Cmc11g0304211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 25781843 .. 25783139 (-)
RNA-Seq Expression	Cmc11g0304211
Synteny	Cmc11g0304211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATCGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGCTGAGTTCTCGTTATCCTCTGACGGTGGACTATTGTTTGAAAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGATAGAATTATTAGCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGACTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCTGGTTTGCTGGGGTGAGGTAGGTGAACAGAGATTGATGGGTCCGAAGTTAGTTCAGTCTACTAACAAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTATTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTCGAAAGGAAGGGGAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGAAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGA

mRNA sequence

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATCGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGCTGAGTTCTCGTTATCCTCTGACGGTGGACTATTGTTTGAAAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGATAGAATTATTAGCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGACTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCTGGTTTGCTGGGGTGAGGTAGGTGAACAGAGATTGATGGGTCCGAAGTTAGTTCAGTCTACTAACAAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTATTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTCGAAAGGAAGGGGAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGAAAATTGATGAAAACTTGA

Coding sequence (CDS)

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATCGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGCTGAGTTCTCGTTATCCTCTGACGGTGGACTATTGTTTGAAAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGATAGAATTATTAGCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGACAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGACTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTTTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAGATGTTGTAGATCCCTGGTTTGCTGGGGTGAGGTAGGTGAACAGAGATTGATGGGTCCGAAGTTAGTTCAGTCTACTAACAAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGATAGGGGATAAGGTATTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTCGAAAGGAAGGGGAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGAAAATTGATGAAAACTTGA

Protein sequence

MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGEVGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKLMKT

Homology

[Close]

BLAST of Cmc11g0304211 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 822.8 bits (2124), Expect = 1.4e-234
Identity = 404/412 (98.06%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSD
Sbjct: 962  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 1021

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1022 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1081

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1082 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1141

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1142 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1201

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCWGE
Sbjct: 1202 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1261

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK
Sbjct: 1262 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 1321

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1322 GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc11g0304211 vs. NCBI nr
Match: KAA0025425.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 817.0 bits (2109), Expect = 7.4e-233
Identity = 401/412 (97.33%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD
Sbjct: 1   MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60

Query: 61  SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVK ELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 61  SAVKTELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180

Query: 181 KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
           LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRS VCWGE
Sbjct: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 300

Query: 301 VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
           VGEQRLMG +LVQSTN+AIQKIRSRMHTAQSRQKSYADVRR DLEFE+GDKVFLKVAPM+
Sbjct: 301 VGEQRLMGLELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMR 360

Query: 361 GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
           GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 361 GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 412

[Close]

BLAST of Cmc11g0304211 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 814.7 bits (2103), Expect = 3.7e-232
Identity = 399/411 (97.08%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 2   QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDS 61
           QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSDS
Sbjct: 67  QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 126

Query: 62  AVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 121
           AVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK
Sbjct: 127 AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 186

Query: 122 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 181
           PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK
Sbjct: 187 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 246

Query: 182 WAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 241
           WAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Sbjct: 247 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 306

Query: 242 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGEV 301
           NQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCW EV
Sbjct: 307 NQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEV 366

Query: 302 GEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKG 361
           GEQRLMGP+LVQSTN+A+QKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMKG
Sbjct: 367 GEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKG 426

Query: 362 VLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
           VLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 427 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc11g0304211 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 813.9 bits (2101), Expect = 6.3e-232
Identity = 397/412 (96.36%), Postives = 406/412 (98.54%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ AEFSLSSDGGLLFERRLCVPSD
Sbjct: 1012 MQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSD 1071

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVKIELL+EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1072 SAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1131

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1132 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1191

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1192 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1251

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCWGE
Sbjct: 1252 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1311

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+
Sbjct: 1312 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMR 1371

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GV+RFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1372 GVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1423

[Close]

BLAST of Cmc11g0304211 vs. NCBI nr
Match: KAA0062245.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 813.1 bits (2099), Expect = 1.1e-231
Identity = 397/412 (96.36%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD
Sbjct: 1077 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 1136

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP Q
Sbjct: 1137 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQ 1196

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF+VIWVVVDRLTKSAHFV GKSTYTAS
Sbjct: 1197 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTAS 1256

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1257 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1316

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CC+S VCWGE
Sbjct: 1317 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCKSPVCWGE 1376

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+
Sbjct: 1377 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMR 1436

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GVLRFER+GKLSPRFVGPFEILERIGP+AYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1437 GVLRFERRGKLSPRFVGPFEILERIGPIAYRLALPPSLSTVHDVFHVSMLRK 1488

[Close]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-54
Identity = 128/414 (30.92%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 5    QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P   ++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEAL--YGRCCRSLVCWGE 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE +  Y      L    E
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----E 1152

Query: 305  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPM 364
            +        +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    
Sbjct: 1153 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1212

Query: 365  KGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK 413
             G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1213 TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-54
Identity = 128/414 (30.92%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 5    QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P   ++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEAL--YGRCCRSLVCWGE 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE +  Y      L    E
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----E 1152

Query: 305  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPM 364
            +        +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    
Sbjct: 1153 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1212

Query: 365  KGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK 413
             G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1213 TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-54
Identity = 128/414 (30.92%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 5    QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P   ++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEAL--YGRCCRSLVCWGE 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE +  Y      L    E
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----E 1152

Query: 305  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPM 364
            +        +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    
Sbjct: 1153 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1212

Query: 365  KGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK 413
             G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1213 TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-54
Identity = 128/414 (30.92%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 5    QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P   ++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEAL--YGRCCRSLVCWGE 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE +  Y      L    E
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----E 1152

Query: 305  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPM 364
            +        +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    
Sbjct: 1153 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1212

Query: 365  KGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK 413
             G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1213 TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-54
Identity = 128/414 (30.92%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 5    QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P   ++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEAL--YGRCCRSLVCWGE 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE +  Y      L    E
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----E 1152

Query: 305  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEIGDKVFLKVAPM 364
            +        +  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    
Sbjct: 1153 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1212

Query: 365  KGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK 413
             G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1213 TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 6.6e-235
Identity = 404/412 (98.06%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSD
Sbjct: 962  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 1021

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1022 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1081

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1082 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1141

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1142 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1201

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCWGE
Sbjct: 1202 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1261

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK
Sbjct: 1262 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 1321

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1322 GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL
Match: A0A5A7SLT0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE=4 SV=1)

HSP 1 Score: 817.0 bits (2109), Expect = 3.6e-233
Identity = 401/412 (97.33%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD
Sbjct: 1   MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60

Query: 61  SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVK ELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 61  SAVKTELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180

Query: 181 KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
           LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRS VCWGE
Sbjct: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 300

Query: 301 VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
           VGEQRLMG +LVQSTN+AIQKIRSRMHTAQSRQKSYADVRR DLEFE+GDKVFLKVAPM+
Sbjct: 301 VGEQRLMGLELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMR 360

Query: 361 GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
           GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 361 GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 412

[Close]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 1.8e-232
Identity = 399/411 (97.08%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 2   QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDS 61
           QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSDS
Sbjct: 67  QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 126

Query: 62  AVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 121
           AVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK
Sbjct: 127 AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 186

Query: 122 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 181
           PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK
Sbjct: 187 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 246

Query: 182 WAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 241
           WAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Sbjct: 247 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 306

Query: 242 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGEV 301
           NQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCW EV
Sbjct: 307 NQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEV 366

Query: 302 GEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKG 361
           GEQRLMGP+LVQSTN+A+QKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMKG
Sbjct: 367 GEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKG 426

Query: 362 VLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
           VLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 427 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.0e-232
Identity = 397/412 (96.36%), Postives = 406/412 (98.54%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ AEFSLSSDGGLLFERRLCVPSD
Sbjct: 1012 MQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTAEFSLSSDGGLLFERRLCVPSD 1071

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVKIELL+EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1072 SAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1131

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1132 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1191

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1192 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1251

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS VCWGE
Sbjct: 1252 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1311

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+
Sbjct: 1312 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMR 1371

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GV+RFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1372 GVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1423

[Close]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL
Match: A0A5A7V8L8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE=4 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 5.2e-232
Identity = 397/412 (96.36%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD
Sbjct: 1077 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSD 1136

Query: 61   SAVKIELLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVK ELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAP Q
Sbjct: 1137 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQ 1196

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF+VIWVVVDRLTKSAHFV GKSTYTAS
Sbjct: 1197 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTAS 1256

Query: 181  KWAQLYMSEIVRLHGVPVSTVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVS VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1257 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1316

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSLVCWGE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CC+S VCWGE
Sbjct: 1317 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCKSPVCWGE 1376

Query: 301  VGEQRLMGPKLVQSTNKAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMK 360
            VGEQRLMGP+LVQSTN+AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+
Sbjct: 1377 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMR 1436

Query: 361  GVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 413
            GVLRFER+GKLSPRFVGPFEILERIGP+AYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1437 GVLRFERRGKLSPRFVGPFEILERIGPIAYRLALPPSLSTVHDVFHVSMLRK 1488

The following BLAST results are available for this feature:

BLAST of Cmc11g0304211 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051368.1	1.4e-234	98.06	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025425.1	7.4e-233	97.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043669.1	3.7e-232	97.08	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066456.1	6.3e-232	96.36	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062245.1	1.1e-231	96.36	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.9e-54	30.92	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.9e-54	30.92	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.9e-54	30.92	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.9e-54	30.92	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.9e-54	30.92	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7V9	6.6e-235	98.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7SLT0	3.6e-233	97.33	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE...	[more]
A0A5A7TR61	1.8e-232	97.08	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]
A0A5A7VJE2	3.0e-232	96.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7V8L8	5.2e-232	96.36	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE...	[more]

BLAST of Cmc11g0304211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 26..116 e-value: 5.0E-18 score: 67.1
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 53..332
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 62..117 e-value: 6.0E-17 score: 61.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 125..333 e-value: 3.3E-45 score: 155.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 128..291 score: 18.437578
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 129..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304211.1	Cmc11g0304211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding