Cmc11g0304821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 26171438 .. 26173246 (-)
RNA-Seq Expression	Cmc11g0304821
Synteny	Cmc11g0304821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAATTACTCAGCAAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGACACCAGAGAGTCAGAAGTTTCCTTGTCCTCCGAACAAGTAGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAGGACTTCTGCCTCCTAGGGAGATAGAATTTGCCATTGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAGTGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTCCAGCTGCAGGAGTTGCTGGACAACGGTTTCATCCGGCCCAGTGTGTCACCTTGGGAAGCCCCAATGTTGTTTGTAAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACTGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGACTTATTCGACCAGTTGCAGAAAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAATGACATTCCTAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCTCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAATTTTCATTGACGACATCTTAATTTACTCCAAGACTAAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTCTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACTGTTATTGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAAGAGGTTTGTGGAAGACTTCTCACGTATCGCCAGCCCCTTGACCCAGTTGACCAGAATGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAACTTAAGAAGAAGCTAGTGACTGCACCAGTTCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCAATGGTTTTTGCACTGAAAATATGGAGGCACTACCTGTATGGTGATAAGATACAAATTTTCACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTCGAGTTGGTGAAGGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGTTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGATCATCAAGCAAGTCCCCTTATTCAGAGATTTTGAGAAAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTGCCTCACAGTTGGCTCAGTTGTCAGTGCAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGTTTGTGTGTGCCGGAAGGCAGTGCAGTCAAGACAGAGCTGTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAATGTCTATTGGTGA

mRNA sequence

ATGAAGGCTAGTAAATTACTCAGCAAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGACACCAGAGAGTCAGAAGTTTCCTTGTCCTCCGAACAAGTAGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAGGACTTCTGCCTCCTAGGGAGATAGAATTTGCCATTGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAGTGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTCCAGCTGCAGGAGTTGCTGGACAACGGTTTCATCCGGCCCAGTGTGTCACCTTGGGAAGCCCCAATGTTGTTTGTAAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACTGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGACTTATTCGACCAGTTGCAGAAAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAATGACATTCCTAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCTCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAATTTTCATTGACGACATCTTAATTTACTCCAAGACTAAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTCTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACTGTTATTGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAAGAGGTTTGTGGAAGACTTCTCACGTATCGCCAGCCCCTTGACCCAGTTGACCAGAATGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAACTTAAGAAGAAGCTAGTGACTGCACCAGTTCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCAATGGTTTTTGCACTGAAAATATGGAGGCACTACCTGTATGGTGATAAGATACAAATTTTCACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTCGAGTTGGTGAAGGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGTTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGATCATCAAGCAAGTCCCCTTATTCAGAGATTTTGAGAAAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTGCCTCACAGTTGGCTCAGTTGTCAGTGCAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGTTTGTGTGTGCCGGAAGGCAGTGCAGTCAAGACAGAGCTGTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAATGTCTATTGGTGA

Coding sequence (CDS)

ATGAAGGCTAGTAAATTACTCAGCAAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGACACCAGAGAGTCAGAAGTTTCCTTGTCCTCCGAACAAGTAGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAGGACTTCTGCCTCCTAGGGAGATAGAATTTGCCATTGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTATAGAGTGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTCCAGCTGCAGGAGTTGCTGGACAACGGTTTCATCCGGCCCAGTGTGTCACCTTGGGAAGCCCCAATGTTGTTTGTAAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACTGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGACTTATTCGACCAGTTGCAGAAAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAATGACATTCCTAAGACGGCCTTTCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCTCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAATTTTCATTGACGACATCTTAATTTACTCCAAGACTAAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTCTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACTGTTATTGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAAGAGGTTTGTGGAAGACTTCTCACGTATCGCCAGCCCCTTGACCCAGTTGACCAGAATGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAACTTAAGAAGAAGCTAGTGACTGCACCAGTTCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCAATGGTTTTTGCACTGAAAATATGGAGGCACTACCTGTATGGTGATAAGATACAAATTTTCACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGCTGAACATGAGACAGAGGAGGTGGCTCGAGTTGGTGAAGGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGTTGACGCGCTGAGTAGGAAGGTCGCACATTCAGCAGCACTGATCATCAAGCAAGTCCCCTTATTCAGAGATTTTGAGAAAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTGCCTCACAGTTGGCTCAGTTGTCAGTGCAGCCGACCTTGAGGCAAAGGATTATCGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGTTTGTGTGTGCCGGAAGGCAGTGCAGTCAAGACAGAGCTGTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAATGTCTATTGGTGA

Protein sequence

MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIELEPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRYGHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVLETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAHSAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNVYW

Homology

[Close]

BLAST of Cmc11g0304821 vs. NCBI nr
Match: KAA0037369.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 553/602 (91.86%), Postives = 580/602 (96.35%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PPRE++FAIEL
Sbjct: 393 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 452

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 453 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 512

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 513 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 572

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+VMSFGLT A AVFMDLMNR+FKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 573 GHYEFVVMSFGLTKAPAVFMDLMNRLFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 632

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 633 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 692

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVEDFSRIA+PLTQLTR G PFVWSPACESSFQELK+KLVTAPVLTVPDGSG
Sbjct: 693 GLAGYYRRFVEDFSRIANPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 752

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 753 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 812

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 813 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 872

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL +DFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYLVEKRR+
Sbjct: 873 SAALITKQTPLLKDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 932

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VETGQGEDFSISSDDGLMFEGRLCVPE SA+KTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 933 VETGQGEDFSISSDDGLMFEGRLCVPEDSAIKTELLTEAHSSPFTMHPGSTKMYQDLRSV 992

Query: 601 YW 603
           YW
Sbjct: 993 YW 994

[Close]

BLAST of Cmc11g0304821 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/602 (91.69%), Postives = 579/602 (96.18%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PP+E++FAIEL
Sbjct: 64  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFAIEL 123

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPY++APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+V+SFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 244 GHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVED SRIASPLTQLTR GTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV D+LSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAH 543

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL RDFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 603

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VETGQGEDFSISSDDGLMFEGRLCVPE SAVKTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 604 VETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 663

Query: 601 YW 603
           YW
Sbjct: 664 YW 665

[Close]

BLAST of Cmc11g0304821 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 554/602 (92.03%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1    MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
            MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVF DELPGL PPRE++FAIEL
Sbjct: 533  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61   EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
            EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 593  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 653  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181  GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
            GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 713  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241  ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
            ETL+AN LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EI+SFL
Sbjct: 773  ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301  GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
            GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG
Sbjct: 833  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 892

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK +EQNYPTHDLEL A+VFALKIWRHYLY
Sbjct: 893  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLY 952

Query: 421  GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
            G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 953  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1012

Query: 481  SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
            SA LI KQ PL RDFE+AEIAVSVGEV SQLAQLSVQPTLRQ+II AQLNDPYLVEKRR+
Sbjct: 1013 SAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 1072

Query: 541  VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
            VETGQGEDFSISSDDGLMFEGRLCVPE SAV+TELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 1073 VETGQGEDFSISSDDGLMFEGRLCVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSV 1132

Query: 601  YW 603
            YW
Sbjct: 1133 YW 1134

[Close]

BLAST of Cmc11g0304821 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 554/602 (92.03%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1    MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
            MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PPRE++FAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
            EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
            GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
            ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
            GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACESSFQELK+KLV APVLTVPDGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
            G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
            SAALI KQ PL RDFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

Query: 541  VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
            VETGQGEDFSIS DDGLMFEGRLCVPE SAVKTELLTEAHSS FTMHPGSTKMYQDLR+V
Sbjct: 1038 VETGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSV 1097

Query: 601  YW 603
            YW
Sbjct: 1098 YW 1099

[Close]

BLAST of Cmc11g0304821 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 553/602 (91.86%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS GTWGILASVVD RE EVSLSSE VVREYPDVFPD+LPGL PPRE++FAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL RDFE+AEIAVSVGEV +QLAQL+VQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VET QGEDFSISSDDGLMFEGRLCVPE +AVKTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 604 VETEQGEDFSISSDDGLMFEGRLCVPEDNAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 663

Query: 601 YW 603
           YW
Sbjct: 664 YW 665

[Close]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-87
Identity = 161/411 (39.17%), Postives = 255/411 (62.04%), Query Frame = 0


Query: 72  YRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFV-KKKDGS----MRLCIDYRELN 131
           Y    A  +E++ Q+Q++L+ G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 132 KVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRYGHYEFI 191
           ++TV +R+P+P +D++  +L +   F+ IDL  G+HQ+ +    + KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 192 VMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVLETLQAN 251
            M FGL NA A F   MN + +  L+   ++++DDI+++S +  EH + L  V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 252 RLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFLGLAGYY 311
            L  +  KCEF  ++ +FLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 312 KRFVEDFSRIASPLTQLTRMGTPF-VWSPACESSFQELKKKLVTAPVLTVPDGSGSFVIY 371
           ++F+ +F+ IA P+T+  +        +P  +S+F++LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 372 SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYGDKIQ 431
           +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 432 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSR 477
           I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N V DALSR
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-84
Identity = 159/418 (38.04%), Postives = 248/418 (59.33%), Query Frame = 0


Query: 65  APISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKD-----GSMRLC 124
           +PI    Y +A     E++ Q+QE+L+ G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSR 184
           IDYR+LN++T+ +RYP+P +D++  +L K   F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 185 YGHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQV 244
            GHYE++ M FGL NA A F   MN + +  L+   ++++DDI+I+S +  EH   ++ V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 245 LETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSF 304
              L    L  +  KCEF  K+ +FLGH+V+ +G+  +P K++A+ ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 305 LGLAGYYKRFVEDFSRIASPLTQLTRMGTPF-VWSPACESSFQELKKKLVTAPVLTVPDG 364
           LGL GYY++F+ +++ IA P+T   +  T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 365 SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHY 424
              FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 425 LYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSR 477
           L G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N V DALSR
Sbjct: 565 LLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-83
Identity = 163/465 (35.05%), Postives = 269/465 (57.85%), Query Frame = 0


Query: 36  EYPDVFPDELPGLLPPREIEFAIELEPGT---APISRAPYRVAPAELKELKVQLQELLDN 95
           E+P +F   L G+     +E A++ E  T    PI    Y        E++ Q+ ELL +
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 96  GFIRPSVSPWEAPMLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 155
           G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 156 KATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRYGHYEFIVMSFGLTNASAVFMDLMNRVF 215
            A  F+ +DL SG+HQ+ ++++DIPKTAF +  G YEF+ + FGL NA A+F  +++ + 
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 216 KDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVLETLQANRLYAKFSKCEFWLKKVSFLGH 275
           ++ +     ++IDDI+++S+    H ++LR VL +L    L     K  F   +V FLG+
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 276 VVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFLGLAGYYKRFVEDFSRIASPLTQLTR-- 335
           +V+++G+  DP K+ A++  P P++V E++ FLG+  YY++F++D++++A PLT LTR  
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGL 393

Query: 336 ---------MGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 395
                       P         SF +LK  L ++ +L  P  +  F + +DAS   +G V
Sbjct: 394 YANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAV 453

Query: 396 LMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLYG-DKIQIFTDHK 455
           L Q    + + +AY SR L   E+NY T + E+ A++++L   R YLYG   I+++TDH+
Sbjct: 454 LSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQ 513

Query: 456 SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSR 477
            L +    +  N + +RW   +++Y+CE++Y PGK+NVV DALSR
Sbjct: 514 PLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 304.3 bits (778), Expect = 3.1e-81
Identity = 168/443 (37.92%), Postives = 255/443 (57.56%), Query Frame = 0


Query: 49   LPPR-------EIEFAIELEPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSP 108
            LPPR        ++  IE++PG       PY V     +E+   +Q+LLDN FI PS SP
Sbjct: 598  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 109  WEAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGY 168
              +P++ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGY
Sbjct: 658  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 169  HQLRIRDNDIPKTAFRSRYGHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDD 228
            HQ+ +   D  KTAF +  G YE+ VM FGL NA + F   M   F+D    FV +++DD
Sbjct: 718  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 229  ILIYSKTKAEHEEHLRQVLETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKI 288
            ILI+S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K 
Sbjct: 778  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 289  EAVTNWPRPSTVIEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQ 348
             A+ ++P P TV + + FLG+  YY+RF+ + S+IA P+     +     W+   + + +
Sbjct: 838  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLF--ICDKSQWTEKQDKAIE 897

Query: 349  ELKKKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHE 408
            +LK  L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S +
Sbjct: 898  KLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQ 957

Query: 409  QNYPTHDLELAAMVFALKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 468
            +NYP  +LEL  ++ AL  +R+ L+G    + TDH SL     + E   R +RWL+ +  
Sbjct: 958  KNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLAT 1017

Query: 469  YDCEILYHPGKANVVVDALSRKV 479
            YD  + Y  G  NVV DA+SR +
Sbjct: 1018 YDFTLEYLAGPKNVVADAISRAI 1036

[Close]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 303.9 bits (777), Expect = 4.0e-81
Identity = 169/443 (38.15%), Postives = 254/443 (57.34%), Query Frame = 0


Query: 49   LPPR-------EIEFAIELEPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSP 108
            LPPR        ++  IE++PG       PY V     +E+   +Q+LLDN FI PS SP
Sbjct: 572  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 109  WEAPMLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGY 168
              +P++ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGY
Sbjct: 632  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 169  HQLRIRDNDIPKTAFRSRYGHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDD 228
            HQ+ +   D  KTAF +  G YE+ VM FGL NA + F   M   F+D    FV +++DD
Sbjct: 692  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 229  ILIYSKTKAEHEEHLRQVLETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKI 288
            ILI+S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K 
Sbjct: 752  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 289  EAVTNWPRPSTVIEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQ 348
             A+ ++P P TV + + FLG+  YY+RF+ + S+IA P+     +     W+   + +  
Sbjct: 812  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLF--ICDKSQWTEKQDKAID 871

Query: 349  ELKKKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHE 408
            +LK  L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S +
Sbjct: 872  KLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQ 931

Query: 409  QNYPTHDLELAAMVFALKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKD 468
            +NYP  +LEL  ++ AL  +R+ L+G    + TDH SL     + E   R +RWL+ +  
Sbjct: 932  KNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLAT 991

Query: 469  YDCEILYHPGKANVVVDALSRKV 479
            YD  + Y  G  NVV DA+SR V
Sbjct: 992  YDFTLEYLAGPKNVVADAISRAV 1010

[Close]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL
Match: A0A5A7T7M0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00720 PE=4 SV=1)

HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 553/602 (91.86%), Postives = 580/602 (96.35%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PPRE++FAIEL
Sbjct: 393 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 452

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 453 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 512

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 513 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 572

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+VMSFGLT A AVFMDLMNR+FKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 573 GHYEFVVMSFGLTKAPAVFMDLMNRLFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 632

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 633 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 692

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVEDFSRIA+PLTQLTR G PFVWSPACESSFQELK+KLVTAPVLTVPDGSG
Sbjct: 693 GLAGYYRRFVEDFSRIANPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 752

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 753 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 812

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 813 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 872

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL +DFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYLVEKRR+
Sbjct: 873 SAALITKQTPLLKDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 932

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VETGQGEDFSISSDDGLMFEGRLCVPE SA+KTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 933 VETGQGEDFSISSDDGLMFEGRLCVPEDSAIKTELLTEAHSSPFTMHPGSTKMYQDLRSV 992

Query: 601 YW 603
           YW
Sbjct: 993 YW 994

[Close]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 554/602 (92.03%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1    MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
            MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVF DELPGL PPRE++FAIEL
Sbjct: 533  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61   EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
            EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 593  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 653  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181  GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
            GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 713  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241  ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
            ETL+AN LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EI+SFL
Sbjct: 773  ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301  GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
            GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG
Sbjct: 833  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 892

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK +EQNYPTHDLEL A+VFALKIWRHYLY
Sbjct: 893  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLY 952

Query: 421  GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
            G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 953  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1012

Query: 481  SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
            SA LI KQ PL RDFE+AEIAVSVGEV SQLAQLSVQPTLRQ+II AQLNDPYLVEKRR+
Sbjct: 1013 SAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 1072

Query: 541  VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
            VETGQGEDFSISSDDGLMFEGRLCVPE SAV+TELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 1073 VETGQGEDFSISSDDGLMFEGRLCVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSV 1132

Query: 601  YW 603
            YW
Sbjct: 1133 YW 1134

[Close]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 552/602 (91.69%), Postives = 579/602 (96.18%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PP+E++FAIEL
Sbjct: 64  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFAIEL 123

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPY++APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+V+SFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 244 GHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVED SRIASPLTQLTR GTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV D+LSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAH 543

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL RDFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 603

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VETGQGEDFSISSDDGLMFEGRLCVPE SAVKTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 604 VETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 663

Query: 601 YW 603
           YW
Sbjct: 664 YW 665

[Close]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 554/602 (92.03%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1    MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
            MKASKLLS+GTWGILASVVD RE EVSLSSE VVREYPDVFPDELPGL PPRE++FAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
            EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
            GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
            ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
            GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACESSFQELK+KLV APVLTVPDGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
            G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
            SAALI KQ PL RDFE+AEIAVSVGEV +QLAQLSVQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

Query: 541  VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
            VETGQGEDFSIS DDGLMFEGRLCVPE SAVKTELLTEAHSS FTMHPGSTKMYQDLR+V
Sbjct: 1038 VETGQGEDFSISFDDGLMFEGRLCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSV 1097

Query: 601  YW 603
            YW
Sbjct: 1098 YW 1099

[Close]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 553/602 (91.86%), Postives = 578/602 (96.01%), Query Frame = 0


Query: 1   MKASKLLSKGTWGILASVVDTRESEVSLSSEQVVREYPDVFPDELPGLLPPREIEFAIEL 60
           MKASKLLS GTWGILASVVD RE EVSLSSE VVREYPDVFPD+LPGL PPRE++FAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  EPGTAPISRAPYRVAPAELKELKVQLQELLDNGFIRPSVSPWEAPMLFVKKKDGSMRLCI 120
           EPGTAPISRAPYR+APAELKELKVQLQELLD GFIRPSVSPW AP+LFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQKATVFSKIDLRSGYHQLRIRDNDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFIVMSFGLTNASAVFMDLMNRVFKDFLDSFVIIFIDDILIYSKTKAEHEEHLRQVL 240
           GHYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVI+FIDDILIYSKT+AEHEEHL QVL
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLQANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVIEIRSFL 300
           ETL+AN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV EIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSG 360
           GLAGYY+RFVEDFSRIASPLTQLTR GTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHYLY 420
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAA+VFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAH 480
           G+KIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 SAALIIKQVPLFRDFEKAEIAVSVGEVASQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRL 540
           SAALI KQ PL RDFE+AEIAVSVGEV +QLAQL+VQPTLRQ+II AQLNDPYL EKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

Query: 541 VETGQGEDFSISSDDGLMFEGRLCVPEGSAVKTELLTEAHSSPFTMHPGSTKMYQDLRNV 600
           VET QGEDFSISSDDGLMFEGRLCVPE +AVKTELLTEAHSSPFTMHPGSTKMYQDLR+V
Sbjct: 604 VETEQGEDFSISSDDGLMFEGRLCVPEDNAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 663

Query: 601 YW 603
           YW
Sbjct: 664 YW 665

[Close]

BLAST of Cmc11g0304821 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 4.9e-26
Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 235 HLRQVLETLQANRLYAKFSKCEFWLKKVSFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 294
           HL  VL+  + ++ YA   KC F   ++++LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VIEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRMGTPFVWSPACESSFQELKKKLVTAPV 354
             E+R FLGL GYY+RFV+++ +I  PLT+L +  +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 355 LTVPDGSGSFV 364
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc11g0304821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037369.1	0.0e+00	91.86	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	0.0e+00	91.69	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	0.0e+00	92.03	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	0.0e+00	92.03	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	0.0e+00	91.86	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.9e-87	39.17	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.3e-84	38.04	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.5e-83	35.05	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	3.1e-81	37.92	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	4.0e-81	38.15	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0304821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7M0	0.0e+00	91.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7TG62	0.0e+00	92.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7TVN9	0.0e+00	91.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7V4E4	0.0e+00	92.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7V6R2	0.0e+00	91.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]

BLAST of Cmc11g0304821 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.9e-26	41.98	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 533..602 e-value: 6.5E-5 score: 25.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 54..194 e-value: 2.8E-92 score: 309.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..474
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 66..474
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 8.5194E-94 score: 283.717
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 363..478 e-value: 4.80884E-58 score: 188.47
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 109..268 e-value: 5.3E-26 score: 91.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 10.023561
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 2.8E-92 score: 309.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 279..369 e-value: 4.1E-30 score: 105.6
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 360..456 e-value: 1.2E-33 score: 115.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304821.1	Cmc11g0304821.1	mRNA