Cmc11g0304171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 25728772 .. 25729245 (+)
RNA-Seq Expression	Cmc11g0304171
Synteny	Cmc11g0304171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGCTGAGGAAGGGTTGCAAAACGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAGCTGAAGCCAGAAGATGTTCATGTGGTGAAAGAGTTTCTTGATGTATTCCCAGCTGATCTGTCAGGTTTTCCACCTGATAAAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCAAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGTGCGCCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTTTTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCTTCGCGACTTATTTGATCAATTAA

mRNA sequence

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGCTGAGGAAGGGTTGCAAAACGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAGCTGAAGCCAGAAGATGTTCATGTGGTGAAAGAGTTTCTTGATGTATTCCCAGCTGATCTGTCAGGTTTTCCACCTGATAAAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCAAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGTGCGCCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTTTTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCTTCGCGACTTATTTGATCAATTAA

Coding sequence (CDS)

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGCTGAGGAAGGGTTGCAAAACGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAGCTGAAGCCAGAAGATGTTCATGTGGTGAAAGAGTTTCTTGATGTATTCCCAGCTGATCTGTCAGGTTTTCCACCTGATAAAGAGATTGAGTTCACCATTGAATTATTACCAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCAAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGTGCGCCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTTTTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCTTCGCGACTTATTTGATCAATTAA

Protein sequence

MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGFPPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLPRFATYLIN

Homology

[Close]

BLAST of Cmc11g0304171 vs. NCBI nr
Match: KAA0062270.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 141/150 (94.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC TFLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 478 MRKAVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 537

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 538 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 597

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 598 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 627

[Close]

BLAST of Cmc11g0304171 vs. NCBI nr
Match: KAA0026295.1 (putative Gag-pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 141/150 (94.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC TFLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 691

[Close]

BLAST of Cmc11g0304171 vs. NCBI nr
Match: TYK27290.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 509 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 568

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 569 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 628

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 629 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 658

[Close]

BLAST of Cmc11g0304171 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 241 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 300

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 301 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 360

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 361 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 390

[Close]

BLAST of Cmc11g0304171 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 580 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 640 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 700 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 729

[Close]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 45  VVKEFLDVFPADLSGFPPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDK 104
           +++  L   PAD++  P    ++  IE+ PG       PY +     +E+   +Q+L+D 
Sbjct: 567 IIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 626

Query: 105 GYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLPRFATYL 156
            +I PS SP  +PV+ V KKDGT RLC DYR LNK TI + +PLPR    L
Sbjct: 627 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLL 673

[Close]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 45  VVKEFLDVFPADLSGFPPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDK 104
           +++  L   PAD++  P    ++  IE+ PG       PY +     +E+   +Q+L+D 
Sbjct: 593 IIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 652

Query: 105 GYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLPRFATYL 156
            +I PS SP  +PV+ V KKDGT RLC DYR LNK TI + +PLPR    L
Sbjct: 653 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLL 699

[Close]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 39  KPEDVHVVKEFLDV-FPADLSGFP-PDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKM 98
           +PE   + KEF D+    +    P P K +EF +EL      +    Y + P K++ +  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMND 430

Query: 99  QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLP 150
           ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 483

[Close]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 39  KPEDVHVVKEFLDV-FPADLSGFP-PDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKM 98
           +PE   + KEF D+    +    P P K +EF +EL      +    Y + P K++ +  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMND 430

Query: 99  QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLP 150
           ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 483

[Close]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 39  KPEDVHVVKEFLDV-FPADLSGFP-PDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKM 98
           +PE   + KEF D+    +    P P K +EF +EL      +    Y + P K++ +  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMND 430

Query: 99  QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCFDYRQLNKVTIRNKYPLP 150
           ++ + +  G IR S +    PV+FV KK+GTLR+  DY+ LNK    N YPLP
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 483

[Close]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL
Match: A0A5A7SPH3 (Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G003020 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 141/150 (94.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC TFLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 691

[Close]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL
Match: A0A5A7V4W9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00400 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 141/150 (94.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC TFLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 478 MRKAVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 537

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 538 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 597

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 598 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 627

[Close]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 691

[Close]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 580 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 640 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 700 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 729

[Close]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.0e-72
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCKTFLAHIVVVQREKLKPEDVHVVKEFLDVFPADLSGF 60
           MRK VSRSLISVLKAEKLLRKGC  FLAHIVVVQREKLKPEDV VVKEFLDVFP DLSG 
Sbjct: 580 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61  PPDKEIEFTIELLPGTTPISQAPYRMAPSKLKELKMQLQELVDKGYIRPSVSPWGAPVLF 120
           PPD+EIEFTIELLPGT PISQAPYRMAPS+LKELKMQLQELVDKGYIRPSVSPWGAPVLF
Sbjct: 640 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121 VKKKDGTLRLCFDYRQLNKVTIRNKYPLPR 151
           VKKKDGTLRLC DYRQLNKVTIRNKYPLPR
Sbjct: 700 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPR 729

The following BLAST results are available for this feature:

BLAST of Cmc11g0304171 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062270.1	3.2e-72	94.00	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0026295.1	3.2e-72	94.00	putative Gag-pol protein [Cucumis melo var. makuwa]	[more]
TYK27290.1	1.2e-71	93.33	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050527.1	1.2e-71	93.33	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	1.2e-71	93.33	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.6e-16	39.64	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.6e-16	39.64	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	4.3e-11	35.40	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.3e-11	35.40	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.3e-11	35.40	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPH3	1.6e-72	94.00	Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7V4W9	1.6e-72	94.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5A7U2V7	6.0e-72	93.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	6.0e-72	93.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	6.0e-72	93.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc11g0304171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 60..154 e-value: 5.6E-34 score: 118.8
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 8..139
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..139
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 45..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0304171.1	Cmc11g0304171.1	mRNA