Cmc11g0303951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 25506521 .. 25508346 (+)
RNA-Seq Expression	Cmc11g0303951
Synteny	Cmc11g0303951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCTAAGAAAAATTGGTTTGTTGACTATAAATCACAAGAGAGAGACTCAGTTTACATGGGAAATAATCAAGACTATGAGATTATTGGTGTAGGCCCAGTGTTGTTGAAGCTATCTAACAACAAGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGGCCTAAGGTGCTTCATTTATATTGAAAGAGGCTTCATGAAAGTGGAAAGACAAGGCAGAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTCTAATTTCAGAAACTGAGAAAGGAAATGAATTAGAACTATGGCATCAAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGTCGATTCAAGCTAGAGGAGTAAAAAGACTTGGCTTCTGTGAACACTGCATCTTTGACAAGTCTAAGAGGCTGAAATTCTTTAAAGGAAAACATCACTCAAAAGCCACCTTAGACTATGTACATGGTGATCTTTGGGAACCAGCTAGAACTCATTCTTGGGGAGGATCAAGGTACTTTTTATCTCTTATAGATGATTTTTCAAGAAAAGTATGGACTTATCCTCTAAAATCTAAAGATCAAGTTTTTGAATGTTTTAAAAATTGGAAAGTTAAAGTAGAAACTCAAACTGAAAGGAAGATTAAATACTTAAGAATTGATATGGTCTAGAATTTATTAGTAATGATTTTAACTTCCTATGTAATGAGTTTGGTATATCAAGGCACAGAACAGTTGCTTACACCCCTCAACAGAATGGAGTTGCTGAGAGGATGAATAGAACATTGAGGGAAAGAGTGAGATGTATGATTTCAAAGGCAAAAATCTTAGAAAATTTTTTGGTTGAAGCTTTAGCTACTGCCACCTATACAGTGAATAGAAGCCCATGTGTTTTTATAGACATGAAGACTCATGAAGAAAGATGGACTGAAGCTACCCCTAAGCTCTCTAATCTAAAACCTTTTGGGTGTACAACATATGTCTACATCAAACAAAGCAAGATTGAACCTAGAGCTCTTAAATGTATGTTTATTGGCTACCCTGATGGTGTCAAAGGCTACAAGCTCTGGGATTTCTCTAAAGAAAGAAGCCTAATAAGCAGAGATGTTGTTTTCAAGGAGAATGAAATCTATATGGAGTCTATCAAAGTAATACCGTCTACTAAACAGAATTTGAATGAACCTTCTACCAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTTAAACCCTAGCAGCAGTGATCAACTTCCAACAGAAGCTCTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGCTTAACAAGAGATAGAGGAAGAAGAACCATTAGACCTCCTTCTAGATTTGCAAGAGCAGATCGCATAGCTAACTCCTCTACAGAGACTATAAAAGATGAGCCTTACAGTTATGAAGATGCTCTATACAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGCTGAACTTAATTCACTCTACAAGAAGGATACTTTGAAATTAGTAGAAAAGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAGAAGAAGATGATTGGTGAATTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCAAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTCCCCTGTTGAAAGCACACTTCCATAAGAATCCTACTGGCCATTGTAGCATGTGA

mRNA sequence

ATGACTTCTAAGAAAAATTGGTTTGTTGACTATAAATCACAAGAGAGAGACTCAGTTTACATGGGAAATAATCAAGACTATGAGATTATTGGTGTAGGCCCAGTGTTGTTGAAGCTATCTAACAACAAGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGGCCTAAGGTGCTTCATTTATATTGAAAGAGGCTTCATGAAAGTGGAAAGACAAGGCAGAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTCTAATTTCAGAAACTGAGAAAGGAAATGAATTAGAACTATGGCATCAAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGTCGATTCAAGCTAGAGGAGTAAAAAGACTTGGCTTCTGTGAACACTGCATCTTTGACAAGTCTAAGAGGCTGAAATTCTTTAAAGGAAAACATCACTCAAAAGCCACCTTAGACTATGTACATGGTGATCTTTGGGAACCAGCTAGAACTCATTCTTGGGGAGGATCAAGAACAGTTGCTTACACCCCTCAACAGAATGGAGTTGCTGAGAGGATGAATAGAACATTGAGGGAAAGAGTGAGATGTATGATTTCAAAGGCAAAAATCTTAGAAAATTTTTTGGTTGAAGCTTTAGCTACTGCCACCTATACAGTGAATAGAAGCCCATGTGTTTTTATAGACATGAAGACTCATGAAGAAAGATGGACTGAAGCTACCCCTAAGCTCTCTAATCTAAAACCTTTTGGGTGTACAACATATGTCTACATCAAACAAAGCAAGATTGAACCTAGAGCTCTTAAATGTATGTTTATTGGCTACCCTGATGGTGTCAAAGGCTACAAGCTCTGGGATTTCTCTAAAGAAAGAAGCCTAATAAGCAGAGATGTTGTTTTCAAGGAGAATGAAATCTATATGGAGTCTATCAAAGTAATACCGTCTACTAAACAGAATTTGAATGAACCTTCTACCAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTTAAACCCTAGCAGCAGTGATCAACTTCCAACAGAAGCTCTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGCTTAACAAGAGATAGAGGAAGAAGAACCATTAGACCTCCTTCTAGATTTGCAAGAGCAGATCGCATAGCTAACTCCTCTACAGAGACTATAAAAGATGAGCCTTACAGTTATGAAGATGCTCTATACAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGCTGAACTTAATTCACTCTACAAGAAGGATACTTTGAAATTAGTAGAAAAGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAGAAGAAGATGATTGGTGAATTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCAAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTCCCCTGTTGAAAGCACACTTCCATAAGAATCCTACTGGCCATTGTAGCATGTGA

Coding sequence (CDS)

ATGACTTCTAAGAAAAATTGGTTTGTTGACTATAAATCACAAGAGAGAGACTCAGTTTACATGGGAAATAATCAAGACTATGAGATTATTGGTGTAGGCCCAGTGTTGTTGAAGCTATCTAACAACAAGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGGCCTAAGGTGCTTCATTTATATTGAAAGAGGCTTCATGAAAGTGGAAAGACAAGGCAGAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTCTAATTTCAGAAACTGAGAAAGGAAATGAATTAGAACTATGGCATCAAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGTCGATTCAAGCTAGAGGAGTAAAAAGACTTGGCTTCTGTGAACACTGCATCTTTGACAAGTCTAAGAGGCTGAAATTCTTTAAAGGAAAACATCACTCAAAAGCCACCTTAGACTATGTACATGGTGATCTTTGGGAACCAGCTAGAACTCATTCTTGGGGAGGATCAAGAACAGTTGCTTACACCCCTCAACAGAATGGAGTTGCTGAGAGGATGAATAGAACATTGAGGGAAAGAGTGAGATGTATGATTTCAAAGGCAAAAATCTTAGAAAATTTTTTGGTTGAAGCTTTAGCTACTGCCACCTATACAGTGAATAGAAGCCCATGTGTTTTTATAGACATGAAGACTCATGAAGAAAGATGGACTGAAGCTACCCCTAAGCTCTCTAATCTAAAACCTTTTGGGTGTACAACATATGTCTACATCAAACAAAGCAAGATTGAACCTAGAGCTCTTAAATGTATGTTTATTGGCTACCCTGATGGTGTCAAAGGCTACAAGCTCTGGGATTTCTCTAAAGAAAGAAGCCTAATAAGCAGAGATGTTGTTTTCAAGGAGAATGAAATCTATATGGAGTCTATCAAAGTAATACCGTCTACTAAACAGAATTTGAATGAACCTTCTACCAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTTAAACCCTAGCAGCAGTGATCAACTTCCAACAGAAGCTCTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGCTTAACAAGAGATAGAGGAAGAAGAACCATTAGACCTCCTTCTAGATTTGCAAGAGCAGATCGCATAGCTAACTCCTCTACAGAGACTATAAAAGATGAGCCTTACAGTTATGAAGATGCTCTATACAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGCTGAACTTAATTCACTCTACAAGAAGGATACTTTGAAATTAGTAGAAAAGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAGAAGAAGATGATTGGTGAATTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCAAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTCCCCTGTTGAAAGCACACTTCCATAAGAATCCTACTGGCCATTGTAGCATGTGA

Protein sequence

MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNLISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLDYVHGDLWEPARTHSWGGSRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDKVKFKARLVAKGFKQKEGVDYNEIFPLLKAHFHKNPTGHCSM

Homology

[Close]

BLAST of Cmc11g0303951 vs. NCBI nr
Match: KAA0033501.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK26828.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 912.1 bits (2356), Expect = 2.2e-261
Identity = 468/520 (90.00%), Postives = 478/520 (91.92%), Query Frame = 0


Query: 21  MGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNLISLGMLDGLRCFIYIERGFM 80
           MGNNQDYEIIGVG VLLKLSNNKEVL KGVRHVPKLKRNLISLGMLD LRCFIYIERGFM
Sbjct: 1   MGNNQDYEIIGVGSVLLKLSNNKEVLFKGVRHVPKLKRNLISLGMLDDLRCFIYIERGFM 60

Query: 81  KVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLTELQ 140
           KVERQGRVILNSRKVE LYTVKNVIKPKY+LISETEKGNELELWHQRLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEDLYTVKNVIKPKYSLISETEKGNELELWHQRLSHISEKGLTELQ 120

Query: 141 KQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLDYVHGDLWEPARTHSWGGS- 200
           KQG IQARGVKRLGFCEHCIFDKSKRLKF KGKH SKATLDYVHGDLW PARTHSWGGS 
Sbjct: 121 KQGPIQARGVKRLGFCEHCIFDKSKRLKFSKGKHQSKATLDYVHGDLWGPARTHSWGGSR 180

Query: 201 -RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATYTVNRSPCVFIDM 260
            RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENF VEALATATYTVNRSPCVFIDM
Sbjct: 181 HRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFWVEALATATYTVNRSPCVFIDM 240

Query: 261 KTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMFIGYPDGVKGYKLWDFSKE 320
           KT EERWTE TPKLSNLKPFGCTTYVYIKQSKIEP+ALKCMFIG+PDGVKGYKLWDFSKE
Sbjct: 241 KTPEERWTEDTPKLSNLKPFGCTTYVYIKQSKIEPKALKCMFIGHPDGVKGYKLWDFSKE 300

Query: 321 RSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVEIHSNLKDLNPSSSDQLPTEA 380
           RSLISRDVVFKENEIYMESIKVIPST+QNLNE STSHQVEIHSNLKDLNPSSSDQLPTEA
Sbjct: 301 RSLISRDVVFKENEIYMESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEA 360

Query: 381 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADRIANSSTETIKDEPYSYE 440
           LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARAD IANSSTETIKDEPYSYE
Sbjct: 361 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYE 420

Query: 441 DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDK--- 500
           DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDK   
Sbjct: 421 DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDKHTS 480

Query: 501 VKFKARLVAKGFKQKEGVDYNEIF---PLLKAHFHKNPTG 533
           ++    +VA    + E +D    F    L K  F + P G
Sbjct: 481 IRILLAIVACENLELEQLDVTTAFLHGSLEKEIFMEQPKG 520

[Close]

BLAST of Cmc11g0303951 vs. NCBI nr
Match: KAA0051442.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22211.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 755.4 bits (1949), Expect = 3.4e-214
Identity = 401/525 (76.38%), Postives = 417/525 (79.43%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           MTSKKNWFVDYKSQE DSVYMGNNQD EIIGVG VLLKLS+N+EVLLKG           
Sbjct: 279 MTSKKNWFVDYKSQEGDSVYMGNNQDCEIIGVGSVLLKLSSNREVLLKG----------- 338

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
                                VERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE
Sbjct: 339 ---------------------VERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 398

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
           LELWH+RLSHISEKGLTELQKQG IQ RGVKRLGFCEHCIF KSKR+KF KG+HHSKATL
Sbjct: 399 LELWHRRLSHISEKGLTELQKQGLIQTRGVKRLGFCEHCIFGKSKRMKFSKGEHHSKATL 458

Query: 181 DYVHGDLWEPARTHSWGGSRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEA 240
           DYVHGDLW PARTHSWGGS                 RT  ERVRCMIS+AKI + F  EA
Sbjct: 459 DYVHGDLWGPARTHSWGGS-----------------RTSMERVRCMISEAKISKTFWAEA 518

Query: 241 LATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF 300
           L TATYTVNRSPCV IDMKT EERW  ATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF
Sbjct: 519 LTTATYTVNRSPCVSIDMKTPEERWIGATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF 578

Query: 301 IGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVEIH 360
           IGYPDGVK YKLWDF KERSLISRDVVFKENEIYMESIKVIP+ K NLNEPSTSHQVEIH
Sbjct: 579 IGYPDGVKDYKLWDFFKERSLISRDVVFKENEIYMESIKVIPAEK-NLNEPSTSHQVEIH 638

Query: 361 SNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARAD 420
           SNLK+LNPSSSDQLPTEALPSF+ QEEEEEENAEDLTNYSLTRDRGRRTI+PPSRFARAD
Sbjct: 639 SNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAEDLTNYSLTRDRGRRTIKPPSRFARAD 698

Query: 421 RIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPC 480
            I NSS ETI+D+P SYEDALY                           +KPHGK IIPC
Sbjct: 699 CIVNSSIETIEDKPDSYEDALY---------------------------KKPHGKIIIPC 726

Query: 481 KWVFKKKMIGELNDKVKFKARLVAKGFKQKEGVDYNEIFPLLKAH 526
           KWVFKKKMIG+LNDKVKFKARLVAKGFKQKEGVDYNEIFP +  H
Sbjct: 759 KWVFKKKMIGDLNDKVKFKARLVAKGFKQKEGVDYNEIFPPVVKH 726

[Close]

BLAST of Cmc11g0303951 vs. NCBI nr
Match: KAA0039651.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ95535.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 698.7 bits (1802), Expect = 3.8e-197
Identity = 376/515 (73.01%), Postives = 393/515 (76.31%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           +TSKKNWFVDYKSQE DSVYMGNNQD EIIG+G VLLKLSNN+EVLLKGVRHVPKLKRNL
Sbjct: 44  ITSKKNWFVDYKSQEGDSVYMGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNL 103

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
           ISLGMLD L CFIYIERGFMKVERQG+VILNSRKVEGLYTVKNVIKPKYALISETEKGN+
Sbjct: 104 ISLGMLDDLGCFIYIERGFMKVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNK 163

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
           LELWH+RLSHISEKGLTELQKQG IQARGVK LGFCE CIF KSKRLKF KG+HHSK TL
Sbjct: 164 LELWHRRLSHISEKGLTELQKQGLIQARGVKNLGFCEDCIFSKSKRLKFSKGEHHSKVTL 223

Query: 181 DYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLV 240
           DYVHGDL  PART+SWGGS  RTVAYTPQQNGVAE MNRTL ER                
Sbjct: 224 DYVHGDLCGPARTNSWGGSRHRTVAYTPQQNGVAEMMNRTLMER---------------- 283

Query: 241 EALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKC 300
                                                                       
Sbjct: 284 ------------------------------------------------------------ 343

Query: 301 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVE 360
                          DFSKER LISRDV+FKENEIYM+SIKVIPS + NLNEPSTSHQVE
Sbjct: 344 ---------------DFSKERGLISRDVIFKENEIYMDSIKVIPSAEHNLNEPSTSHQVE 403

Query: 361 IHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFAR 420
           IHSNLKD NPSSSDQLPT+A PSFHPQEEEEEENAEDLTNYSLTRDRGR+TIRPPSRFAR
Sbjct: 404 IHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFAR 463

Query: 421 ADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSII 480
           AD IANSS ETI+DEPYSY+DAL SRHNNQWKEAMN ELNSLYK DT +LVE PHGKSII
Sbjct: 464 ADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSII 467

Query: 481 PCKWVFKKKMIGELNDKVKFKARLVAKGFKQKEGV 514
           PCKWVFKKKMIG LNDKVKFKARLVAKGF+QKE V
Sbjct: 524 PCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEDV 467

[Close]

BLAST of Cmc11g0303951 vs. NCBI nr
Match: TYK27723.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 634.4 bits (1635), Expect = 8.8e-178
Identity = 350/513 (68.23%), Postives = 364/513 (70.96%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           MTSKKNWFV+YKSQE DSV MGNNQD EIIGVG VLLK SNN EVLLKG           
Sbjct: 324 MTSKKNWFVNYKSQEGDSVPMGNNQDCEIIGVGSVLLKPSNNMEVLLKG----------- 383

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
                                                                       
Sbjct: 384 ------------------------------------------------------------ 443

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
                                                      SKRLKF KG+HHSKATL
Sbjct: 444 -------------------------------------------SKRLKFSKGEHHSKATL 503

Query: 181 DYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLV 240
           DYVHGDLW PARTHSWGGS  RT AYTPQQNGV ERMNRTL ER RCM+S+AKI ENF  
Sbjct: 504 DYVHGDLWGPARTHSWGGSRHRTFAYTPQQNGVVERMNRTLMERKRCMVSEAKISENFWA 563

Query: 241 EALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKC 300
           EALA+ATYT+NRSPCV  DMKT EERWT AT KLSNLKPFGCT YVYIKQSKIEPRALKC
Sbjct: 564 EALASATYTMNRSPCVSTDMKTPEERWTGATSKLSNLKPFGCTAYVYIKQSKIEPRALKC 623

Query: 301 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVE 360
           MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIP+ K N NEPSTSHQVE
Sbjct: 624 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPAEK-NFNEPSTSHQVE 683

Query: 361 IHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFAR 420
           IHSNLK+LNPSSSDQLPTEALPSF+ QEEEEE+NAEDLTNYSLTRDRGRRTIRPPSRFAR
Sbjct: 684 IHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEKNAEDLTNYSLTRDRGRRTIRPPSRFAR 721

Query: 421 ADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSII 480
           AD IANSSTETI+DE  SYEDALYS+HNNQWKEAMN ELNSLYK DT +LVEKPHGKSII
Sbjct: 744 ADCIANSSTETIEDETDSYEDALYSKHNNQWKEAMNDELNSLYKNDTWELVEKPHGKSII 721

Query: 481 PCKWVFKKKMIGELNDKVKFKARLVAKGFKQKE 512
           PCK VFKKKMIG+LNDKVKFKARLVAKGFKQ E
Sbjct: 804 PCKSVFKKKMIGDLNDKVKFKARLVAKGFKQNE 721

[Close]

BLAST of Cmc11g0303951 vs. NCBI nr
Match: KAA0054988.1 (hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 565.8 bits (1457), Expect = 3.8e-157
Identity = 313/476 (65.76%), Postives = 323/476 (67.86%), Query Frame = 0


Query: 51  RHVPKLKRNLISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYA 110
           RHVPKLKRNLISLGMLD L CFIYIERGFMKVERQGRVILNSRKVE LYTVKNVIKPKYA
Sbjct: 294 RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGRVILNSRKVEDLYTVKNVIKPKYA 353

Query: 111 LISETEKGNELELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFF 170
           LISETEK NELELWHQRLSHISEKGLTELQK G IQ RGVKRLGFCEHCIF KSKRLKF 
Sbjct: 354 LISETEKENELELWHQRLSHISEKGLTELQKHGLIQTRGVKRLGFCEHCIFGKSKRLKFS 413

Query: 171 KGKHHSKATLDYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMIS 230
           KG+HH+KATLDYVHGDLW PARTHSWGGS  RTVAYTPQQNGVAERMNRTL ERVRCMIS
Sbjct: 414 KGEHHTKATLDYVHGDLWGPARTHSWGGSRHRTVAYTPQQNGVAERMNRTLMERVRCMIS 473

Query: 231 KAKILENFLVEALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQ 290
           +AKI ENF  EALATATYTV RS CV IDMKT EERWT ATPKLSNLKPFGCTTYVYIKQ
Sbjct: 474 EAKISENFWAEALATATYTVTRSLCVSIDMKTPEERWTGATPKLSNLKPFGCTTYVYIKQ 533

Query: 291 SKIEPRALKCMFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNL 350
           SKIEPRALK                                                   
Sbjct: 534 SKIEPRALK--------------------------------------------------- 593

Query: 351 NEPSTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRR 410
                                                                       
Sbjct: 594 ------------------------------------------------------------ 647

Query: 411 TIRPPSRFARADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKL 470
                  + R    ANSSTETI+DEP SYEDALYS+H NQWKEAMN ELNSLYK DT +L
Sbjct: 654 -------YCR----ANSSTETIEDEPDSYEDALYSKHRNQWKEAMNDELNSLYKNDTWEL 647

Query: 471 VEKPHGKSIIPCKWVFKKKMIGELNDKVKFKARLVAKGFKQKEGVDYNEIF-PLLK 524
           VEKPH KSIIPCKWVFKKKMI +LNDKVK KARLVAKGFKQKEGVDYNEIF P++K
Sbjct: 714 VEKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEGVDYNEIFSPVVK 647

[Close]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.3e-62
Identity = 186/607 (30.64%), Postives = 285/607 (46.95%), Query Frame = 0


Query: 2   TSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNLI 61
           T  ++ F  Y + +  +V MGN    +I G+G + +K +    ++LK VRHVP L+ NLI
Sbjct: 305 TPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLI 364

Query: 62  SLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNEL 121
           S   LD      Y      ++ +   VI        LY     I      ++  +    +
Sbjct: 365 SGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEI--CQGELNAAQDEISV 424

Query: 122 ELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLD 181
           +LWH+R+ H+SEKGL  L K+  I       +  C++C+F K  R+ F          LD
Sbjct: 425 DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILD 484

Query: 182 YVHGDLWEPARTHSWGGS------------------------------------------ 241
            V+ D+  P    S GG+                                          
Sbjct: 485 LVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGR 544

Query: 242 ------------------------------RTVAYTPQQNGVAERMNRTLRERVRCMISK 301
                                         +TV  TPQ NGVAERMNRT+ E+VR M+  
Sbjct: 545 KLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRM 604

Query: 302 AKILENFLVEALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYI--- 361
           AK+ ++F  EA+ TA Y +NRSP V +  +  E  WT      S+LK FGC  + ++   
Sbjct: 605 AKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKE 664

Query: 362 KQSKIEPRALKCMFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEI-----YMESIK-- 421
           +++K++ +++ C+FIGY D   GY+LWD  K++ + SRDVVF+E+E+       E +K  
Sbjct: 665 QRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNG 724

Query: 422 VIPSTKQNLNEPSTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNY 481
           +IP+    +  PSTS+      +  D   S   + P E +     Q E+ +E  E++ + 
Sbjct: 725 IIPNF---VTIPSTSNNPTSAESTTD-EVSEQGEQPGEVI----EQGEQLDEGVEEVEHP 784

Query: 482 SLTRDRGRRTIRPPSRFARADRIANSSTETIKD--EPYSYEDALYSRHNNQWKEAMNAEL 524
           +   ++ +   R       + R  ++    I D  EP S ++ L     NQ  +AM  E+
Sbjct: 785 TQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEM 844

[Close]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 170.2 bits (430), Expect = 6.2e-41
Identity = 168/649 (25.89%), Postives = 263/649 (40.52%), Query Frame = 0


Query: 36  LLKLSNNKEVLLKGVRHVPKLKRNLISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKV 95
           +++L N+ E+ L+ V    +   NL+S+  L      I  ++  + + + G +++   K 
Sbjct: 334 IVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVV---KN 393

Query: 96  EGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLTELQKQGSIQARGVKR--- 155
            G+     VI  +   I+   K N   LWH+R  HIS+  L E++++     + +     
Sbjct: 394 SGMLNNVPVINFQAYSINAKHK-NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE 453

Query: 156 --LGFCEHCIFDKSKRLKF--FKGKHHSKATLDYVHGDLWEP------------------ 215
                CE C+  K  RL F   K K H K  L  VH D+  P                  
Sbjct: 454 LSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQ 513

Query: 216 ------------------------------------------ARTHSWGGSR-------- 275
                                                      R +     R        
Sbjct: 514 FTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGI 573

Query: 276 ----TVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATYTVNRSP--CV 335
               TV +TPQ NGV+ERM RT+ E+ R M+S AK+ ++F  EA+ TATY +NR P   +
Sbjct: 574 SYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRAL 633

Query: 336 FIDMKTHEERWTEATPKLSNLKPFGCTTYVYI--KQSKIEPRALKCMFIGYPDGVKGYKL 395
               KT  E W    P L +L+ FG T YV+I  KQ K + ++ K +F+GY     G+KL
Sbjct: 634 VDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKL 693

Query: 396 WDFSKERSLISRDVVFKE-NEIYMESIK----VIPSTKQNLNE--------------PST 455
           WD   E+ +++RDVV  E N +   ++K     +  +K++ N+              P+ 
Sbjct: 694 WDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNE 753

Query: 456 SHQVEIHSNLKDLNPSSSDQLP-------------------------------------- 515
           S + +    LKD   S +   P                                      
Sbjct: 754 SKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNES 813

Query: 516 ---------TEALPSFHPQEEEEEENAEDLTNYSL---TRDRG---------RRTIRPPS 520
                     E+  S +P E  E E AE L    +   T++ G         R   +P  
Sbjct: 814 KKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQI 873

[Close]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 7.3e-18
Identity = 106/448 (23.66%), Postives = 177/448 (39.51%), Query Frame = 0


Query: 187  LWEPARTHSWGGSRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATY 246
            LWE    H      +  +TP+ NG++ER +R + E    ++S A I + +   A A A Y
Sbjct: 600  LWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVY 659

Query: 247  TVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIK---QSKIEPRALKCMFIGY 306
             +NR P   + +++  ++    +P    L+ FGC  Y +++   Q K++ ++ +C+F+GY
Sbjct: 660  LINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGY 719

Query: 307  PDGVKGYKLWDFSKERSLISRDVVFKEN----EIYMESIK-----------------VIP 366
                  Y        R  ISR V F EN      Y+ ++                   +P
Sbjct: 720  SLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLP 779

Query: 367  STKQNLNEPSTS---HQVEIHS-----------NLKDLNPSSSDQLPTEALPSF----HP 426
            +    L  PS S   H     S           +  +L+ S S   P+   P+      P
Sbjct: 780  TRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGP 839

Query: 427  QEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARA------------------------- 486
            Q   +    +  T+ S    +   T   PS+ A++                         
Sbjct: 840  QPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSP 899

Query: 487  -------------DRIANSSTET---------------IKDEP-YSY----------EDA 525
                          +I N++ +                IK  P YS             A
Sbjct: 900  TPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTA 959

[Close]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.8e-17
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 78  GFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLT 137
           G +KV +  R IL   + + LY ++  ++   + ++ET K +E  LWH RL+H+S++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 138 ELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLDYVHGDLW 189
            L K+G + +  V  L FCE CI+ K+ R+ F  G+H +K  LDYVH DLW
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLW 136

[Close]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-14
Identity = 103/444 (23.20%), Postives = 171/444 (38.51%), Query Frame = 0


Query: 204  YTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATYTVNRSPCVFIDMKTHEE 263
            +TP+ NG++ER +R + E    ++S A + + +   A + A Y +NR P   + +++  +
Sbjct: 596  HTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 655

Query: 264  RWTEATPKLSNLKPFGCTTYVYIK---QSKIEPRALKCMFIGYPDGVKGYKLWDFSKERS 323
            +     P    LK FGC  Y +++   + K+E ++ +C F+GY      Y        R 
Sbjct: 656  KLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRL 715

Query: 324  LISRDVVFKENEIYMESIKVIPSTKQ---------------------------------- 383
              SR V F E      +     ST Q                                  
Sbjct: 716  YTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLD 775

Query: 384  -------------------------NLNEPSTS----------------HQVE-IHSNLK 443
                                     +++ PS+S                HQ +  +SN  
Sbjct: 776  TSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSP 835

Query: 444  DLN---------------------PSSSDQLPTEA------------------LPSFHPQ 503
             LN                     P SS  +PT +                  LP   P 
Sbjct: 836  ILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPA 895

Query: 504  EEEEEENAEDLTNYSLTRDRGRRTIRPPS-RFARADRIANSSTETIKDEPYSYEDALYSR 525
                + NA+   N      R +  IR P+ +++ A  +A +S      EP     A+ + 
Sbjct: 896  PPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANS------EP---RTAIQAM 955

[Close]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL
Match: A0A5A7SVP7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00170 PE=4 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 1.1e-261
Identity = 468/520 (90.00%), Postives = 478/520 (91.92%), Query Frame = 0


Query: 21  MGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNLISLGMLDGLRCFIYIERGFM 80
           MGNNQDYEIIGVG VLLKLSNNKEVL KGVRHVPKLKRNLISLGMLD LRCFIYIERGFM
Sbjct: 1   MGNNQDYEIIGVGSVLLKLSNNKEVLFKGVRHVPKLKRNLISLGMLDDLRCFIYIERGFM 60

Query: 81  KVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLTELQ 140
           KVERQGRVILNSRKVE LYTVKNVIKPKY+LISETEKGNELELWHQRLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEDLYTVKNVIKPKYSLISETEKGNELELWHQRLSHISEKGLTELQ 120

Query: 141 KQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLDYVHGDLWEPARTHSWGGS- 200
           KQG IQARGVKRLGFCEHCIFDKSKRLKF KGKH SKATLDYVHGDLW PARTHSWGGS 
Sbjct: 121 KQGPIQARGVKRLGFCEHCIFDKSKRLKFSKGKHQSKATLDYVHGDLWGPARTHSWGGSR 180

Query: 201 -RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEALATATYTVNRSPCVFIDM 260
            RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENF VEALATATYTVNRSPCVFIDM
Sbjct: 181 HRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFWVEALATATYTVNRSPCVFIDM 240

Query: 261 KTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMFIGYPDGVKGYKLWDFSKE 320
           KT EERWTE TPKLSNLKPFGCTTYVYIKQSKIEP+ALKCMFIG+PDGVKGYKLWDFSKE
Sbjct: 241 KTPEERWTEDTPKLSNLKPFGCTTYVYIKQSKIEPKALKCMFIGHPDGVKGYKLWDFSKE 300

Query: 321 RSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVEIHSNLKDLNPSSSDQLPTEA 380
           RSLISRDVVFKENEIYMESIKVIPST+QNLNE STSHQVEIHSNLKDLNPSSSDQLPTEA
Sbjct: 301 RSLISRDVVFKENEIYMESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEA 360

Query: 381 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADRIANSSTETIKDEPYSYE 440
           LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARAD IANSSTETIKDEPYSYE
Sbjct: 361 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYE 420

Query: 441 DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDK--- 500
           DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDK   
Sbjct: 421 DALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELNDKHTS 480

Query: 501 VKFKARLVAKGFKQKEGVDYNEIF---PLLKAHFHKNPTG 533
           ++    +VA    + E +D    F    L K  F + P G
Sbjct: 481 IRILLAIVACENLELEQLDVTTAFLHGSLEKEIFMEQPKG 520

[Close]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL
Match: A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 1.7e-214
Identity = 401/525 (76.38%), Postives = 417/525 (79.43%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           MTSKKNWFVDYKSQE DSVYMGNNQD EIIGVG VLLKLS+N+EVLLKG           
Sbjct: 279 MTSKKNWFVDYKSQEGDSVYMGNNQDCEIIGVGSVLLKLSSNREVLLKG----------- 338

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
                                VERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE
Sbjct: 339 ---------------------VERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 398

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
           LELWH+RLSHISEKGLTELQKQG IQ RGVKRLGFCEHCIF KSKR+KF KG+HHSKATL
Sbjct: 399 LELWHRRLSHISEKGLTELQKQGLIQTRGVKRLGFCEHCIFGKSKRMKFSKGEHHSKATL 458

Query: 181 DYVHGDLWEPARTHSWGGSRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLVEA 240
           DYVHGDLW PARTHSWGGS                 RT  ERVRCMIS+AKI + F  EA
Sbjct: 459 DYVHGDLWGPARTHSWGGS-----------------RTSMERVRCMISEAKISKTFWAEA 518

Query: 241 LATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF 300
           L TATYTVNRSPCV IDMKT EERW  ATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF
Sbjct: 519 LTTATYTVNRSPCVSIDMKTPEERWIGATPKLSNLKPFGCTTYVYIKQSKIEPRALKCMF 578

Query: 301 IGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVEIH 360
           IGYPDGVK YKLWDF KERSLISRDVVFKENEIYMESIKVIP+ K NLNEPSTSHQVEIH
Sbjct: 579 IGYPDGVKDYKLWDFFKERSLISRDVVFKENEIYMESIKVIPAEK-NLNEPSTSHQVEIH 638

Query: 361 SNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARAD 420
           SNLK+LNPSSSDQLPTEALPSF+ QEEEEEENAEDLTNYSLTRDRGRRTI+PPSRFARAD
Sbjct: 639 SNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAEDLTNYSLTRDRGRRTIKPPSRFARAD 698

Query: 421 RIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPC 480
            I NSS ETI+D+P SYEDALY                           +KPHGK IIPC
Sbjct: 699 CIVNSSIETIEDKPDSYEDALY---------------------------KKPHGKIIIPC 726

Query: 481 KWVFKKKMIGELNDKVKFKARLVAKGFKQKEGVDYNEIFPLLKAH 526
           KWVFKKKMIG+LNDKVKFKARLVAKGFKQKEGVDYNEIFP +  H
Sbjct: 759 KWVFKKKMIGDLNDKVKFKARLVAKGFKQKEGVDYNEIFPPVVKH 726

[Close]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL
Match: A0A5D3BAM8 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00260 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.8e-197
Identity = 376/515 (73.01%), Postives = 393/515 (76.31%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           +TSKKNWFVDYKSQE DSVYMGNNQD EIIG+G VLLKLSNN+EVLLKGVRHVPKLKRNL
Sbjct: 44  ITSKKNWFVDYKSQEGDSVYMGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNL 103

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
           ISLGMLD L CFIYIERGFMKVERQG+VILNSRKVEGLYTVKNVIKPKYALISETEKGN+
Sbjct: 104 ISLGMLDDLGCFIYIERGFMKVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNK 163

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
           LELWH+RLSHISEKGLTELQKQG IQARGVK LGFCE CIF KSKRLKF KG+HHSK TL
Sbjct: 164 LELWHRRLSHISEKGLTELQKQGLIQARGVKNLGFCEDCIFSKSKRLKFSKGEHHSKVTL 223

Query: 181 DYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLV 240
           DYVHGDL  PART+SWGGS  RTVAYTPQQNGVAE MNRTL ER                
Sbjct: 224 DYVHGDLCGPARTNSWGGSRHRTVAYTPQQNGVAEMMNRTLMER---------------- 283

Query: 241 EALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKC 300
                                                                       
Sbjct: 284 ------------------------------------------------------------ 343

Query: 301 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVE 360
                          DFSKER LISRDV+FKENEIYM+SIKVIPS + NLNEPSTSHQVE
Sbjct: 344 ---------------DFSKERGLISRDVIFKENEIYMDSIKVIPSAEHNLNEPSTSHQVE 403

Query: 361 IHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFAR 420
           IHSNLKD NPSSSDQLPT+A PSFHPQEEEEEENAEDLTNYSLTRDRGR+TIRPPSRFAR
Sbjct: 404 IHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFAR 463

Query: 421 ADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSII 480
           AD IANSS ETI+DEPYSY+DAL SRHNNQWKEAMN ELNSLYK DT +LVE PHGKSII
Sbjct: 464 ADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSII 467

Query: 481 PCKWVFKKKMIGELNDKVKFKARLVAKGFKQKEGV 514
           PCKWVFKKKMIG LNDKVKFKARLVAKGF+QKE V
Sbjct: 524 PCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEDV 467

[Close]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL
Match: A0A5D3DVM0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00690 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.3e-178
Identity = 350/513 (68.23%), Postives = 364/513 (70.96%), Query Frame = 0


Query: 1   MTSKKNWFVDYKSQERDSVYMGNNQDYEIIGVGPVLLKLSNNKEVLLKGVRHVPKLKRNL 60
           MTSKKNWFV+YKSQE DSV MGNNQD EIIGVG VLLK SNN EVLLKG           
Sbjct: 324 MTSKKNWFVNYKSQEGDSVPMGNNQDCEIIGVGSVLLKPSNNMEVLLKG----------- 383

Query: 61  ISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNE 120
                                                                       
Sbjct: 384 ------------------------------------------------------------ 443

Query: 121 LELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATL 180
                                                      SKRLKF KG+HHSKATL
Sbjct: 444 -------------------------------------------SKRLKFSKGEHHSKATL 503

Query: 181 DYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFLV 240
           DYVHGDLW PARTHSWGGS  RT AYTPQQNGV ERMNRTL ER RCM+S+AKI ENF  
Sbjct: 504 DYVHGDLWGPARTHSWGGSRHRTFAYTPQQNGVVERMNRTLMERKRCMVSEAKISENFWA 563

Query: 241 EALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQSKIEPRALKC 300
           EALA+ATYT+NRSPCV  DMKT EERWT AT KLSNLKPFGCT YVYIKQSKIEPRALKC
Sbjct: 564 EALASATYTMNRSPCVSTDMKTPEERWTGATSKLSNLKPFGCTAYVYIKQSKIEPRALKC 623

Query: 301 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNLNEPSTSHQVE 360
           MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIP+ K N NEPSTSHQVE
Sbjct: 624 MFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPAEK-NFNEPSTSHQVE 683

Query: 361 IHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFAR 420
           IHSNLK+LNPSSSDQLPTEALPSF+ QEEEEE+NAEDLTNYSLTRDRGRRTIRPPSRFAR
Sbjct: 684 IHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEKNAEDLTNYSLTRDRGRRTIRPPSRFAR 721

Query: 421 ADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSII 480
           AD IANSSTETI+DE  SYEDALYS+HNNQWKEAMN ELNSLYK DT +LVEKPHGKSII
Sbjct: 744 ADCIANSSTETIEDETDSYEDALYSKHNNQWKEAMNDELNSLYKNDTWELVEKPHGKSII 721

Query: 481 PCKWVFKKKMIGELNDKVKFKARLVAKGFKQKE 512
           PCK VFKKKMIG+LNDKVKFKARLVAKGFKQ E
Sbjct: 804 PCKSVFKKKMIGDLNDKVKFKARLVAKGFKQNE 721

[Close]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL
Match: A0A5A7UJ23 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001360 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.9e-157
Identity = 313/476 (65.76%), Postives = 323/476 (67.86%), Query Frame = 0


Query: 51  RHVPKLKRNLISLGMLDGLRCFIYIERGFMKVERQGRVILNSRKVEGLYTVKNVIKPKYA 110
           RHVPKLKRNLISLGMLD L CFIYIERGFMKVERQGRVILNSRKVE LYTVKNVIKPKYA
Sbjct: 294 RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGRVILNSRKVEDLYTVKNVIKPKYA 353

Query: 111 LISETEKGNELELWHQRLSHISEKGLTELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFF 170
           LISETEK NELELWHQRLSHISEKGLTELQK G IQ RGVKRLGFCEHCIF KSKRLKF 
Sbjct: 354 LISETEKENELELWHQRLSHISEKGLTELQKHGLIQTRGVKRLGFCEHCIFGKSKRLKFS 413

Query: 171 KGKHHSKATLDYVHGDLWEPARTHSWGGS--RTVAYTPQQNGVAERMNRTLRERVRCMIS 230
           KG+HH+KATLDYVHGDLW PARTHSWGGS  RTVAYTPQQNGVAERMNRTL ERVRCMIS
Sbjct: 414 KGEHHTKATLDYVHGDLWGPARTHSWGGSRHRTVAYTPQQNGVAERMNRTLMERVRCMIS 473

Query: 231 KAKILENFLVEALATATYTVNRSPCVFIDMKTHEERWTEATPKLSNLKPFGCTTYVYIKQ 290
           +AKI ENF  EALATATYTV RS CV IDMKT EERWT ATPKLSNLKPFGCTTYVYIKQ
Sbjct: 474 EAKISENFWAEALATATYTVTRSLCVSIDMKTPEERWTGATPKLSNLKPFGCTTYVYIKQ 533

Query: 291 SKIEPRALKCMFIGYPDGVKGYKLWDFSKERSLISRDVVFKENEIYMESIKVIPSTKQNL 350
           SKIEPRALK                                                   
Sbjct: 534 SKIEPRALK--------------------------------------------------- 593

Query: 351 NEPSTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYSLTRDRGRR 410
                                                                       
Sbjct: 594 ------------------------------------------------------------ 647

Query: 411 TIRPPSRFARADRIANSSTETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKL 470
                  + R    ANSSTETI+DEP SYEDALYS+H NQWKEAMN ELNSLYK DT +L
Sbjct: 654 -------YCR----ANSSTETIEDEPDSYEDALYSKHRNQWKEAMNDELNSLYKNDTWEL 647

Query: 471 VEKPHGKSIIPCKWVFKKKMIGELNDKVKFKARLVAKGFKQKEGVDYNEIF-PLLK 524
           VEKPH KSIIPCKWVFKKKMI +LNDKVK KARLVAKGFKQKEGVDYNEIF P++K
Sbjct: 714 VEKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEGVDYNEIFSPVVK 647

[Close]

BLAST of Cmc11g0303951 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 91.7 bits (226), Expect = 2.0e-18
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 78  GFMKVERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHQRLSHISEKGLT 137
           G +KV +  R IL   + + LY ++  ++   + ++ET K +E  LWH RL+H+S++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 138 ELQKQGSIQARGVKRLGFCEHCIFDKSKRLKFFKGKHHSKATLDYVHGDLW 189
            L K+G + +  V  L FCE CI+ K+ R+ F  G+H +K  LDYVH DLW
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLW 136

[Close]

BLAST of Cmc11g0303951 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 6.8e-11
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 215 MNRTLRERVRCMISKAKILENFLVEALATATYTVNRSPCVFIDMKTHEERWTEATPKLSN 274
           MNRT+ E+VR M+ +  + + F  +A  TA + +N+ P   I+    +E W ++ P  S 
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 275 LKPFGCTTYVYIKQSKIEPRALK 298
           L+ FGC  Y++  + K++PRA K
Sbjct: 61  LRRFGCVAYIHCDEGKLKPRAKK 83

[Close]

BLAST of Cmc11g0303951 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 63.5 bits (153), Expect = 5.8e-10
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 427 TETIKDEPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKK 486
           T TIK EP S    +++  +  W +AM  EL++L +  T  LV  P  ++I+ CKWVFK 
Sbjct: 21  TTTIKKEPKS---VIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKT 80

Query: 487 KMIGELNDKVKFKARLVAKGFKQKEGVDYNEIF 520
           K+  +     + KARLVAKGF Q+EG+ + E +
Sbjct: 81  KLHSD-GTLDRLKARLVAKGFHQEEGIYFVETY 109

[Close]

BLAST of Cmc11g0303951 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-07
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 433 EPYSYEDALYSRHNNQWKEAMNAELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGEL 492
           EP +Y +A   +    W  AM+ E+ ++    T ++   P  K  I CKWV+K K   + 
Sbjct: 85  EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD- 144

Query: 493 NDKVKFKARLVAKGFKQKEGVDYNEIF 520
               ++KARLVAKG+ Q+EG+D+ E F
Sbjct: 145 GTIERYKARLVAKGYTQQEGIDFIETF 167

The following BLAST results are available for this feature:

BLAST of Cmc11g0303951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033501.1	2.2e-261	90.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0051442.1	3.4e-214	76.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0039651.1	3.8e-197	73.01	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]
TYK27723.1	8.8e-178	68.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0054988.1	3.8e-157	65.76	hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0303951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	6.3e-62	30.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.2e-41	25.89	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	7.3e-18	23.66	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P93293	2.8e-17	39.64	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	1.3e-14	23.20	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc11g0303951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVP7	1.1e-261	90.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U6R2	1.7e-214	76.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BAM8	1.8e-197	73.01	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]
A0A5D3DVM0	4.3e-178	68.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UJ23	1.9e-157	65.76	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Cmc11g0303951 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00300.1	2.0e-18	39.64	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	6.8e-11	34.94	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00820.1	5.8e-10	40.86	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	7.8e-07	36.78	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 464..519 e-value: 2.0E-11 score: 44.0
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 98..164 e-value: 2.0E-9 score: 37.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 192..265 e-value: 1.5E-12 score: 49.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..408
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 200..520
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 192..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303951.1	Cmc11g0303951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding