Cmc11g0304781 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304781
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 26148850 .. 26150709 (+)
RNA-Seq Expression	Cmc11g0304781
Synteny	Cmc11g0304781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAAGGCTGAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTCGATAAGGGATTCATTCGATCGAGTGTGTCACCTTGGGGTGCGCCAGCTTTATTTGTTAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAAGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTTATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGAGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGCTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCAAGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGACCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGAACAGTTTCCAAAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCAGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTATACATGATTTAGAGTTGGAAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGCTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGTTAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGGTCTTAGTAGAAAGGCATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGAGCAGTCACTATGCAGTTAGCCCACTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACAATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGACGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACTCCTTTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGGTAGCAGAATTTGTTAG

mRNA sequence

ATGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAAGGCTGAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTCGATAAGGGATTCATTCGATCGAGTGTGTCACCTTGGGGTGCGCCAGCTTTATTTGTTAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAAGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTTATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGAGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGCTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCAAGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGACCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGAACAGTTTCCAAAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCAGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTATACATGATTTAGAGTTGGAAGCAGTGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGGTCTTAGTAGAAAGGCATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGAGCAGTCACTATGCAGTTAGCCCACTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACAATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGACGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACTCCTTTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGGTAGCAGAATTTGTTAG

Coding sequence (CDS)

ATGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAAGGCTGAAAGAACTAAAAGTGCAGTTACAGGAGTTGCTCGATAAGGGATTCATTCGATCGAGTGTGTCACCTTGGGGTGCGCCAGCTTTATTTGTTAAGAAGGATGGATCGATGCGTCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAAGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTTATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGAGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGCTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCAAGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGACCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGAACAGTTTCCAAAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCAGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTATACATGATTTAGAGTTGGAAGCAGTGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGGTCTTAGTAGAAAGGCATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGAGCAGTCACTATGCAGTTAGCCCACTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACAATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGACGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACTCCTTTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGGTAGCAGAATTTGTTAG

Protein sequence

MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFVKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAVDYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRGSRIC

Homology

[Close]

BLAST of Cmc11g0304781 vs. NCBI nr
Match: KAA0047433.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1069.7 bits (2765), Expect = 8.8e-309
Identity = 543/577 (94.11%), Postives = 550/577 (95.32%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 983  LPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 1042

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 1043 VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 1102

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Sbjct: 1103 GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 1162

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 1163 TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 1222

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLR+VLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 1223 EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 1282

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 1283 SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 1342

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 1343 TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVRRWLE 1402

Query: 421  ---DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 480
               DYDCEILYHPGKANVVAD LSRK SHSAALITRQAPLHRDLERAEIAVSVG VTMQL
Sbjct: 1403 LVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQL 1462

Query: 481  AHLTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAV 540
            A LTVQPTLRQRIIDAQ N+PYLVEKRGLAEAGQ VEFSISSDGGLLFER LCVPSDSAV
Sbjct: 1463 AQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAV 1522

Query: 541  KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 569
            KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR
Sbjct: 1523 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 1559

[Close]

BLAST of Cmc11g0304781 vs. NCBI nr
Match: KAA0062245.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1058.1 bits (2735), Expect = 2.6e-305
Identity = 537/577 (93.07%), Postives = 545/577 (94.45%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGIL SVVDTRE DVSLSSEPVVRDYPDVFPEELPGLP HRE
Sbjct: 600  LPQVISAIRASKLLSQGTWGILTSVVDTREADVSLSSEPVVRDYPDVFPEELPGLPLHRE 659

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 660  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 719

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 720  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 779

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 780  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 839

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PST+
Sbjct: 840  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTI 899

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 900  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 959

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDA KKGLGCVLMQQGKVV YASRQLKSHEQNYP HDLEL AV     
Sbjct: 960  TVPDGSGSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLE 1019

Query: 421  ---DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 480
               DYDCEILYHPGKANVVAD LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQL
Sbjct: 1020 LVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 1079

Query: 481  AHLTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAV 540
            A LTVQPTLRQRIIDAQSN+PYLVEKRGLAEAGQ  EFS+SSDGGLLFER LCVPSDSAV
Sbjct: 1080 AQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAV 1139

Query: 541  KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 569
            KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR
Sbjct: 1140 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 1176

[Close]

BLAST of Cmc11g0304781 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.1e-303
Identity = 542/615 (88.13%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 754  LPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHRE 813

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 814  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 873

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 874  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 933

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 934  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 993

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 994  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 1053

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQ LKQKLVTAPVL
Sbjct: 1054 SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVL 1113

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 1114 TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 1173

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 1174 IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 1233

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 1234 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1293

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAEAGQT EFS+SSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKM
Sbjct: 1294 LVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 1353

[Close]

BLAST of Cmc11g0304781 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.1e-303
Identity = 541/615 (87.97%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHRE
Sbjct: 534  LPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHRE 593

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 594  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 653

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 654  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 713

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTE EHE
Sbjct: 714  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHE 773

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKFLKCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 774  EHLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 833

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 834  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 893

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 894  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 953

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 954  IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 1013

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 1014 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1073

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAE GQ VEFS+SSDGGLLFER LCVPSDSA+KTELLSEAHSSPFSMHPGSTKM
Sbjct: 1074 LVEKRGLAEVGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKM 1133

[Close]

BLAST of Cmc11g0304781 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1050.4 bits (2715), Expect = 5.5e-303
Identity = 540/615 (87.80%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 500  LPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHRE 559

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 560  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 619

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 620  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 679

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 680  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 739

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 740  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 799

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 800  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 859

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 860  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 919

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 920  IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 979

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 980  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1039

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAEAGQ VEFS+SSDGGLLFER LCVPSDS VKTELLSEAHSSPFSMHPGSTKM
Sbjct: 1040 LVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKM 1099

[Close]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-68
Identity = 133/358 (37.15%), Postives = 209/358 (58.38%), Query Frame = 0


Query: 73  PISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFVKKD------GSMRLCI 132
           PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V K          R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 133 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 192
           DYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 193 GHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHEEHLRMVL 252
           GHYE++ M FGL NAPA F   MN + R  L+   +V++ DI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 253 QTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTVSEVRSFL 312
             L D  L  +  KCEF  K+ +FLGH+V+   +  +P K++A+ S+  P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 313 GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACENSFQNLKQKLVTAPVLTVPDGS 372
           GL GYYR+F+ N++ IA P+T   +K       K     +F+ LK  ++  P+L +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 373 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAVDYDCEILYH 424
             FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+ +  +   H
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRH 563

[Close]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-68
Identity = 164/577 (28.42%), Postives = 283/577 (49.05%), Query Frame = 0


Query: 50  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPW 109
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 110 GAPALFV-KKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYH 169
             P +FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 170 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDI 229
            +R++ GD  K AFR   G +E++VM +G+  APA F   +N +  E  ++ V+ ++ DI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 230 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIE 289
           LI+SK+E+EH +H++ VLQ L++  L     KCEF   Q+ F+G+ +S+   +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 290 AVTSWTQPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQN 349
            V  W QP    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 350 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 409
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 410 YPIHDLELEAV------------------------------------------------- 469
           Y + D E+ A+                                                 
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 470 -DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAH 529
            D++ EI Y PG AN +AD LSR       ++    P+ +D E   I          +  
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 530 LTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLF--ERLLCVPSDSAV 569
           +++    + +++   +N+  L+    L    + VE +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-68
Identity = 164/577 (28.42%), Postives = 283/577 (49.05%), Query Frame = 0


Query: 50  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPW 109
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 110 GAPALFV-KKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYH 169
             P +FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 170 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDI 229
            +R++ GD  K AFR   G +E++VM +G+  APA F   +N +  E  ++ V+ ++ DI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 230 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIE 289
           LI+SK+E+EH +H++ VLQ L++  L     KCEF   Q+ F+G+ +S+   +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 290 AVTSWTQPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQN 349
            V  W QP    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 350 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 409
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 410 YPIHDLELEAV------------------------------------------------- 469
           Y + D E+ A+                                                 
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 470 -DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAH 529
            D++ EI Y PG AN +AD LSR       ++    P+ +D E   I          +  
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 530 LTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLF--ERLLCVPSDSAV 569
           +++    + +++   +N+  L+    L    + VE +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-68
Identity = 164/577 (28.42%), Postives = 283/577 (49.05%), Query Frame = 0


Query: 50  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPW 109
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 110 GAPALFV-KKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYH 169
             P +FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 170 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDI 229
            +R++ GD  K AFR   G +E++VM +G+  APA F   +N +  E  ++ V+ ++ DI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 230 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIE 289
           LI+SK+E+EH +H++ VLQ L++  L     KCEF   Q+ F+G+ +S+   +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 290 AVTSWTQPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQN 349
            V  W QP    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 350 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 409
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 410 YPIHDLELEAV------------------------------------------------- 469
           Y + D E+ A+                                                 
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 470 -DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAH 529
            D++ EI Y PG AN +AD LSR       ++    P+ +D E   I          +  
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 530 LTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLF--ERLLCVPSDSAV 569
           +++    + +++   +N+  L+    L    + VE +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-68
Identity = 164/577 (28.42%), Postives = 283/577 (49.05%), Query Frame = 0


Query: 50  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPW 109
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 110 GAPALFV-KKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYH 169
             P +FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 170 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDI 229
            +R++ GD  K AFR   G +E++VM +G+  APA F   +N +  E  ++ V+ ++ DI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 230 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIE 289
           LI+SK+E+EH +H++ VLQ L++  L     KCEF   Q+ F+G+ +S+   +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 290 AVTSWTQPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQN 349
            V  W QP    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 350 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 409
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 410 YPIHDLELEAV------------------------------------------------- 469
           Y + D E+ A+                                                 
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 470 -DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAH 529
            D++ EI Y PG AN +AD LSR       ++    P+ +D E   I          +  
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 530 LTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLF--ERLLCVPSDSAV 569
           +++    + +++   +N+  L+    L    + VE +I    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL
Match: A0A5A7TV57 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00240 PE=4 SV=1)

HSP 1 Score: 1069.7 bits (2765), Expect = 4.3e-309
Identity = 543/577 (94.11%), Postives = 550/577 (95.32%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 983  LPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 1042

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 1043 VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 1102

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Sbjct: 1103 GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 1162

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 1163 TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 1222

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLR+VLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 1223 EHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 1282

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 1283 SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 1342

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 1343 TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVRRWLE 1402

Query: 421  ---DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 480
               DYDCEILYHPGKANVVAD LSRK SHSAALITRQAPLHRDLERAEIAVSVG VTMQL
Sbjct: 1403 LVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGPVTMQL 1462

Query: 481  AHLTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAV 540
            A LTVQPTLRQRIIDAQ N+PYLVEKRGLAEAGQ VEFSISSDGGLLFER LCVPSDSAV
Sbjct: 1463 AQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAV 1522

Query: 541  KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 569
            KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR
Sbjct: 1523 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 1559

[Close]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL
Match: A0A5A7V8L8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 1.3e-305
Identity = 537/577 (93.07%), Postives = 545/577 (94.45%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGIL SVVDTRE DVSLSSEPVVRDYPDVFPEELPGLP HRE
Sbjct: 600  LPQVISAIRASKLLSQGTWGILTSVVDTREADVSLSSEPVVRDYPDVFPEELPGLPLHRE 659

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 660  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 719

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 720  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 779

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 780  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 839

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PST+
Sbjct: 840  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTI 899

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 900  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 959

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDA KKGLGCVLMQQGKVV YASRQLKSHEQNYP HDLEL AV     
Sbjct: 960  TVPDGSGSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLE 1019

Query: 421  ---DYDCEILYHPGKANVVADGLSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 480
               DYDCEILYHPGKANVVAD LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQL
Sbjct: 1020 LVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQL 1079

Query: 481  AHLTVQPTLRQRIIDAQSNNPYLVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAV 540
            A LTVQPTLRQRIIDAQSN+PYLVEKRGLAEAGQ  EFS+SSDGGLLFER LCVPSDSAV
Sbjct: 1080 AQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAV 1139

Query: 541  KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 569
            KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR
Sbjct: 1140 KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR 1176

[Close]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 5.4e-304
Identity = 541/615 (87.97%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHRE
Sbjct: 534  LPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHRE 593

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 594  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 653

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 654  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 713

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTE EHE
Sbjct: 714  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHE 773

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKFLKCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 774  EHLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 833

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 834  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 893

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 894  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 953

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 954  IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 1013

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 1014 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1073

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAE GQ VEFS+SSDGGLLFER LCVPSDSA+KTELLSEAHSSPFSMHPGSTKM
Sbjct: 1074 LVEKRGLAEVGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKM 1133

[Close]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 5.4e-304
Identity = 542/615 (88.13%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 754  LPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHRE 813

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 814  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 873

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 874  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 933

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 934  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 993

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 994  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 1053

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQ LKQKLVTAPVL
Sbjct: 1054 SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVL 1113

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 1114 TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 1173

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 1174 IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 1233

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 1234 LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1293

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAEAGQT EFS+SSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKM
Sbjct: 1294 LVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 1353

[Close]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1050.4 bits (2715), Expect = 2.7e-303
Identity = 540/615 (87.80%), Postives = 549/615 (89.27%), Query Frame = 0


Query: 1    MPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHRE 60
            +PQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHRE
Sbjct: 500  LPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHRE 559

Query: 61   VEFAIELEPGTVPISRAPYRMAPARLKELKVQLQELLDKGFIRSSVSPWGAPALFV-KKD 120
            VEFAIELEPGTVPISRAPYRMAPA LKELKVQLQELLDKGFIR SVSPWGAP LFV KKD
Sbjct: 560  VEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD 619

Query: 121  GSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK 180
            GSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Sbjct: 620  GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK 679

Query: 181  TAFRSRYGHYEFIVMSFGLMNAPAVFMDLMNRVFREFLDTFVIVFIYDILIYSKTEAEHE 240
            TAFRSRYGHYEFIVMSFGL NAPAVFMDLMNRVFREFLDTFVIVFI DILIYSKTEAEHE
Sbjct: 680  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 739

Query: 241  EHLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLGHVVSKARVSVDPTKIEAVTSWTQPSTV 300
            EHLRMVLQTLRDNKLYAKF KCEFWLKQ+SFLGHVVSKA VSVDP KIEAVT WT+PSTV
Sbjct: 740  EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV 799

Query: 301  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPVL 360
            SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE+SFQNLKQKLVTAPVL
Sbjct: 800  SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL 859

Query: 361  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPIHDLELEAV----- 420
            TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP HDLEL AV     
Sbjct: 860  TVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 919

Query: 421  -----------------------------------------DYDCEILYHPGKANVVADG 480
                                                     DYDCEILYHPGKANVVAD 
Sbjct: 920  IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 979

Query: 481  LSRKASHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAHLTVQPTLRQRIIDAQSNNPY 540
            LSRK SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA LTVQPTLRQRIIDAQSN+PY
Sbjct: 980  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY 1039

Query: 541  LVEKRGLAEAGQTVEFSISSDGGLLFERLLCVPSDSAVKTELLSEAHSSPFSMHPGSTKM 569
            LVEKRGLAEAGQ VEFS+SSDGGLLFER LCVPSDS VKTELLSEAHSSPFSMHPGSTKM
Sbjct: 1040 LVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKM 1099

[Close]

BLAST of Cmc11g0304781 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 4.0e-25
Identity = 57/131 (43.51%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 241 HLRMVLQTLRDNKLYAKFLKCEFWLKQLSFLG--HVVSKARVSVDPTKIEAVTSWTQPST 300
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S   VS DP K+EA+  W +P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 301 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACENSFQNLKQKLVTAPV 360
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 361 LTVPDGSGSFV 370
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc11g0304781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047433.1	8.8e-309	94.11	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062245.1	2.6e-305	93.07	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	1.1e-303	88.13	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	1.1e-303	87.97	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0048687.1	5.5e-303	87.80	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.3e-68	37.15	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	2.8e-68	28.42	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.8e-68	28.42	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.8e-68	28.42	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.8e-68	28.42	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0304781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TV57	4.3e-309	94.11	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V8L8	1.3e-305	93.07	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE...	[more]
A0A5A7T190	5.4e-304	87.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5D3BPI1	5.4e-304	88.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	2.7e-303	87.80	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Cmc11g0304781 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.0e-25	43.51	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 529..568 e-value: 2.0E-8 score: 34.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 140..275 e-value: 2.9E-86 score: 290.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 285..375 e-value: 1.3E-31 score: 110.4
None	No IPR available	GENE3D	1.10.340.70		coord: 495..571 e-value: 1.2E-9 score: 40.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 62..200 e-value: 2.9E-86 score: 290.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 73..415
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 73..415
None	No IPR available	CDD	cd01647	RT_LTR	coord: 100..275 e-value: 1.3455E-88 score: 269.465
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 338..416 e-value: 1.8E-23 score: 82.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 117..274 e-value: 1.2E-23 score: 83.8
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 40..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304781.1	Cmc11g0304781.1	mRNA