Cmc11g0304851 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304851
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 26202010 .. 26202843 (+)
RNA-Seq Expression	Cmc11g0304851
Synteny	Cmc11g0304851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCAAGACAGCCTTTTTGAACGGTAATCTTGAAGAGAGTATTTATAAGGTCCAGCCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAAGGTTTATAAGCTTCAAAAATCCATTTATGGATTGAAACAAACTTCTAGATTCTGGAATATAAGATTTGATACTGCGATCAAATCCTATGGTTTTGAACAGAATGTTGATGAATCTTGTGTTTACAAAAGGATCATCAATTCTACTATAACATTCTTAATATTGTATGTAGATGACATTCTACTCATTGGGAATGACGTAGGTCATCTAACTGATATTAAGGAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTAGTATCCAAATAGTTCGGAACCGAAAGAACAAAACTCTAGCCATGTCTCAAACATCTTATATAGATAAAATATTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGTCACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACGTTTGCTATTCAGTAGGAATTGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAGCCGTTAAGAACATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAATAAAGATGCTAGAATGTCTACATCAGGATCAGTTTTCACTCTGA

mRNA sequence

ATGGATGTCAAGACAGCCTTTTTGAACGGTAATCTTGAAGAGAGTATTTATAAGGTCCAGCCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAAGGTTTATAAGCTTCAAAAATCCATTTATGGATTGAAACAAACTTCTAGATTCTGGAATATAAGATTTGATACTGCGATCAAATCCTATGGTTTTGAACAGAATGTTGATGAATCTTGTGTTTACAAAAGGATCATCAATTCTACTATAACATTCTTAATATTGTATGTAGATGACATTCTACTCATTGGGAATGACGTAGGTCATCTAACTGATATTAAGGAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTAGTATCCAAATAGTTCGGAACCGAAAGAACAAAACTCTAGCCATGTCTCAAACATCTTATATAGATAAAATATTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGTCACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACGTTTGCTATTCAGTAGGAATTGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAGCCGTTAAGAACATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAATAAAGATGCTAGAATGTCTACATCAGGATCAGTTTTCACTCTGA

Coding sequence (CDS)

ATGGATGTCAAGACAGCCTTTTTGAACGGTAATCTTGAAGAGAGTATTTATAAGGTCCAGCCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAAGGTTTATAAGCTTCAAAAATCCATTTATGGATTGAAACAAACTTCTAGATTCTGGAATATAAGATTTGATACTGCGATCAAATCCTATGGTTTTGAACAGAATGTTGATGAATCTTGTGTTTACAAAAGGATCATCAATTCTACTATAACATTCTTAATATTGTATGTAGATGACATTCTACTCATTGGGAATGACGTAGGTCATCTAACTGATATTAAGGAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTAGTATCCAAATAGTTCGGAACCGAAAGAACAAAACTCTAGCCATGTCTCAAACATCTTATATAGATAAAATATTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGTCACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACGTTTGCTATTCAGTAGGAATTGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAGCCGTTAAGAACATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAATAAAGATGCTAGAATGTCTACATCAGGATCAGTTTTCACTCTGA

Protein sequence

MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKSYGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQIKMLECLHQDQFSL

Homology

[Close]

BLAST of Cmc11g0304851 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 471.5 bits (1212), Expect = 5.1e-129
Identity = 229/263 (87.07%), Postives = 246/263 (93.54%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            MDVKTAFLNGNLEESIY VQPEGFI + QEQKV KLQKSIYGLKQ SR WNIRFDTAIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
            YGFEQNVDE CVYK+I+NS + FLILYVDDILLIGNDV +LTD+K+WL TQFQMKDLG A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
            QY+L IQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPK+PQ
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQ 1094

Query: 181  EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
            EVEDM NIPY+SAVGSLMYAMLCTRPD+CYSVGIVSRYQSN GRDHWTAVKNILKYLRRT
Sbjct: 1095 EVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRT 1154

Query: 241  KDYMLVYGSKDLILTGYTDSDFQ 264
            ++YMLVYG+KDLILTGYTDSDFQ
Sbjct: 1155 RNYMLVYGAKDLILTGYTDSDFQ 1177

[Close]

BLAST of Cmc11g0304851 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 467.2 bits (1201), Expect = 9.6e-128
Identity = 231/263 (87.83%), Postives = 241/263 (91.63%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           MDVKT FLN NLEESIY VQPE FIQKGQEQK+ KLQKSIYGLKQ SR  NIRFDTAIKS
Sbjct: 339 MDVKTTFLNANLEESIYMVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKS 398

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YG EQNVDE CVYKRI+NST+ FL+LYVDDILLIGNDVGHL DIK+WLA QFQMKDLGNA
Sbjct: 399 YGLEQNVDEPCVYKRIMNSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNA 458

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
           QYVL +QIVRNRKNKTLAMSQTSYIDK+LSRYKM NSKKGLLPYRYGIHLSKEQCPK+PQ
Sbjct: 459 QYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQ 518

Query: 181 EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
           EVEDMSNIPYASAVGSLMY MLCTRP++CYSVGIVSR QS  GRDHWT VKNILKYLRRT
Sbjct: 519 EVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRT 578

Query: 241 KDYMLVYGSKDLILTGYTDSDFQ 264
           KDYMLVYGSKDLILTGYTD  FQ
Sbjct: 579 KDYMLVYGSKDLILTGYTDFYFQ 601

[Close]

BLAST of Cmc11g0304851 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 461.1 bits (1185), Expect = 6.9e-126
Identity = 225/245 (91.84%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 19  VQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKSYGFEQNVDESCVYKRIIN 78
           VQPEGFIQKGQEQKV KL+KSIYGLKQ +R WNIRFDTAIKSYGFEQNVDE CVYKR IN
Sbjct: 2   VQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFIN 61

Query: 79  STITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLSIQIVRNRKNKTLA 138
           +T+ FL+LYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVL IQIVRN KNKTLA
Sbjct: 62  ATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTLA 121

Query: 139 MSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLM 198
           MSQTSYIDK+LSRYKMQNSKKGLLPYRYGIHLSKEQCPK+PQEVEDMSNIPYASA+GSLM
Sbjct: 122 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLM 181

Query: 199 YAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 258
           YAMLCTR D+CYSVGIV+RYQSN GRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT
Sbjct: 182 YAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 241

Query: 259 DSDFQ 264
           DSDFQ
Sbjct: 242 DSDFQ 246

[Close]

BLAST of Cmc11g0304851 vs. NCBI nr
Match: KAA0063026.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123
Identity = 228/283 (80.57%), Postives = 241/283 (85.16%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           MDVK AFLNGNLEESIY VQPEG IQKGQEQKV KLQKSIYGLKQ SR WNIRFD AIKS
Sbjct: 367 MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 426

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YGF+QNV+E CVYKRI NST+ FL+LYVD+ILLIGNDV  LTDIK+WLATQFQMKDLGNA
Sbjct: 427 YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 486

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKI--------------------LSRYKMQNSKKG 180
           QYVL IQ VRNRKNKTL MSQTSYID +                    LSRYKMQNSKKG
Sbjct: 487 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 546

Query: 181 LLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQS 240
           LL YRY IHLSKEQCPK+PQ+VED+SNIPYAS V SLMYAMLCTRPD+CYS+GI+SRYQS
Sbjct: 547 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 606

Query: 241 NLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ 264
           N GRDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ
Sbjct: 607 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ 649

[Close]

BLAST of Cmc11g0304851 vs. NCBI nr
Match: TYK09500.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 449.9 bits (1156), Expect = 1.6e-122
Identity = 220/277 (79.42%), Postives = 246/277 (88.81%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           +DVKTAFLNGNLEESIY  QPEGFI+KGQEQK+ K QKSIYGLKQ SR WNIRFDTAIKS
Sbjct: 22  IDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKFQKSIYGLKQASRSWNIRFDTAIKS 81

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YGFEQNVD+ CVYK+++NS + FL+LYVDDILL+GNDVG+LTDIK+WLATQFQMKD G+A
Sbjct: 82  YGFEQNVDKPCVYKKVVNSIVAFLVLYVDDILLVGNDVGYLTDIKKWLATQFQMKDFGDA 141

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
           QYVL IQIVRNRKN+TLAMS+ SYIDK+LSRYKMQNSKKGLLPYRYGIHLSKEQCPK+PQ
Sbjct: 142 QYVLGIQIVRNRKNRTLAMSRASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 201

Query: 181 EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
           EVEDM  IPYA  VGSLMYAMLCTRPD+C+ V +VSRYQSN GRDH +AVKNILKYLRRT
Sbjct: 202 EVEDMRKIPYAFVVGSLMYAMLCTRPDICFLVEMVSRYQSNPGRDHSSAVKNILKYLRRT 261

Query: 241 KDYMLVYGSKDLILTGYTDSDFQIKMLECLHQDQFSL 278
           KDYMLVYG+KD ++        +IKMLE LH DQ+SL
Sbjct: 262 KDYMLVYGTKDTLIL----ISKRIKMLESLHHDQYSL 294

[Close]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-67
Identity = 128/262 (48.85%), Postives = 180/262 (68.70%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            +DVKTAFL+G+LEE IY  QPEGF   G++  V KL KS+YGLKQ  R W ++FD+ +KS
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   YGFEQNVDESCVY-KRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGN 120
              + +   + CVY KR   +    L+LYVDD+L++G D G +  +K  L+  F MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  AQYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSP 180
            AQ +L ++IVR R ++ L +SQ  YI+++L R+ M+N+K    P    + LSK+ CP + 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  QEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRR 240
            +E  +M+ +PY+SAVGSLMYAM+CTRPD+ ++VG+VSR+  N G++HW AVK IL+YLR 
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TKDYMLVYGSKDLILTGYTDSD 262
            T    L +G  D IL GYTD+D
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDAD 1182

[Close]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 101/273 (37.00%), Postives = 150/273 (54.95%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            MDVKTAFLNG L+E IY   P+G         V KL K+IYGLKQ +R W   F+ A+K 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   YGFEQNVDESCVY---KRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDL 120
              F  +  + C+Y   K  IN  I +++LYVDD+++   D+  + + K +L  +F+M DL
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1120

Query: 121  GNAQYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLP----YRYGIHLSKE 180
               ++ + I+I    +   + +SQ++Y+ KILS++ M+N      P      Y +  S E
Sbjct: 1121 NEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDE 1180

Query: 181  QCPKSPQEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNI 240
             C           N P  S +G LMY MLCTRPD+  +V I+SRY S    + W  +K +
Sbjct: 1181 DC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1240

Query: 241  LKYLRRTKDYMLVYGSKDLI----LTGYTDSDF 263
            L+YL+ T D  L++  K+L     + GY DSD+
Sbjct: 1241 LRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDW 1256

[Close]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 87/263 (33.08%), Postives = 137/263 (52.09%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            +DV  AFL G L + +Y  QP GF+ K +   V +L+K+IYGLKQ  R W +   T + +
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
             GF  ++ ++ ++      +I ++++YVDDIL+ GND   L    + L+ +F +K+  + 
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
             Y L I+    R  + L +SQ  Y   +L+R  M  +K    P      L+     K P 
Sbjct: 1167 HYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1226

Query: 181  EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
              E      Y   VGSL Y +  TRPD+ Y+V  +S+Y      DHW A+K +L+YL  T
Sbjct: 1227 PTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1286

Query: 241  KDY-MLVYGSKDLILTGYTDSDF 263
             D+ + +     L L  Y+D+D+
Sbjct: 1287 PDHGIFLKKGNTLSLHAYSDADW 1300

[Close]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 87/263 (33.08%), Postives = 134/263 (50.95%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            +DV  AFL G L + +Y  QP GFI K +   V KL+K++YGLKQ  R W +     + +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
             GF  +V ++ ++      +I ++++YVDDIL+ GND   L +  + L+ +F +KD    
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
             Y L I+    R    L +SQ  YI  +L+R  M  +K    P      LS     K   
Sbjct: 1184 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1243

Query: 181  EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
              E      Y   VGSL Y +  TRPD+ Y+V  +S++      +H  A+K IL+YL  T
Sbjct: 1244 PTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1303

Query: 241  KDY-MLVYGSKDLILTGYTDSDF 263
             ++ + +     L L  Y+D+D+
Sbjct: 1304 PNHGIFLKKGNTLSLHAYSDADW 1317

[Close]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-27
Identity = 81/261 (31.03%), Postives = 125/261 (47.89%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           MDV TAFLN  ++E IY  QP GF+ +     V++L   +YGLKQ    WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
            GF ++  E  +Y R  +    ++ +YVDD+L+          +K+ L   + MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
              L + I     N  + +S   YI K  S  ++   K    P    +  SK     +  
Sbjct: 121 DKFLGLNI-HQSSNGDITLSLQDYIAKAASESEINTFKLTQTP----LCNSKPLFETTSP 180

Query: 181 EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
            ++D++  PY S VG L++     RPD+ Y V ++SR+       H  + + +L+YL  T
Sbjct: 181 HLKDIT--PYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 241 KDYMLVYGS-KDLILTGYTDS 261
           +   L Y S   L LT Y D+
Sbjct: 241 RSMCLKYRSGSQLALTVYCDA 254

[Close]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129
Identity = 229/263 (87.07%), Postives = 246/263 (93.54%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
            MDVKTAFLNGNLEESIY VQPEGFI + QEQKV KLQKSIYGLKQ SR WNIRFDTAIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
            YGFEQNVDE CVYK+I+NS + FLILYVDDILLIGNDV +LTD+K+WL TQFQMKDLG A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
            QY+L IQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPK+PQ
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQ 1094

Query: 181  EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
            EVEDM NIPY+SAVGSLMYAMLCTRPD+CYSVGIVSRYQSN GRDHWTAVKNILKYLRRT
Sbjct: 1095 EVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRT 1154

Query: 241  KDYMLVYGSKDLILTGYTDSDFQ 264
            ++YMLVYG+KDLILTGYTDSDFQ
Sbjct: 1155 RNYMLVYGAKDLILTGYTDSDFQ 1177

[Close]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.7e-128
Identity = 231/263 (87.83%), Postives = 241/263 (91.63%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           MDVKT FLN NLEESIY VQPE FIQKGQEQK+ KLQKSIYGLKQ SR  NIRFDTAIKS
Sbjct: 339 MDVKTTFLNANLEESIYMVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKS 398

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YG EQNVDE CVYKRI+NST+ FL+LYVDDILLIGNDVGHL DIK+WLA QFQMKDLGNA
Sbjct: 399 YGLEQNVDEPCVYKRIMNSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNA 458

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
           QYVL +QIVRNRKNKTLAMSQTSYIDK+LSRYKM NSKKGLLPYRYGIHLSKEQCPK+PQ
Sbjct: 459 QYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQ 518

Query: 181 EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
           EVEDMSNIPYASAVGSLMY MLCTRP++CYSVGIVSR QS  GRDHWT VKNILKYLRRT
Sbjct: 519 EVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRT 578

Query: 241 KDYMLVYGSKDLILTGYTDSDFQ 264
           KDYMLVYGSKDLILTGYTD  FQ
Sbjct: 579 KDYMLVYGSKDLILTGYTDFYFQ 601

[Close]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126
Identity = 225/245 (91.84%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 19  VQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKSYGFEQNVDESCVYKRIIN 78
           VQPEGFIQKGQEQKV KL+KSIYGLKQ +R WNIRFDTAIKSYGFEQNVDE CVYKR IN
Sbjct: 2   VQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFIN 61

Query: 79  STITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLSIQIVRNRKNKTLA 138
           +T+ FL+LYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVL IQIVRN KNKTLA
Sbjct: 62  ATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTLA 121

Query: 139 MSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLM 198
           MSQTSYIDK+LSRYKMQNSKKGLLPYRYGIHLSKEQCPK+PQEVEDMSNIPYASA+GSLM
Sbjct: 122 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLM 181

Query: 199 YAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 258
           YAMLCTR D+CYSVGIV+RYQSN GRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT
Sbjct: 182 YAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 241

Query: 259 DSDFQ 264
           DSDFQ
Sbjct: 242 DSDFQ 246

[Close]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL
Match: A0A5A7V9B0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001330 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.3e-124
Identity = 228/283 (80.57%), Postives = 241/283 (85.16%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           MDVK AFLNGNLEESIY VQPEG IQKGQEQKV KLQKSIYGLKQ SR WNIRFD AIKS
Sbjct: 367 MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 426

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YGF+QNV+E CVYKRI NST+ FL+LYVD+ILLIGNDV  LTDIK+WLATQFQMKDLGNA
Sbjct: 427 YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 486

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKI--------------------LSRYKMQNSKKG 180
           QYVL IQ VRNRKNKTL MSQTSYID +                    LSRYKMQNSKKG
Sbjct: 487 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 546

Query: 181 LLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQS 240
           LL YRY IHLSKEQCPK+PQ+VED+SNIPYAS V SLMYAMLCTRPD+CYS+GI+SRYQS
Sbjct: 547 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 606

Query: 241 NLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ 264
           N GRDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ
Sbjct: 607 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQ 649

[Close]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL
Match: A0A5D3CDT9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001020 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.7e-123
Identity = 220/277 (79.42%), Postives = 246/277 (88.81%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQEQKVYKLQKSIYGLKQTSRFWNIRFDTAIKS 60
           +DVKTAFLNGNLEESIY  QPEGFI+KGQEQK+ K QKSIYGLKQ SR WNIRFDTAIKS
Sbjct: 22  IDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKFQKSIYGLKQASRSWNIRFDTAIKS 81

Query: 61  YGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNA 120
           YGFEQNVD+ CVYK+++NS + FL+LYVDDILL+GNDVG+LTDIK+WLATQFQMKD G+A
Sbjct: 82  YGFEQNVDKPCVYKKVVNSIVAFLVLYVDDILLVGNDVGYLTDIKKWLATQFQMKDFGDA 141

Query: 121 QYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQ 180
           QYVL IQIVRNRKN+TLAMS+ SYIDK+LSRYKMQNSKKGLLPYRYGIHLSKEQCPK+PQ
Sbjct: 142 QYVLGIQIVRNRKNRTLAMSRASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 201

Query: 181 EVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRT 240
           EVEDM  IPYA  VGSLMYAMLCTRPD+C+ V +VSRYQSN GRDH +AVKNILKYLRRT
Sbjct: 202 EVEDMRKIPYAFVVGSLMYAMLCTRPDICFLVEMVSRYQSNPGRDHSSAVKNILKYLRRT 261

Query: 241 KDYMLVYGSKDLILTGYTDSDFQIKMLECLHQDQFSL 278
           KDYMLVYG+KD ++        +IKMLE LH DQ+SL
Sbjct: 262 KDYMLVYGTKDTLIL----ISKRIKMLESLHHDQYSL 294

[Close]

BLAST of Cmc11g0304851 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 115.2 bits (287), Expect = 8.6e-26
Identity = 78/268 (29.10%), Postives = 135/268 (50.37%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYKVQPEGFIQKGQE----QKVYKLQKSIYGLKQTSRFWNIRFDT 60
           +D+  AFLNG+L+E IY   P G+  +  +      V  L+KSIYGLKQ SR W ++F  
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  AIKSYGFEQNVDESCVYKRIINSTITFLILYVDDILLIGNDVGHLTDIKEWLATQFQMKD 120
            +  +GF Q+  +   + +I  +    +++YVDDI++  N+   + ++K  L + F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGNAQYVLSIQIVRNRKNKTLAMSQTSYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCP 180
           LG  +Y L ++I R+     + + Q  Y   +L    +   K   +P    +  S     
Sbjct: 313 LGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH--- 372

Query: 181 KSPQEVEDMSNIPYASAVGSLMYAMLCTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKY 240
            S  +  D     Y   +G LMY  + TR D+ ++V  +S++       H  AV  IL Y
Sbjct: 373 -SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 432

Query: 241 LRRTKDYMLVYGSK-DLILTGYTDSDFQ 264
           ++ T    L Y S+ ++ L  ++D+ FQ
Sbjct: 433 IKGTVGQGLFYSSQAEMQLQVFSDASFQ 451

[Close]

BLAST of Cmc11g0304851 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 59/181 (32.60%), Postives = 94/181 (51.93%), Query Frame = 0


Query: 83  FLILYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLSIQIVRNRKNKTLAMSQT 142
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y L IQI  +     L +SQT
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 143 SYIDKILSRYKMQNSKKGLLPYRYGIHLSKEQCPKSPQEVEDMSNIPYASAVGSLMYAML 202
            Y ++IL+   M + K    P    ++ S      S  +  D S+  + S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSS-----VSTAKYPDPSD--FRSIVGALQYLTL 121

Query: 203 CTRPDVCYSVGIVSRYQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSD 262
            TRPD+ Y+V IV +         +  +K +L+Y++ T  + + ++ +  L +  + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 172

The following BLAST results are available for this feature:

BLAST of Cmc11g0304851 vs. NCBI nr


Match Name	E-value	Identity	Description
ADJ18449.1	5.1e-129	87.07	gag/pol protein, partial [Bryonia dioica]	[more]
TYK03644.1	9.6e-128	87.83	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK11050.1	6.9e-126	91.84	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0063026.1	1.1e-123	80.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK09500.1	1.6e-122	79.42	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.0e-67	48.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.5e-38	37.00	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.6e-32	33.08	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.6e-29	33.08	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	7.6e-27	31.03	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0304851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2GK51	2.5e-129	87.07	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5D3BX45	4.7e-128	87.83	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007...	[more]
A0A5D3CI71	3.3e-126	91.84	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330...	[more]
A0A5A7V9B0	5.3e-124	80.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0013...	[more]
A0A5D3CDT9	7.7e-123	79.42	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G0010...	[more]

BLAST of Cmc11g0304851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.6e-26	29.10	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.3e-13	32.60	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..163 e-value: 4.7E-41 score: 141.0
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..246
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304851.1	Cmc11g0304851.1	mRNA