Cmc11g0304221 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304221
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 25783200 .. 25784444 (-)
RNA-Seq Expression	Cmc11g0304221
Synteny	Cmc11g0304221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCAACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAAAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGGTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGACTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAATGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTAGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAAAGCCATGAGCAGAACTACCCTACACATGACCTAGAGTTGGCAGCAGTGGTTTTCACTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCATGGATCATAAGAGCTTGAAATACTTCTTTACTCAAAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAAATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGTAG

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCAACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAAAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGGTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGACTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAATGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTAGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAAAGCCATGAGCAGAACTACCCTACACATGACCTAGAGTTGGCAGCAGTGGTTTTCACTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCATGGATCATAAGAGCTTGAAATACTTCTTTACTCAAAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAAATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGTAG

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCAACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAAAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGGTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGACTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAATGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTAGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAAAGCCATGAGCAGAACTACCCTACACATGACCTAGAGTTGGCAGCAGTGGTTTTCACTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCATGGATCATAAGAGCTTGAAATACTTCTTTACTCAAAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAAATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGTAG

Protein sequence

MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Homology

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BLAST of Cmc11g0304221 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 825.9 bits (2132), Expect = 1.6e-235
Identity = 408/414 (98.55%), Postives = 409/414 (98.79%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

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BLAST of Cmc11g0304221 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 823.9 bits (2127), Expect = 6.0e-235
Identity = 407/414 (98.31%), Postives = 408/414 (98.55%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTR G PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 940 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

[Close]

BLAST of Cmc11g0304221 vs. NCBI nr
Match: AAO45752.1 (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 823.5 bits (2126), Expect = 7.9e-235
Identity = 406/414 (98.07%), Postives = 409/414 (98.79%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY+FIVMSFGLT
Sbjct: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 181 KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 241 SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 414

[Close]

BLAST of Cmc11g0304221 vs. NCBI nr
Match: KAA0058399.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 820.5 bits (2118), Expect = 6.7e-234
Identity = 405/414 (97.83%), Postives = 408/414 (98.55%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 811  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 870

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 871  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 930

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLR+NKLYAKFS
Sbjct: 931  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRNNKLYAKFS 990

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 991  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1050

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1051 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1110

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHE+NYPTHDLELAAVVF LKIWRHYLYGE IQIF DHKSL
Sbjct: 1111 GCVLMQQGKVVAYASRQLKSHEKNYPTHDLELAAVVFALKIWRHYLYGENIQIFTDHKSL 1170

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1171 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1224

[Close]

BLAST of Cmc11g0304221 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 820.1 bits (2117), Expect = 8.7e-234
Identity = 405/414 (97.83%), Postives = 406/414 (98.07%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

[Close]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.4e-87
Identity = 162/403 (40.20%), Postives = 251/403 (62.28%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIQPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G I+ S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +  E V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 246
           CEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIATPLTQLTRNGVPFVWSKACEDS-FQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 306
            IA P+T+  +  +    +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 366
           G VL Q G  ++Y SR L  HE NY T + EL A+V+  K +RHYL G   +I  DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 8.3e-86
Identity = 157/402 (39.05%), Postives = 242/402 (60.20%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G I+ S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +E + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR 247
           EF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FLGL GYYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IATPLTQLTRNGVPFVWSK-ACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG 307
           IA P+T   +        K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSLK 367
            VL Q G  +++ SR L  HE NY   + EL A+V+  K +RHYL G +  I  DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           +    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 581 WLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.1e-82
Identity = 155/417 (37.17%), Postives = 250/417 (59.95%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIQPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+ ELL  G I+PS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ +K+ D+PKTAF +  G YEF+ + FGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKC 187
           PA+F  +++ + RE +     V+IDDI+++S+    H ++LR+VL +L    L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR 247
            F   QV FLG++V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F++++++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 IATPLTQLTR-----------NGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVI 307
           +A PLT LTR           + VP    +    SF  LK  L ++ +L  P  +  F +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLY 367
            +DAS   +G VL Q    + + +AY SR L   E+NY T + E+ A++++L   R YLY
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

Query: 368 GE-KIQIFMDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           G   I+++ DH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Sbjct: 498 GAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 3.7e-78
Identity = 159/405 (39.26%), Postives = 239/405 (59.01%), Query Frame = 0


Query: 7    KELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL 186
               M   FR+    FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  KQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP 246
            ++  FLG+ +    ++    K  A+  +  P TV + + FLG+  YYRRF+ N S+IA P
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  LTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ 306
            +     +     W++  + +   LK  L  +PVL   +   ++ + +DASK G+G VL +
Sbjct: 850  IQLFICD--KSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 909

Query: 307  QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 366
                     VV Y S+ L+S ++NYP  +LEL  ++  L  +R+ L+G+   +  DH SL
Sbjct: 910  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 969

Query: 367  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                 + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V
Sbjct: 970  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAV 1010

[Close]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 3.7e-78
Identity = 158/405 (39.01%), Postives = 240/405 (59.26%), Query Frame = 0


Query: 7    KELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL 186
               M   FR+    FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  KQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP 246
            ++  FLG+ +    ++    K  A+  +  P TV + + FLG+  YYRRF+ N S+IA P
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  LTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ 306
            +     +     W++  + + + LK  L  +PVL   +   ++ + +DASK G+G VL +
Sbjct: 876  IQLFICD--KSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 935

Query: 307  QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 366
                     VV Y S+ L+S ++NYP  +LEL  ++  L  +R+ L+G+   +  DH SL
Sbjct: 936  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 995

Query: 367  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                 + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +
Sbjct: 996  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAI 1036

[Close]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 7.7e-236
Identity = 408/414 (98.55%), Postives = 409/414 (98.79%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

[Close]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 2.9e-235
Identity = 407/414 (98.31%), Postives = 408/414 (98.55%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTR G PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 940 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

[Close]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL
Match: Q84KB0 (Pol protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 3.8e-235
Identity = 406/414 (98.07%), Postives = 409/414 (98.79%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY+FIVMSFGLT
Sbjct: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 181 KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 241 SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 414

[Close]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL
Match: A0A5A7UY04 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 3.2e-234
Identity = 405/414 (97.83%), Postives = 408/414 (98.55%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 811  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 870

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 871  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 930

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLR+NKLYAKFS
Sbjct: 931  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRNNKLYAKFS 990

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 991  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1050

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1051 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1110

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHE+NYPTHDLELAAVVF LKIWRHYLYGE IQIF DHKSL
Sbjct: 1111 GCVLMQQGKVVAYASRQLKSHEKNYPTHDLELAAVVFALKIWRHYLYGENIQIFTDHKSL 1170

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1171 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1224

[Close]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 4.2e-234
Identity = 405/414 (97.83%), Postives = 406/414 (98.07%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTR G PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF LKIWRHYLYGEKIQIF DHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 415
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

[Close]

BLAST of Cmc11g0304221 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 3.1e-27
Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKTGVSVDPAKIEAVTGWTRPST 221
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRNGVPFVWSKACEDSFQTLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +      W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSGSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc11g0304221 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01613.1	1.6e-235	98.55	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	6.0e-235	98.31	pol protein [Cucumis melo var. makuwa]	[more]
AAO45752.1	7.9e-235	98.07	pol protein [Cucumis melo subsp. melo]	[more]
KAA0058399.1	6.7e-234	97.83	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	8.7e-234	97.83	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	3.4e-87	40.20	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	8.3e-86	39.05	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	1.1e-82	37.17	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	3.7e-78	39.26	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.7e-78	39.01	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0304221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	7.7e-236	98.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	2.9e-235	98.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
Q84KB0	3.8e-235	98.07	Pol protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7UY04	3.2e-234	97.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5A7T190	4.2e-234	97.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]

BLAST of Cmc11g0304221 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.1e-27	45.04	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 3.5E-88 score: 296.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..381
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..381
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 1.22199E-57 score: 182.692
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.00459E-98 score: 290.266
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 2.0E-33 score: 114.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 3.5E-88 score: 296.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 1.3E-30 score: 107.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.2E-29 score: 103.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.581485
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304221.1	Cmc11g0304221.1	mRNA