGATGCTTTGGTTGAGATGATAATAGTTGATGAATTGCCCTTTAAGTTTGTGGAGGGTAAGGCATTTAAAAAGTTTGTGGATAAATTAACATGTGGAAATCATACTAGATTTGTTGTTCCATCTCGATTTACTGTGGCTAGAGATGTGCTTAAGTTGTATGTTAATGAGAAGAATTGTTTGAGAGACATGTTTGTAAAAAATAAGTATAGAGTTTCTCTTACCACTGATTGTTGA

Protein sequence

MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFERLNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC

Homology

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BLAST of Cmc11g0305341 vs. NCBI nr
Match: TYK14363.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 445.7 bits (1145), Expect = 2.3e-121
Identity = 213/217 (98.16%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

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BLAST of Cmc11g0305341 vs. NCBI nr
Match: KAA0033275.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 443.7 bits (1140), Expect = 8.9e-121
Identity = 212/217 (97.70%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGK KTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKHKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

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BLAST of Cmc11g0305341 vs. NCBI nr
Match: TYK09690.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 443.7 bits (1140), Expect = 8.9e-121
Identity = 212/217 (97.70%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTT+C
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTNC 222

[Close]

BLAST of Cmc11g0305341 vs. NCBI nr
Match: KAA0025770.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 439.1 bits (1128), Expect = 2.2e-119
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDT+ KRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTNDKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVY CHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYECHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

[Close]

BLAST of Cmc11g0305341 vs. NCBI nr
Match: KAA0040955.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 438.7 bits (1127), Expect = 2.9e-119
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDG+CEASKIVRDEDTDGK KTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGTCEASKIVRDEDTDGKCKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDV KLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVPKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

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BLAST of Cmc11g0305341 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 52/189 (27.51%), Postives = 78/189 (41.27%), Query Frame = 0


Query: 40  PNPPKIRKNVKQSMVWDHFERLNGDPNDPRAKYKYC--GVVYACHSKRNGTGTMKHHL-- 99
           P    I++  K+SMVW+HF     +PN  RA  K C     Y+  +K  GT  +K H+  
Sbjct: 56  PETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIFK 115

Query: 100 ENCKKYPYQKKRDQTQ-MTLAFKPKD-------KVGDNSSQLVCESFSLDGCRDALVEMI 159
             C    +    D    M+  + PK        +  +N+S  V  +F+ D CR  + +MI
Sbjct: 116 GTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYV--AFNQDKCRQEIAKMI 175

Query: 160 IVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNCLRDMFVKN 217
           I+ + P   V+   F  FV  +       F   S   V  D +  Y+ EK  +       
Sbjct: 176 IMHDYPLHMVQHPGFVSFVQSI----QPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGI 235

[Close]

BLAST of Cmc11g0305341 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.0e-07
Identity = 54/202 (26.73%), Postives = 84/202 (41.58%), Query Frame = 0


Query: 28  DVDLDSYGREDVPNPPKIRKNVKQSMVWDHF--ERLNGDPNDPRAKYKYC--GVVYACHS 87
           +V ++     ++  PP  R+  K+S+VW+HF  E ++G     RA  K C     Y+  S
Sbjct: 45  EVQVNGLVSAEMSTPPTSRRRRKKSLVWEHFTIEAVSGGAT--RACCKLCKQTFAYSSGS 104

Query: 88  KRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCE----------- 147
           K  GT  +K H+      P  K ++           D  G+ + +   +           
Sbjct: 105 KIAGTSHLKRHI-TLGSCPIIKNQEHKLALTPAVGTDNDGEGTVERPSKRRYRYTGYANA 164

Query: 148 SFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVPSRFTVARDVLKL 207
           +F  D     L +MII+ + P   V+  AF  F+D L      RF V    T+  +V  +
Sbjct: 165 AFDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSL----QPRFRVVDVETMEGEVYAV 224

Query: 208 YVNEKNCLRDMFVKNKYRVSLT 215
           Y  EK  L   F     R+SLT
Sbjct: 225 YQKEKENLMQAFSTMPGRISLT 239

[Close]

BLAST of Cmc11g0305341 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-07
Identity = 54/220 (24.55%), Postives = 88/220 (40.00%), Query Frame = 0


Query: 12  SKIVRDEDTDGKRKTIDVDLDSYGRE----DVPNPPKIRKNVKQSMVWDHFERLNGDPND 71
           ++I++  D     + ++ D  ++G E    ++  P   R+  K+S+VW+HF         
Sbjct: 65  NEIIQVNDMIQVNEMVNGDKMAHGHELVGVELTTPTASRRRRKKSVVWEHFTIEEMPGGV 124

Query: 72  PRAKYKYC--GVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKDKVGDN 131
            RA    C     Y+C SK +GT  +K H+      P  K  D           +  G+ 
Sbjct: 125 SRASCNLCKQTFAYSCGSKISGTSHLKRHI-TLASCPMLKNEDMKLSLPLATVTNNDGEG 184

Query: 132 SSQLVCE-----------SFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNH 191
            ++ V +            F  D     L +MII+ + P   VE + F  F+  L     
Sbjct: 185 CAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSL----Q 244

Query: 192 TRFVVPSRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLT 215
            RF V    T+   V  +Y  E+  L  +F     R+SLT
Sbjct: 245 PRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLT 279

[Close]

BLAST of Cmc11g0305341 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06
Identity = 53/189 (28.04%), Postives = 80/189 (42.33%), Query Frame = 0


Query: 42  PPKIRKNVKQSMVWDHF--ERLNGDPNDPRAKYKYC--GVVYACHSKRNGTGTMKHH--L 101
           PP  R+  K+S+VW+HF  E ++G     RA  K C     Y+  SK  GT  +K H  L
Sbjct: 59  PPTSRRRRKKSLVWEHFTIEAVSGGAT--RACCKLCKQTFAYSSGSKIAGTSHLKRHITL 118

Query: 102 ENCKKYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCE-----------SFSLDGCRDALV 161
            +C K    K ++   +       D  G+ + +   +           +F  +     L 
Sbjct: 119 GSCPKI---KNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLA 178

Query: 162 EMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNCLRDMF 214
           +MII+ + P   V+  AF  F+D L      RF V    T+  +V  +Y  EK  L   F
Sbjct: 179 KMIILHDYPLHIVQQPAFTTFIDSL----QPRFRVVDVETMEWEVYAVYQKEKENLMQAF 238

[Close]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121
Identity = 213/217 (98.16%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

[Close]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL
Match: A0A5D3CEC4 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001000 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.3e-121
Identity = 212/217 (97.70%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTT+C
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTNC 222

[Close]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL
Match: A0A5A7SVU3 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00760 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.3e-121
Identity = 212/217 (97.70%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDTDGK KTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTDGKHKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

[Close]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL
Match: A0A5A7SHY6 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00140 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDGSCEASKIVRDEDT+ KRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGSCEASKIVRDEDTNDKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVY CHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYECHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDVLKLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

[Close]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL
Match: A0A5A7THT5 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001530 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.4e-119
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MELECDGSCEASKIVRDEDTDGKRKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 60
           MELECDG+CEASKIVRDEDTDGK KTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER
Sbjct: 6   MELECDGTCEASKIVRDEDTDGKCKTIDVDLDSYGREDVPNPPKIRKNVKQSMVWDHFER 65

Query: 61  LNGDPNDPRAKYKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 120
           L GDPNDPRAK KYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD
Sbjct: 66  LKGDPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCKKYPYQKKRDQTQMTLAFKPKD 125

Query: 121 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVP 180
           KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGK FKKFVDKLTCGNHTRFVVP
Sbjct: 126 KVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEGKGFKKFVDKLTCGNHTRFVVP 185

Query: 181 SRFTVARDVLKLYVNEKNCLRDMFVKNKYRVSLTTDC 218
           SRFTVARDV KLYVNEKN LRDMFVKNKYRVSLTTDC
Sbjct: 186 SRFTVARDVPKLYVNEKNRLRDMFVKNKYRVSLTTDC 222

[Close]

BLAST of Cmc11g0305341 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 52/189 (27.51%), Postives = 78/189 (41.27%), Query Frame = 0


Query: 40  PNPPKIRKNVKQSMVWDHFERLNGDPNDPRAKYKYC--GVVYACHSKRNGTGTMKHHL-- 99
           P    I++  K+SMVW+HF     +PN  RA  K C     Y+  +K  GT  +K H+  
Sbjct: 56  PETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIFK 115

Query: 100 ENCKKYPYQKKRDQTQ-MTLAFKPKD-------KVGDNSSQLVCESFSLDGCRDALVEMI 159
             C    +    D    M+  + PK        +  +N+S  V  +F+ D CR  + +MI
Sbjct: 116 GTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYV--AFNQDKCRQEIAKMI 175

Query: 160 IVDELPFKFVEGKAFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNCLRDMFVKN 217
           I+ + P   V+   F  FV  +       F   S   V  D +  Y+ EK  +       
Sbjct: 176 IMHDYPLHMVQHPGFVSFVQSI----QPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGI 235

The following BLAST results are available for this feature:

BLAST of Cmc11g0305341 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14363.1	2.3e-121	98.16	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0033275.1	8.9e-121	97.70	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
TYK09690.1	8.9e-121	97.70	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0025770.1	2.2e-119	96.77	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0040955.1	2.9e-119	96.77	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]

BLAST of Cmc11g0305341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2N5	3.1e-07	27.51	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
Q6AVI0	4.0e-07	26.73	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
Q75HY5	5.3e-07	24.55	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
B9FJG3	5.8e-06	28.04	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]

BLAST of Cmc11g0305341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR68	1.1e-121	98.16	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3CEC4	4.3e-121	97.70	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7SVU3	4.3e-121	97.70	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7SHY6	1.1e-119	96.77	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7THT5	1.4e-119	96.77	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]

BLAST of Cmc11g0305341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	2.2e-08	27.51	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00614	bed5	coord: 49..101 e-value: 1.7E-8 score: 44.2
None	No IPR available	PANTHER	PTHR34396	OS03G0264950 PROTEIN-RELATED	coord: 10..169
None	No IPR available	PANTHER	PTHR34396:SF1	OS03G0264950 PROTEIN	coord: 10..169
None	No IPR available	SUPERFAMILY	140996	Hermes dimerisation domain	coord: 139..198
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 52..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305341.1	Cmc11g0305341.1	mRNA