Homology
BLAST of Cmc11g0303961 vs. NCBI nr
Match:
KAA0051442.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22211.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 359.0 bits (920), Expect = 3.0e-95
Identity = 179/194 (92.27%), Postives = 181/194 (93.30%), Query Frame = 0
Query: 5 GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM 64
GRDL KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM
Sbjct: 768 GRDLTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM 827
Query: 65 ANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSL 124
ANSKVV TPLAQHIKISAR SPKDPTDRQ MSYVPYSNA GSLMYLMVCTRPDLAHSSSL
Sbjct: 828 ANSKVVSTPLAQHIKISARGSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLAHSSSL 887
Query: 125 VSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRS 184
VS Y+GNP KIHW ATKWVF YLVGTENRGLLYKPPKDSKL+VRGFVD DFAGDPDKRRS
Sbjct: 888 VSRYMGNPDKIHWEATKWVFTYLVGTENRGLLYKPPKDSKLRVRGFVDVDFAGDPDKRRS 947
Query: 185 LTGFAFTLGENLIS 199
LTGFAFTL ENLIS
Sbjct: 948 LTGFAFTLEENLIS 961
BLAST of Cmc11g0303961 vs. NCBI nr
Match:
TYK27724.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 342.8 bits (878), Expect = 2.3e-90
Identity = 175/198 (88.38%), Postives = 181/198 (91.41%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
MLLAGRD KLKEIKAQLS EFDMKDLGA KKIL +EILRDRN NELSL QKTYTNKVLC
Sbjct: 75 MLLAGRDPTKLKEIKAQLSAEFDMKDLGAAKKIL-VEILRDRNTNELSLIQKTYTNKVLC 134
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
RFNMANSKV TPLAQHIKISARDSPKDPTDRQ MSYV YSNA GSLMYLMVCTRPDLAH
Sbjct: 135 RFNMANSKVT-TPLAQHIKISARDSPKDPTDRQAMSYVSYSNATGSLMYLMVCTRPDLAH 194
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
SSS+V+ Y+GNPGKIHW ATKWVFRYLVGTENRGLLYKPPKD KL+VRGFVDA+FAGDPD
Sbjct: 195 SSSIVNRYMGNPGKIHWEATKWVFRYLVGTENRGLLYKPPKDFKLRVRGFVDANFAGDPD 254
Query: 181 KRRSLTGFAFTLGENLIS 199
K R LTGFAFTLGENLIS
Sbjct: 255 KIRLLTGFAFTLGENLIS 270
BLAST of Cmc11g0303961 vs. NCBI nr
Match:
KAA0039651.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ95535.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 321.6 bits (823), Expect = 5.4e-84
Identity = 160/188 (85.11%), Postives = 169/188 (89.89%), Query Frame = 0
Query: 13 EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFT 72
E+K ++ + DLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFN+ANSKVV T
Sbjct: 489 EVKGKMEL-----DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNLANSKVVST 548
Query: 73 PLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNP 132
PLAQHIKISARDSPKDPTDRQ MSYVPYSNA GSLMYLMVCTRPDLAHSSSLVS Y+GN
Sbjct: 549 PLAQHIKISARDSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLAHSSSLVSRYMGNS 608
Query: 133 GKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTL 192
GKIHW ATKWVFRYLVGTENRGLLYK P DSKL+VRGF+D DFAGDPDKRRSLTG AFTL
Sbjct: 609 GKIHWEATKWVFRYLVGTENRGLLYKSPNDSKLRVRGFMDTDFAGDPDKRRSLTGVAFTL 668
Query: 193 GENLISWK 201
GENLI+ K
Sbjct: 669 GENLITVK 671
BLAST of Cmc11g0303961 vs. NCBI nr
Match:
KAA0054988.1 (hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 289.3 bits (739), Expect = 3.0e-74
Identity = 158/218 (72.48%), Postives = 162/218 (74.31%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
MLLAGRD KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNK
Sbjct: 732 MLLAGRDPTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNK--- 791
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
A GSLMYLMVCTR DLAH
Sbjct: 792 ------------------------------------------ATGSLMYLMVCTRLDLAH 851
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
SSSLVS Y+GNP KIHW ATKWVFRYLVGTENRGLLYKPPKDSKL+VRGFVDADFAGDP
Sbjct: 852 SSSLVSRYMGNPSKIHWEATKWVFRYLVGTENRGLLYKPPKDSKLRVRGFVDADFAGDPY 904
Query: 181 KRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFKV 219
KRRSLTGFAFTLGENLISWKSNLQSVVALST+EA+F V
Sbjct: 912 KRRSLTGFAFTLGENLISWKSNLQSVVALSTTEAKFIV 904
BLAST of Cmc11g0303961 vs. NCBI nr
Match:
KAA0033501.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK26828.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 285.8 bits (730), Expect = 3.3e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 19 SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI 78
+ +KDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI
Sbjct: 541 TTRISLKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI 600
Query: 79 KISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWG 138
KISARDSPKDPTDRQ MSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYI NPGKIHW
Sbjct: 601 KISARDSPKDPTDRQAMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIENPGKIHWE 660
Query: 139 ATKWVFRYLVGTENRGLLYKPPKDSKL 166
ATKWVFRYLVGTENRGLLYKPPKDSKL
Sbjct: 661 ATKWVFRYLVGTENRGLLYKPPKDSKL 687
BLAST of Cmc11g0303961 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 1.0e-53
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
ML+ G+D + ++K LS FDMKDLG ++ILG++I+R+R + +L L+Q+ Y +VL
Sbjct: 1012 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1071
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
RFNM N+K V TPLA H+K+S + P ++ M+ VPYS+A+GSLMY MVCTRPD+AH
Sbjct: 1072 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAH 1131
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
+ +VS ++ NPGK HW A KW+ RYL GT L + S ++G+ DAD AGD D
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF---GGSDPILKGYTDADMAGDID 1191
Query: 181 KRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEF 217
R+S TG+ FT ISW+S LQ VALST+EAE+
Sbjct: 1192 NRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEY 1224
BLAST of Cmc11g0303961 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
+++A D+ ++ K L +F M DL K +GI I + +++ L+Q Y K+L
Sbjct: 1091 VVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILS 1150
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
+FNM N V TPL I +S +D P + IG LMY+M+CTRPDL
Sbjct: 1151 KFNMENCNAVSTPLPSKINYELLNSDED-------CNTPCRSLIGCLMYIMLCTRPDLTT 1210
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
+ +++S Y W K V RYL GT + L++K + ++ G+VD+D+AG
Sbjct: 1211 AVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEI 1270
Query: 181 KRRSLTGFAFTLGE-NLISWKSNLQSVVALSTSEAEFKVFF 221
R+S TG+ F + + NLI W + Q+ VA S++EAE+ F
Sbjct: 1271 DRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALF 1302
BLAST of Cmc11g0303961 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 2.8e-27
Identity = 82/219 (37.44%), Postives = 114/219 (52.05%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
+L+ G D + LK LS F +K+ LGIE R L L+Q+ YT +L
Sbjct: 1137 ILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDLLA 1196
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPK--DPTDRQTMSYVPYSNAIGSLMYLMVCTRPDL 120
R NM +K V TP+A K++ K DPT+ Y +GSL YL TRPDL
Sbjct: 1197 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE--------YRGIVGSLQYL-AFTRPDL 1256
Query: 121 AHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGD 180
+++ + +S Y+ P HW A K V RYL GT + G+ K K + L + + DAD+AGD
Sbjct: 1257 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK--KGNTLSLHAYSDADWAGD 1316
Query: 181 PDKRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFK 218
D S G+ LG + ISW S Q V S++EAE++
Sbjct: 1317 TDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1342
BLAST of Cmc11g0303961 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22
Identity = 76/218 (34.86%), Postives = 114/218 (52.29%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
+LL G L + QLS F MKDLG LGI+I + + L L+Q Y ++L
Sbjct: 10 ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILN 69
Query: 61 RFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLA 120
M + K + TPL + S + DP+D + + +G+L YL + TRPD++
Sbjct: 70 NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD--------FRSIVGALQYLTL-TRPDIS 129
Query: 121 HSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDP 180
++ ++V + P + K V RY+ GT GL K+SKL V+ F D+D+AG
Sbjct: 130 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIH--KNSKLNVQAFCDSDWAGCT 189
Query: 181 DKRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFK 218
RRS TGF LG N+ISW + Q V+ S++E E++
Sbjct: 190 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 214
BLAST of Cmc11g0303961 vs. ExPASy Swiss-Prot
Match:
P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 95 MSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRG 154
M VPY +A+G++MYLMV TRPDLA + ++S + +P HW A K V RYL T+ G
Sbjct: 1 MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60
Query: 155 LLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWKSNLQSVVALSTSEA 214
L + +KL G+ DAD+AGD + RRS +G+ F L +SW+S Q VALS++E
Sbjct: 61 LEFTRAGTAKLV--GYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTED 120
Query: 215 EF 217
E+
Sbjct: 121 EY 120
BLAST of Cmc11g0303961 vs. ExPASy TrEMBL
Match:
A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 179/194 (92.27%), Postives = 181/194 (93.30%), Query Frame = 0
Query: 5 GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM 64
GRDL KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM
Sbjct: 768 GRDLTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNM 827
Query: 65 ANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSL 124
ANSKVV TPLAQHIKISAR SPKDPTDRQ MSYVPYSNA GSLMYLMVCTRPDLAHSSSL
Sbjct: 828 ANSKVVSTPLAQHIKISARGSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLAHSSSL 887
Query: 125 VSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRS 184
VS Y+GNP KIHW ATKWVF YLVGTENRGLLYKPPKDSKL+VRGFVD DFAGDPDKRRS
Sbjct: 888 VSRYMGNPDKIHWEATKWVFTYLVGTENRGLLYKPPKDSKLRVRGFVDVDFAGDPDKRRS 947
Query: 185 LTGFAFTLGENLIS 199
LTGFAFTL ENLIS
Sbjct: 948 LTGFAFTLEENLIS 961
BLAST of Cmc11g0303961 vs. ExPASy TrEMBL
Match:
A0A5D3DW48 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00700 PE=4 SV=1)
HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90
Identity = 175/198 (88.38%), Postives = 181/198 (91.41%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
MLLAGRD KLKEIKAQLS EFDMKDLGA KKIL +EILRDRN NELSL QKTYTNKVLC
Sbjct: 75 MLLAGRDPTKLKEIKAQLSAEFDMKDLGAAKKIL-VEILRDRNTNELSLIQKTYTNKVLC 134
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
RFNMANSKV TPLAQHIKISARDSPKDPTDRQ MSYV YSNA GSLMYLMVCTRPDLAH
Sbjct: 135 RFNMANSKVT-TPLAQHIKISARDSPKDPTDRQAMSYVSYSNATGSLMYLMVCTRPDLAH 194
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
SSS+V+ Y+GNPGKIHW ATKWVFRYLVGTENRGLLYKPPKD KL+VRGFVDA+FAGDPD
Sbjct: 195 SSSIVNRYMGNPGKIHWEATKWVFRYLVGTENRGLLYKPPKDFKLRVRGFVDANFAGDPD 254
Query: 181 KRRSLTGFAFTLGENLIS 199
K R LTGFAFTLGENLIS
Sbjct: 255 KIRLLTGFAFTLGENLIS 270
BLAST of Cmc11g0303961 vs. ExPASy TrEMBL
Match:
A0A5D3BAM8 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00260 PE=4 SV=1)
HSP 1 Score: 321.6 bits (823), Expect = 2.6e-84
Identity = 160/188 (85.11%), Postives = 169/188 (89.89%), Query Frame = 0
Query: 13 EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFT 72
E+K ++ + DLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFN+ANSKVV T
Sbjct: 489 EVKGKMEL-----DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNLANSKVVST 548
Query: 73 PLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNP 132
PLAQHIKISARDSPKDPTDRQ MSYVPYSNA GSLMYLMVCTRPDLAHSSSLVS Y+GN
Sbjct: 549 PLAQHIKISARDSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLAHSSSLVSRYMGNS 608
Query: 133 GKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTL 192
GKIHW ATKWVFRYLVGTENRGLLYK P DSKL+VRGF+D DFAGDPDKRRSLTG AFTL
Sbjct: 609 GKIHWEATKWVFRYLVGTENRGLLYKSPNDSKLRVRGFMDTDFAGDPDKRRSLTGVAFTL 668
Query: 193 GENLISWK 201
GENLI+ K
Sbjct: 669 GENLITVK 671
BLAST of Cmc11g0303961 vs. ExPASy TrEMBL
Match:
A0A5A7UJ23 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001360 PE=4 SV=1)
HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 158/218 (72.48%), Postives = 162/218 (74.31%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
MLLAGRD KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNK
Sbjct: 732 MLLAGRDPTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNK--- 791
Query: 61 RFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAH 120
A GSLMYLMVCTR DLAH
Sbjct: 792 ------------------------------------------ATGSLMYLMVCTRLDLAH 851
Query: 121 SSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPD 180
SSSLVS Y+GNP KIHW ATKWVFRYLVGTENRGLLYKPPKDSKL+VRGFVDADFAGDP
Sbjct: 852 SSSLVSRYMGNPSKIHWEATKWVFRYLVGTENRGLLYKPPKDSKLRVRGFVDADFAGDPY 904
Query: 181 KRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFKV 219
KRRSLTGFAFTLGENLISWKSNLQSVVALST+EA+F V
Sbjct: 912 KRRSLTGFAFTLGENLISWKSNLQSVVALSTTEAKFIV 904
BLAST of Cmc11g0303961 vs. ExPASy TrEMBL
Match:
A0A5A7SVP7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00170 PE=4 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 1.6e-73
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 19 SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI 78
+ +KDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI
Sbjct: 541 TTRISLKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHI 600
Query: 79 KISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWG 138
KISARDSPKDPTDRQ MSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYI NPGKIHW
Sbjct: 601 KISARDSPKDPTDRQAMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIENPGKIHWE 660
Query: 139 ATKWVFRYLVGTENRGLLYKPPKDSKL 166
ATKWVFRYLVGTENRGLLYKPPKDSKL
Sbjct: 661 ATKWVFRYLVGTENRGLLYKPPKDSKL 687
BLAST of Cmc11g0303961 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 76/218 (34.86%), Postives = 114/218 (52.29%), Query Frame = 0
Query: 1 MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLC 60
+LL G L + QLS F MKDLG LGI+I + + L L+Q Y ++L
Sbjct: 10 ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILN 69
Query: 61 RFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLA 120
M + K + TPL + S + DP+D + + +G+L YL + TRPD++
Sbjct: 70 NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD--------FRSIVGALQYLTL-TRPDIS 129
Query: 121 HSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDP 180
++ ++V + P + K V RY+ GT GL K+SKL V+ F D+D+AG
Sbjct: 130 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIH--KNSKLNVQAFCDSDWAGCT 189
Query: 181 DKRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFK 218
RRS TGF LG N+ISW + Q V+ S++E E++
Sbjct: 190 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 214
BLAST of Cmc11g0303961 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 71/209 (33.97%), Postives = 105/209 (50.24%), Query Frame = 0
Query: 13 EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFT 72
E+K+QL F ++DLG K LG+EI R +++ Q+ Y +L + K
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSV 358
Query: 73 PLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNP 132
P+ + SA S D D + Y IG LMYL + TR D++ + + +S + P
Sbjct: 359 PMDPSVTFSAH-SGGDFVDAKA-----YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAP 418
Query: 133 GKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTL 192
H A + Y+ GT +GL Y + +LQV F DA F D RRS G+ L
Sbjct: 419 RLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFL 478
Query: 193 GENLISWKSNLQSVVALSTSEAEFKVFFY 222
G +LISWKS Q VV+ S++EAE++ +
Sbjct: 479 GTSLISWKSKKQQVVSKSSAEAEYRALSF 496
BLAST of Cmc11g0303961 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 56.2 bits (134), Expect = 3.9e-08
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 0
Query: 108 MYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQV 167
MYL + TRPDL + + +S + A V Y+ GT +GL Y D LQ+
Sbjct: 1 MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSD--LQL 60
Query: 168 RGFVDADFAGDPDKRRSLTGF 189
+ F D+D+A PD RRS+TGF
Sbjct: 61 KAFADSDWASCPDTRRSVTGF 78
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0051442.1 | 3.0e-95 | 92.27 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK27724.1 | 2.3e-90 | 88.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0039651.1 | 5.4e-84 | 85.11 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]... | [more] |
KAA0054988.1 | 3.0e-74 | 72.48 | hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa] | [more] |
KAA0033501.1 | 3.3e-73 | 93.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.0e-53 | 49.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 1.1e-28 | 34.39 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 2.8e-27 | 37.44 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P92519 | 1.6e-22 | 34.86 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
P0CV72 | 1.6e-22 | 45.08 | Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U6R2 | 1.5e-95 | 92.27 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3DW48 | 1.1e-90 | 88.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3BAM8 | 2.6e-84 | 85.11 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
A0A5A7UJ23 | 1.4e-74 | 72.48 | Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7SVP7 | 1.6e-73 | 93.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00810.1 | 1.1e-23 | 34.86 | DNA/RNA polymerases superfamily protein | [more] |
AT4G23160.1 | 2.1e-22 | 33.97 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00240.1 | 3.9e-08 | 39.51 | Gag-Pol-related retrotransposon family protein | [more] |