Homology
BLAST of Cmc11g0305281 vs. NCBI nr
Match:
KAA0035996.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 537.3 bits (1383), Expect = 1.0e-148
Identity = 265/346 (76.59%), Postives = 296/346 (85.55%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+++IHAK+LPLHF AEA+N +CHIH RI TRSG+ VTLYELWKGRKPNVKYFHIF T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKSEQGLFLG SQNSRAY+VFNNRT VMETIN+VVN+SE T K+
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
DD+ D P VT+ P +T D+SKAD T + + K T +EA E T PIPSSHV KNHP
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQF 240
SSSIIGD SAGITTRKKDK+DY+KMI+ LCYTSAIEPTSV+AALKDEYWINAMQE+L+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357
Query: 241 KRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFAL 300
KRNNVWTLVPKP G NIIGTKWVFKNKTDE+GCVTRNKA LVAQGYAQ++G+DFDE F
Sbjct: 358 KRNNVWTLVPKPNGVNIIGTKWVFKNKTDESGCVTRNKACLVAQGYAQIEGVDFDEIFVP 417
Query: 301 VAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKG 347
V +LEAIRLLL ISC HK KLY MDVKS FLNGYLNE+VYVAQPKG
Sbjct: 418 VTRLEAIRLLLGISCIHKFKLYQMDVKSTFLNGYLNEEVYVAQPKG 463
BLAST of Cmc11g0305281 vs. NCBI nr
Match:
KAA0065523.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK29295.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-138
Identity = 267/372 (71.77%), Postives = 291/372 (78.23%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAKALPLHF AEAVNT+CHIHNRI + GTTVTLYELWKGRKPNVKYF++F ST
Sbjct: 48 MARVMIHAKALPLHFFAEAVNTACHIHNRITIQFGTTVTLYELWKGRKPNVKYFYVFWST 107
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL NREY+RKWDAKSE GLFLGYSQNSRAYRVFNNRT MVMETINVVVN+ E TYKR+
Sbjct: 108 CYILANREYNRKWDAKSEHGLFLGYSQNSRAYRVFNNRTGMVMETINVVVNDFEHTYKRT 167
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
DDD + AP VTMVP TTI D+ K DT NS++++ KS P+E T EETEPIPSSHV KNHP
Sbjct: 168 DDD-ELAPKVTMVPKTTIDDIPKVDTSINSLEENSKSIPKEVTVEETEPIPSSHVGKNHP 227
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQF 240
SSSII D S +T RKKDK I+AMQE+LLQF
Sbjct: 228 SSSIIRDPSTRVTIRKKDK------------------------------IHAMQEELLQF 287
Query: 241 KRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFAL 300
K NNVWTLVPKP G+NIIGTKW+FKNKTDEAG VTRNKARLVAQGYAQV+G+DF+ETFA
Sbjct: 288 KHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFNETFAP 347
Query: 301 VAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLN 360
VAKLEAIRLLL ISC K KLY MDVKS FLNGYLNE+VYVA QHVYKLN
Sbjct: 348 VAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVA-----------QHVYKLN 377
Query: 361 KTLYGLKQAPRA 373
K LYGLKQAPRA
Sbjct: 408 KALYGLKQAPRA 377
BLAST of Cmc11g0305281 vs. NCBI nr
Match:
TYK21443.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 503.4 bits (1295), Expect = 1.6e-138
Identity = 261/391 (66.75%), Postives = 301/391 (76.98%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAK LPL+F AEAVNT+CHIHNR+ TRSG TVTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKS QG+FLGYSQNSRAYRVFN ++ VMETINVVVN+ ES +
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
+ ++D V T + +M K ++ +S K+ S E ET +PS+HV+KNHP
Sbjct: 713 NIEDDETHVTPEVTSTPLDEMPKGESQLHSA-KTDSSITDEVINNETMLVPSAHVKKNHP 772
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMI-------------------VGLCYTSAIEPTSVD 240
SSSII D SAGITTR+K+ ++ I LCY SAIEPTSV+
Sbjct: 773 SSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQNYKDLCYVSAIEPTSVE 832
Query: 241 AALKDEYWINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARL 300
+LKDEYWI MQE+ LQFKRNNVWTLVPKP GANIIGTKW+FKNKTDE+G + RNKARL
Sbjct: 833 NSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIRNKARL 892
Query: 301 VAQGYAQVKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYV 360
VAQGY QV+G+D DETFA VA+LEAIRLLL ISCF K KL+ MDVKS FLNGYLNE+V V
Sbjct: 893 VAQGYTQVEGVDCDETFAPVARLEAIRLLLSISCFQKFKLFQMDVKSAFLNGYLNEEVNV 952
Query: 361 AQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
A+PKGF+DSEFPQ+VYKLNK LYGLKQAPRA
Sbjct: 953 AEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 982
BLAST of Cmc11g0305281 vs. NCBI nr
Match:
KAA0035157.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 495.7 bits (1275), Expect = 3.4e-136
Identity = 241/347 (69.45%), Postives = 290/347 (83.57%), Query Frame = 0
Query: 27 HNRIITRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILINREYHRKWDAKSEQGLFLGYS 86
H R+ R+GTTVTLYELWK RKPNVKYFH+FGSTCYIL +REY +KWDA+SEQG+FLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469
Query: 87 QNSRAYRVFNNRTRMVMETINVVVNNSESTYKRSDDDNDSAPTVTMVPDTTIVDMSKADT 146
QN+ AYRV+NNR+ VMETINVV+N+ +S K+ +D+ D P ++ V T+ V+ SKAD
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529
Query: 147 GTNSVDKSLKSTPREATTEETEPIPSSHVRKNHPSSSIIGDSSAGITTRKKDKVDYTKMI 206
++S+ KSLK + E ++++ IPS+HV+KNHP+SSIIGD SAG+ TR+KDK+DY KM+
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589
Query: 207 VGLCYTSAIEPTSVD-AALKDEYWINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFK 266
LCY S IE ++VD +ALKDEYW+NAMQE+LLQF+RNNVW LV KP G N+IGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649
Query: 267 NKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMD 326
NKTDE GCVT+NKARLVAQGY QV+G+DFDETFA VA+LEAIRLLL ISC K KLY MD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709
Query: 327 VKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
VKSDFLNGYLNE+VYVAQPKGFVD E P+HVYKLNK LYGLKQAP A
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGA 756
BLAST of Cmc11g0305281 vs. NCBI nr
Match:
KAA0051798.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 493.4 bits (1269), Expect = 1.7e-135
Identity = 261/418 (62.44%), Postives = 301/418 (72.01%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAK LPL+F AEAVNT+CHIHNR+ TRSG TVTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKS QG+FLGYSQNSRAYRVFN ++ VMETINVVVN+ ES +
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
+ ++D V T + +M K ++ +S K+ S E ET +PS+HV+KNHP
Sbjct: 713 NIEDDETHVTPEVTSTPLDEMPKGESQLHSA-KTDSSITDEVINNETMLVPSAHVKKNHP 772
Query: 181 SSSIIGDSSAGITTRKKDKV---------------------------------------- 240
SSSII D SAGITTR+K+ V
Sbjct: 773 SSSIISDPSAGITTRRKEMVRAAQHRWPDKPPISGSHNSVLGPKYSRSAWWLSLLVIFRK 832
Query: 241 ------DYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQFKRNNVWTLVPKPKG 300
+ + LCY SAIEPTSV+ +LKDEYWI MQE+ LQFKRNNVWTLVPKP G
Sbjct: 833 RKFWIKEEVQNYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDG 892
Query: 301 ANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLLDIS 360
ANIIGTKW+FKNKTDE+G + RNKARLVAQGY QV+G+D DETFA VA+LEAIRLLL IS
Sbjct: 893 ANIIGTKWIFKNKTDESGSIIRNKARLVAQGYTQVEGVDCDETFAPVARLEAIRLLLSIS 952
Query: 361 CFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
CF K KL+ MDVKS FLNGYLNE+V VA+PKGF+DSEFPQ+VYKLNK LYGLKQAPRA
Sbjct: 953 CFQKFKLFQMDVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 1009
BLAST of Cmc11g0305281 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 4.1e-36
Identity = 115/383 (30.03%), Postives = 187/383 (48.83%), Query Frame = 0
Query: 5 MIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYEL----WKGRKPNVKYFHIFGST 64
M+ LP F EAV T+C+ +I RS + +E+ W ++ + + +FG
Sbjct: 599 MLRMAKLPKSFWGEAVQTACY----LINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCR 658
Query: 65 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 124
+ + +E K D KS +F+GY YR+++ + V+ + +VV SE
Sbjct: 659 AFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAAD 718
Query: 125 DDD---NDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRK 184
+ N P +P T+ + + A++ T+ V + P E E+ E +
Sbjct: 719 MSEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQ-GEQPGE-VIEQGEQLDEGVEEV 778
Query: 185 NHPSSS------IIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAAL---KDEY 244
HP+ + + +R+ +Y + + EP S+ L +
Sbjct: 779 EHPTQGEEQHQPLRRSERPRVESRRYPSTEY------VLISDDREPESLKEVLSHPEKNQ 838
Query: 245 WINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQ 304
+ AMQE++ ++N + LV PKG + KWVFK K D + R KARLV +G+ Q
Sbjct: 839 LMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQ 898
Query: 305 VKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFV 364
KGIDFDE F+ V K+ +IR +L ++ ++ +DVK+ FL+G L E++Y+ QP+GF
Sbjct: 899 KKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFE 958
Query: 365 DSEFPQHVYKLNKTLYGLKQAPR 372
+ V KLNK+LYGLKQAPR
Sbjct: 959 VAGKKHMVCKLNKSLYGLKQAPR 968
BLAST of Cmc11g0305281 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30
Identity = 86/262 (32.82%), Postives = 134/262 (51.15%), Query Frame = 0
Query: 112 NSESTYKRSDDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIP 171
+S +++ N+S + T S + + T S S ++P + P P
Sbjct: 853 HSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSS-STSPTPPSILIHPPPP 912
Query: 172 SSHVRKNHPSSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWIN 231
+ + N+ + + + S G + K + + + EP + ALKDE W N
Sbjct: 913 LAQIVNNN-NQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRN 972
Query: 232 AMQEKLLQFKRNNVWTLVPKPKG-ANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVK 291
AM ++ N+ W LVP P I+G +W+F K + G + R KARLVA+GY Q
Sbjct: 973 AMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRP 1032
Query: 292 GIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFVDS 351
G+D+ ETF+ V K +IR++L ++ + +DV + FL G L + VY++QP GF+D
Sbjct: 1033 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDK 1092
Query: 352 EFPQHVYKLNKTLYGLKQAPRA 373
+ P +V KL K LYGLKQAPRA
Sbjct: 1093 DRPNYVCKLRKALYGLKQAPRA 1112
BLAST of Cmc11g0305281 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28
Identity = 86/266 (32.33%), Postives = 134/266 (50.38%), Query Frame = 0
Query: 109 VVNNSESTYKRSDDDNDSAP-TVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEET 168
++NN + N ++P + + I S + + NS S STP
Sbjct: 836 ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPA 895
Query: 169 EPIPSSHVRKNHPSSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDE 228
PI + + + S+ + GI + K Y + + EP + A+KD+
Sbjct: 896 PPIIQVNAQAPVNTHSMATRAKDGI-RKPNQKYSYATSL-----AANSEPRTAIQAMKDD 955
Query: 229 YWINAMQEKLLQFKRNNVWTLV-PKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGY 288
W AM ++ N+ W LV P P I+G +W+F K + G + R KARLVA+GY
Sbjct: 956 RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGY 1015
Query: 289 AQVKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKG 348
Q G+D+ ETF+ V K +IR++L ++ + +DV + FL G L ++VY++QP G
Sbjct: 1016 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPG 1075
Query: 349 FVDSEFPQHVYKLNKTLYGLKQAPRA 373
FVD + P +V +L K +YGLKQAPRA
Sbjct: 1076 FVDKDRPDYVCRLRKAIYGLKQAPRA 1095
BLAST of Cmc11g0305281 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 124.0 bits (310), Expect = 3.5e-27
Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 0
Query: 229 WINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQ 288
W A+ +L K NN WT+ +P+ NI+ ++WVF K +E G R KARLVA+G+ Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 289 VKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFV 348
ID++ETFA VA++ + R +L + + K++ MDVK+ FLNG L E++Y+ P+G
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI- 1025
Query: 349 DSEFPQHVYKLNKTLYGLKQAPR 372
S +V KLNK +YGLKQA R
Sbjct: 1026 -SCNSDNVCKLNKAIYGLKQAAR 1046
BLAST of Cmc11g0305281 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.6e-19
Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 0
Query: 194 TRKKDKVDYTKMIVGLCYTSAI--EPTSVDAALKDEYWINAMQEKLLQFKRNNVWTLVPK 253
TR K ++ L T+ I EP SV ALKD W AMQE+L RN W LVP
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62
Query: 254 PKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLL 313
P NI+G KWVFK K G + R KARLVA+G+ Q +GI F ET++ V + IR +L
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122
Query: 314 DIS 315
+++
Sbjct: 123 NVA 125
BLAST of Cmc11g0305281 vs. ExPASy TrEMBL
Match:
A0A5A7T197 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G002100 PE=4 SV=1)
HSP 1 Score: 537.3 bits (1383), Expect = 4.9e-149
Identity = 265/346 (76.59%), Postives = 296/346 (85.55%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+++IHAK+LPLHF AEA+N +CHIH RI TRSG+ VTLYELWKGRKPNVKYFHIF T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKSEQGLFLG SQNSRAY+VFNNRT VMETIN+VVN+SE T K+
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
DD+ D P VT+ P +T D+SKAD T + + K T +EA E T PIPSSHV KNHP
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQF 240
SSSIIGD SAGITTRKKDK+DY+KMI+ LCYTSAIEPTSV+AALKDEYWINAMQE+L+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357
Query: 241 KRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFAL 300
KRNNVWTLVPKP G NIIGTKWVFKNKTDE+GCVTRNKA LVAQGYAQ++G+DFDE F
Sbjct: 358 KRNNVWTLVPKPNGVNIIGTKWVFKNKTDESGCVTRNKACLVAQGYAQIEGVDFDEIFVP 417
Query: 301 VAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKG 347
V +LEAIRLLL ISC HK KLY MDVKS FLNGYLNE+VYVAQPKG
Sbjct: 418 VTRLEAIRLLLGISCIHKFKLYQMDVKSTFLNGYLNEEVYVAQPKG 463
BLAST of Cmc11g0305281 vs. ExPASy TrEMBL
Match:
A0A5A7VBG7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00630 PE=4 SV=1)
HSP 1 Score: 503.8 bits (1296), Expect = 6.0e-139
Identity = 267/372 (71.77%), Postives = 291/372 (78.23%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAKALPLHF AEAVNT+CHIHNRI + GTTVTLYELWKGRKPNVKYF++F ST
Sbjct: 48 MARVMIHAKALPLHFFAEAVNTACHIHNRITIQFGTTVTLYELWKGRKPNVKYFYVFWST 107
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL NREY+RKWDAKSE GLFLGYSQNSRAYRVFNNRT MVMETINVVVN+ E TYKR+
Sbjct: 108 CYILANREYNRKWDAKSEHGLFLGYSQNSRAYRVFNNRTGMVMETINVVVNDFEHTYKRT 167
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
DDD + AP VTMVP TTI D+ K DT NS++++ KS P+E T EETEPIPSSHV KNHP
Sbjct: 168 DDD-ELAPKVTMVPKTTIDDIPKVDTSINSLEENSKSIPKEVTVEETEPIPSSHVGKNHP 227
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQF 240
SSSII D S +T RKKDK I+AMQE+LLQF
Sbjct: 228 SSSIIRDPSTRVTIRKKDK------------------------------IHAMQEELLQF 287
Query: 241 KRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFAL 300
K NNVWTLVPKP G+NIIGTKW+FKNKTDEAG VTRNKARLVAQGYAQV+G+DF+ETFA
Sbjct: 288 KHNNVWTLVPKPDGSNIIGTKWIFKNKTDEAGHVTRNKARLVAQGYAQVEGVDFNETFAP 347
Query: 301 VAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLN 360
VAKLEAIRLLL ISC K KLY MDVKS FLNGYLNE+VYVA QHVYKLN
Sbjct: 348 VAKLEAIRLLLSISCIRKFKLYQMDVKSAFLNGYLNEEVYVA-----------QHVYKLN 377
Query: 361 KTLYGLKQAPRA 373
K LYGLKQAPRA
Sbjct: 408 KALYGLKQAPRA 377
BLAST of Cmc11g0305281 vs. ExPASy TrEMBL
Match:
A0A5D3DCZ8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G001130 PE=4 SV=1)
HSP 1 Score: 503.4 bits (1295), Expect = 7.9e-139
Identity = 261/391 (66.75%), Postives = 301/391 (76.98%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAK LPL+F AEAVNT+CHIHNR+ TRSG TVTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKS QG+FLGYSQNSRAYRVFN ++ VMETINVVVN+ ES +
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
+ ++D V T + +M K ++ +S K+ S E ET +PS+HV+KNHP
Sbjct: 713 NIEDDETHVTPEVTSTPLDEMPKGESQLHSA-KTDSSITDEVINNETMLVPSAHVKKNHP 772
Query: 181 SSSIIGDSSAGITTRKKDKVDYTKMI-------------------VGLCYTSAIEPTSVD 240
SSSII D SAGITTR+K+ ++ I LCY SAIEPTSV+
Sbjct: 773 SSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQNYKDLCYVSAIEPTSVE 832
Query: 241 AALKDEYWINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARL 300
+LKDEYWI MQE+ LQFKRNNVWTLVPKP GANIIGTKW+FKNKTDE+G + RNKARL
Sbjct: 833 NSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIRNKARL 892
Query: 301 VAQGYAQVKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYV 360
VAQGY QV+G+D DETFA VA+LEAIRLLL ISCF K KL+ MDVKS FLNGYLNE+V V
Sbjct: 893 VAQGYTQVEGVDCDETFAPVARLEAIRLLLSISCFQKFKLFQMDVKSAFLNGYLNEEVNV 952
Query: 361 AQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
A+PKGF+DSEFPQ+VYKLNK LYGLKQAPRA
Sbjct: 953 AEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 982
BLAST of Cmc11g0305281 vs. ExPASy TrEMBL
Match:
A0A5A7T0Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002510 PE=4 SV=1)
HSP 1 Score: 495.7 bits (1275), Expect = 1.6e-136
Identity = 241/347 (69.45%), Postives = 290/347 (83.57%), Query Frame = 0
Query: 27 HNRIITRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILINREYHRKWDAKSEQGLFLGYS 86
H R+ R+GTTVTLYELWK RKPNVKYFH+FGSTCYIL +REY +KWDA+SEQG+FLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469
Query: 87 QNSRAYRVFNNRTRMVMETINVVVNNSESTYKRSDDDNDSAPTVTMVPDTTIVDMSKADT 146
QN+ AYRV+NNR+ VMETINVV+N+ +S K+ +D+ D P ++ V T+ V+ SKAD
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529
Query: 147 GTNSVDKSLKSTPREATTEETEPIPSSHVRKNHPSSSIIGDSSAGITTRKKDKVDYTKMI 206
++S+ KSLK + E ++++ IPS+HV+KNHP+SSIIGD SAG+ TR+KDK+DY KM+
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589
Query: 207 VGLCYTSAIEPTSVD-AALKDEYWINAMQEKLLQFKRNNVWTLVPKPKGANIIGTKWVFK 266
LCY S IE ++VD +ALKDEYW+NAMQE+LLQF+RNNVW LV KP G N+IGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649
Query: 267 NKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLLDISCFHKCKLYHMD 326
NKTDE GCVT+NKARLVAQGY QV+G+DFDETFA VA+LEAIRLLL ISC K KLY MD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709
Query: 327 VKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
VKSDFLNGYLNE+VYVAQPKGFVD E P+HVYKLNK LYGLKQAP A
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGA 756
BLAST of Cmc11g0305281 vs. ExPASy TrEMBL
Match:
A0A5A7U931 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002070 PE=4 SV=1)
HSP 1 Score: 493.4 bits (1269), Expect = 8.1e-136
Identity = 261/418 (62.44%), Postives = 301/418 (72.01%), Query Frame = 0
Query: 1 MAQVMIHAKALPLHFLAEAVNTSCHIHNRIITRSGTTVTLYELWKGRKPNVKYFHIFGST 60
MA+VMIHAK LPL+F AEAVNT+CHIHNR+ TRSG TVTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652
Query: 61 CYILINREYHRKWDAKSEQGLFLGYSQNSRAYRVFNNRTRMVMETINVVVNNSESTYKRS 120
CYIL +REYHRKWDAKS QG+FLGYSQNSRAYRVFN ++ VMETINVVVN+ ES +
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712
Query: 121 DDDNDSAPTVTMVPDTTIVDMSKADTGTNSVDKSLKSTPREATTEETEPIPSSHVRKNHP 180
+ ++D V T + +M K ++ +S K+ S E ET +PS+HV+KNHP
Sbjct: 713 NIEDDETHVTPEVTSTPLDEMPKGESQLHSA-KTDSSITDEVINNETMLVPSAHVKKNHP 772
Query: 181 SSSIIGDSSAGITTRKKDKV---------------------------------------- 240
SSSII D SAGITTR+K+ V
Sbjct: 773 SSSIISDPSAGITTRRKEMVRAAQHRWPDKPPISGSHNSVLGPKYSRSAWWLSLLVIFRK 832
Query: 241 ------DYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQFKRNNVWTLVPKPKG 300
+ + LCY SAIEPTSV+ +LKDEYWI MQE+ LQFKRNNVWTLVPKP G
Sbjct: 833 RKFWIKEEVQNYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDG 892
Query: 301 ANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLLDIS 360
ANIIGTKW+FKNKTDE+G + RNKARLVAQGY QV+G+D DETFA VA+LEAIRLLL IS
Sbjct: 893 ANIIGTKWIFKNKTDESGSIIRNKARLVAQGYTQVEGVDCDETFAPVARLEAIRLLLSIS 952
Query: 361 CFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFVDSEFPQHVYKLNKTLYGLKQAPRA 373
CF K KL+ MDVKS FLNGYLNE+V VA+PKGF+DSEFPQ+VYKLNK LYGLKQAPRA
Sbjct: 953 CFQKFKLFQMDVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 1009
BLAST of Cmc11g0305281 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28
Identity = 86/249 (34.54%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 141 MSKADTGTNSVDKSLKSTPREATTEETEPIPS---SHVRKNHP-----------SSSIIG 200
+S AD T+S S+ P A + P PS SH R P +S I
Sbjct: 2 VSDADASTSS--SSIDIMP-SANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIH 61
Query: 201 DSSAGITTRKKDKVDYTKMIVGLCYTSAIEPTSVDAALKDEYWINAMQEKLLQFKRNNVW 260
D S ++ K + ++ ++ C A EP++ + A + W AM +++ + + W
Sbjct: 62 DISQFLSYEKVSPLYHSFLV---CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTW 121
Query: 261 TLVPKPKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEA 320
+ P IG KWV+K K + G + R KARLVA+GY Q +GIDF ETF+ V KL +
Sbjct: 122 EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTS 181
Query: 321 IRLLLDISCFHKCKLYHMDVKSDFLNGYLNEKVYVAQPKGFV----DSEFPQHVYKLNKT 372
++L+L IS + L+ +D+ + FLNG L+E++Y+ P G+ DS P V L K+
Sbjct: 182 VKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKS 241
BLAST of Cmc11g0305281 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 98.6 bits (244), Expect = 1.1e-20
Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 0
Query: 194 TRKKDKVDYTKMIVGLCYTSAI--EPTSVDAALKDEYWINAMQEKLLQFKRNNVWTLVPK 253
TR K ++ L T+ I EP SV ALKD W AMQE+L RN W LVP
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62
Query: 254 PKGANIIGTKWVFKNKTDEAGCVTRNKARLVAQGYAQVKGIDFDETFALVAKLEAIRLLL 313
P NI+G KWVFK K G + R KARLVA+G+ Q +GI F ET++ V + IR +L
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122
Query: 314 DIS 315
+++
Sbjct: 123 NVA 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0035996.1 | 1.0e-148 | 76.59 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0065523.1 | 1.2e-138 | 71.77 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK29295.1 gag-pol polyprotein [... | [more] |
TYK21443.1 | 1.6e-138 | 66.75 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0035157.1 | 3.4e-136 | 69.45 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0051798.1 | 1.7e-135 | 62.44 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 4.1e-36 | 30.03 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 2.6e-30 | 32.82 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.1e-28 | 32.33 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 3.5e-27 | 44.06 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92520 | 1.6e-19 | 44.72 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T197 | 4.9e-149 | 76.59 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G0... | [more] |
A0A5A7VBG7 | 6.0e-139 | 71.77 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212... | [more] |
A0A5D3DCZ8 | 7.9e-139 | 66.75 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G... | [more] |
A0A5A7T0Q0 | 1.6e-136 | 69.45 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0... | [more] |
A0A5A7U931 | 8.1e-136 | 62.44 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G0... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 1.1e-28 | 34.54 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.1e-20 | 44.72 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |