Cmc11g0305321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	zinc finger protein CONSTANS-LIKE 1 isoform X1
Location	CMiso1.1chr11: 26662734 .. 26665125 (-)
RNA-Seq Expression	Cmc11g0305321
Synteny	Cmc11g0305321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCGACCTTCCTCTTCTCTCTCCCTCTCTCCCTCTCTCCCTCTCGCGTCTTCTGATCGGAGCTCCTTCATATTTCTCACTCGCCGCTGTTCCTCAGATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGGTGAGGGGAATAAAATTAACTAATGCGACTAAAAAATATATTTGGTGAGACCAACATAACCTCTTTTAGAAAAAAATAAAAATTTATGGATTCAACATATGTATTCAAAGATTTGGGAAAAAAACGTCATAATGTGATGATCATAGGTTTTGGTTGGATATTAGATTCAGGTCCAATGCACTCTGCAAAGGTTGATCATAACTGATGTGACGATGACATTCAATAATATTGTAATTAAAGACAAAAAGTCTATCAGTAACTATACAGATTTTTGTTAATTTTATTCTATCCTTTTAATTTTTATTATATGATTGATTAAAATAAAATAAAAAAAGATTGTGACTTTATTTGAATTTCTGGAAAAATTTATGCCATTAATGAAAGCTAATACAATCATGGTCAACTTAATTCCATGCAAAGGATCATTAGAAAAATGGCCTTTCATGAATCCAAAGAGTTTGTTTTATTATTATTTTTTAAAAAGGGGTCTTGAGTATAATTTTTAAATGACGAATGAGATCAAAAGTAACATATACCATACTATTATTAAAGACAGATGACTAATAAAAATATTCTAATAGTATAGTTTGTGGCCTTGACAAACATTGATCGAATAAGAACATATTAAGTTGTATAAAGATAAGTGAATTAGTGTGTAACTATTTTTGAATGTTTGAAATTGGGTTTTGAATAATTATATTGAAATAATTAATGAGATTGAAAAAATGGCGCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGGTTTCTTTTTTCTCATATTATATTATTCTTTATCTATCTTAATTATTATATAAATGGATTAATTCTTATACAAAGAATAAACAATAATTTCACCTCTTATATATTCTACTATCTACATATTATTTCATAGATTCTAGATGCCAACAACTATATATATCAACTAATATAATTATAATATTTCAATTTCATCTTGATCTTTTTGATTTTGTCACATCTAACTTATATGAGAAACTCCGAAATACCCTTTTTTTATCAATCCTCTCTCTCTCTTTCATTTTAAAGGTTTGAAAGGCCATTTCATCATTTAGAAGAGGGTAACAATGGAAAAGACAGATTTTTTAAAACCATCCCAAAAATGGGTCCAAAAGCCAATTAAGCAACATATTTCATTCAATCAAAATCCTAGATGTGGTTTTTTATGCCTTTTTTTCTATAAATACAATAAATTCAATTCACAAGTAAATGAATCTCTTTTTGTAGGTTACACTCAGCTAATATTATTTGGTTGTTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCATTTGGGTATTGAAGGGTATTTTACGTAATGGTTAGGTACAACTTAAGTTGCACCTAATCTTATACTTTGATCTTCATCTTGGTTAAATACAAATAAATTTCTTAGAAAAAGAACACTAAGAGTATTATATAATGTAATTAAATTTGATTTTATCAAATAGCT

mRNA sequence

CTCTCTCTCGACCTTCCTCTTCTCTCTCCCTCTCTCCCTCTCTCCCTCTCGCGTCTTCTGATCGGAGCTCCTTCATATTTCTCACTCGCCGCTGTTCCTCAGATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCATTTGGGTATTGAAGGGTATTTTACGTAATGGTTAGGTACAACTTAAGTTGCACCTAATCTTATACTTTGATCTTCATCTTGGTTAAATACAAATAAATTTCTTAGAAAAAGAACACTAAGAGTATTATATAATGTAATTAAATTTGATTTTATCAAATAGCT

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAGTCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAGTCACCAACGAGAGGAAGAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPSTNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCGDNWIKYFIDTYSANLIP

Homology

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BLAST of Cmc11g0305321 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 6.1e-131
Identity = 237/240 (98.75%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180
           NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180

Query: 181 ADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLIP 240
           ADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLIP
Sbjct: 181 ADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP 240

[Close]

BLAST of Cmc11g0305321 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of Cmc11g0305321 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 6.2e-115
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQK
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 K-NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWS-HQR----EEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQW+ H+R    EEEQQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

[Close]

BLAST of Cmc11g0305321 vs. NCBI nr
Match: KAA0035270.1 (zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 398.3 bits (1022), Expect = 4.7e-107
Identity = 206/241 (85.48%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSR                               ACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSR-------------------------------ACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of Cmc11g0305321 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.6e-97
Identity = 204/244 (83.61%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSI-KLWNSEFSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSI KLWNSEFSDSCGDGSP SPP+ L I PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSINKLWNSEFSDSCGDGSPTSPPQSLTIRPS 60

Query: 61  TNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSA----AIDPPINRPLFPAGDF 120
            NNFLLHQSFP L+  SLQS ND FLQRTFSSS SPPPSA    A +  INRPLFPAGDF
Sbjct: 61  NNNFLLHQSFPHLD-PSLQS-NDLFLQRTFSSS-SPPPSASAPTAANRLINRPLFPAGDF 120

Query: 121 QKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYA 180
           Q+  NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYA
Sbjct: 121 QR--NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYA 180

Query: 181 CRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCGDNWIKYFIDTYSA 240
           CRKSLADSRPRIRGRFARYND+VVKNYP+QWSH +EEEQ  EAN+CGDNWIKYFID YS 
Sbjct: 181 CRKSLADSRPRIRGRFARYNDDVVKNYPMQWSHGQEEEQ--EANNCGDNWIKYFIDAYST 234

[Close]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 144 ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 197
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 140 GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 197
           G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339

[Close]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 96  PPSAAIDPPINRPLFPAGDFQKKNNNERGDESPVSCESSITIIEG--MSRACRYSPEEKK 155
           P S  ID P +R L PAG                    +I +  G  +  +  +S  +++
Sbjct: 288 PDSTVIDMPNSRILTPAG--------------------AINLFSGPSLQMSLHFSSMDRE 347

Query: 156 ERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 197
            R+ RYR K+  R F K I+Y  RK+ A++RPRI+GRFA+ +D
Sbjct: 348 ARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSD 370

[Close]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 151 EKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 197
           +++ R+ RYR KR  R F K I+YA RK+ A++RPRI+GRFA+ +D
Sbjct: 267 DREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

[Close]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.2e-05
Identity = 45/151 (29.80%), Postives = 67/151 (44.37%), Query Frame = 0


Query: 53  PLKIHPSTNNFLLHQSFPLL----NHDSLQSNNDSFLQRTFSSSLS---PPPSAAIDPPI 112
           PL+I  S   +   Q+F L     +  +L+S+N S       SS+     P S   D  +
Sbjct: 201 PLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATV 260

Query: 113 NRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQ 172
           + P  P                      ++T       A   SP +++ R+ RYR K+  
Sbjct: 261 SNPRSP---------------------KAVTDQPPYPPAQMLSPRDREARVLRYREKKKM 320

Query: 173 RNFNKKIKYACRKSLADSRPRIRGRFARYND 197
           R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 321 RKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.0e-131
Identity = 237/240 (98.75%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180
           NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180

Query: 181 ADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLIP 240
           ADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLIP
Sbjct: 181 ADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP 240

[Close]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 237/241 (98.34%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQK
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 K-NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWS-HQR----EEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQW+ H+R    EEEQQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

[Close]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL
Match: A0A5A7SW55 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00610 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.3e-107
Identity = 206/241 (85.48%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSR                               ACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSR-------------------------------ACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWSHQREEE-QQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQW+ QREEE QQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of Cmc11g0305321 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-24
Identity = 71/135 (52.59%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 102 DPPINRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRT 161
           D P+ R L  AGD  +   + R + S V  ES+  IIEGMS+A +YSPEEKKE+IE+YR+
Sbjct: 118 DGPVRRAL-SAGDLPR---SSRRESSTVWSESN-AIIEGMSKAYKYSPEEKKEKIEKYRS 177

Query: 162 KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSC 221
           KRN RNFNK+IKY CRK+LADSRPRIRGRFAR NDE+        S Q + +        
Sbjct: 178 KRNLRNFNKRIKYECRKTLADSRPRIRGRFAR-NDEI--------SQQEQVDVMEAVVGD 237

Query: 222 GDNWIKYFIDTYSAN 237
            D W   F+D++SAN
Sbjct: 238 VDTWAS-FLDSFSAN 237

[Close]

BLAST of Cmc11g0305321 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-19
Identity = 57/113 (50.44%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 107 RPLFPAGDFQKKNNN---ERGDESPVSCESSITII----EGMSRACRYSPEEKKERIERY 166
           R ++  GD Q    +   +R   SP++ ESS T +    E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 167 RTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREE 213
           R KR QRNF K IKYACRK+LAD+RPR+RGRFAR NDEV +N  +  S  R+E
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR-NDEVFENPKIASSFTRQE 251

[Close]

BLAST of Cmc11g0305321 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-18
Identity = 60/133 (45.11%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 68  SFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNNNERGDES 127
           + P+++  +L  NN S  +  F SS              R ++  GD Q     +R  E+
Sbjct: 147 NIPMMDSSNLSYNNLSSPENAFFSSQM------------RRVYSTGDLQNNMEMQRSSEN 206

Query: 128 PVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRI 187
                S     E   +  RYS EE+KE+I +YR KRNQRNF K IKYACRK+LADSRPRI
Sbjct: 207 STMPFSE----EQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRI 262

Query: 188 RGRFARYNDEVVK 201
           RGRFAR NDEVV+
Sbjct: 267 RGRFAR-NDEVVE 262

[Close]

BLAST of Cmc11g0305321 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 104 PINRPLF-PAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTK 163
           P  +PLF PA   Q   N+E G ++           E  ++  RYS EE+K+RI RY  K
Sbjct: 101 PEIKPLFRPATGEQSWGNSEGGIQA-----------EPNTKVGRYSVEERKDRIMRYLKK 160

Query: 164 RNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWSHQREEEQQREANSCG 223
           +NQRNFNK IKY CRK+LAD R R+RGRFAR ND   +   +  +H    E++ +  S  
Sbjct: 161 KNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSEKEEDMFSGS 213

Query: 224 DNWI 227
           D+++
Sbjct: 221 DDYL 213

[Close]

BLAST of Cmc11g0305321 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-15
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 141 MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVK 200
           +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ ++    
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEP 359

Query: 201 NYPVQWSHQREEEQ 215
           N     SH  +E++
Sbjct: 360 NRQAFSSHHDDEDE 373

The following BLAST results are available for this feature:

BLAST of Cmc11g0305321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463853.1	6.1e-131	98.75	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
XP_008463852.1	1.5e-129	98.34	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK143...	[more]
XP_011657240.1	6.2e-115	91.13	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical p...	[more]
KAA0035270.1	4.7e-107	85.48	zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038902180.1	2.6e-97	83.61	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]

BLAST of Cmc11g0305321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	1.3e-06	52.83	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	3.7e-06	49.12	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9FDX8	8.4e-06	33.98	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=...	[more]
O82117	2.4e-05	52.17	Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=...	[more]
O50055	3.2e-05	29.80	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]

BLAST of Cmc11g0305321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK56	3.0e-131	98.75	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3CRZ2	7.3e-130	98.34	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK62	7.3e-130	98.34	zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KG14	3.0e-115	91.13	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV...	[more]
A0A5A7SW55	2.3e-107	85.48	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Cmc11g0305321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	4.1e-24	52.59	CCT motif family protein	[more]
AT1G63820.1	1.8e-19	50.44	CCT motif family protein	[more]
AT5G41380.1	5.7e-18	45.11	CCT motif family protein	[more]
AT3G12890.1	1.2e-15	41.94	activator of spomin::LUC2	[more]
AT2G33350.1	2.7e-15	54.05	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 153..193 e-value: 2.8E-17 score: 62.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 152..194 score: 15.417831
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..131
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 60..234
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 60..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305321.1	Cmc11g0305321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding