Cmc11g0303831 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303831
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr11: 25389732 .. 25392446 (+)
RNA-Seq Expression	Cmc11g0303831
Synteny	Cmc11g0303831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATGTATATGTTGATATAATCTTATGTGGTAGTCCTCAATCCTTGGTTGGCAAGTTTATTACACAAATGCAAACTGAATTTGAAGTGAGTATGGTTAGAGAACTCTCCTACTTTCTTGGTTAATGGAATTGTTATAACTCAAACAAACGTCAAACATCTTGTTAAGAAATTCAACCTCCATCAAGCTCAACTTAGAACTCCTACTAGCAGAAGTACTAAACACTCCAAAAACAGTGATGCGATTATTGTTGAGGAAAGTCTTTATAAAAACATGATTAGAGGACTACTTTACCTCACAGCTAGCCGTCCTAATATCATGCTTGTGTTACGGTGTATGTGCTCTTTATCAATATGCTTTATCAATATGCCCTTAAATCTTCACATCTTGCCTCTGTCAAAAGAATTCTTAAACATGTTCTTGGTACTTCTGATTATGGTATGTGGTATTCTTGTGACACCACTGCCACCCTTGTTGGTTTTTACTATATAGATTGGATTGATTGTTCTAAGGATAGAGAGAGCACTCTCGGTGAATGTTTCTTTCTTGTCAATAATCCTATTTCATGCTTCAGCAAAAGGCATAACTGTGTTTCTCTGTAAGTAGTTGTTCATGATATTCCTTGAACATGATATCATGTTGATCATAACACTCAAAACGTCTACTCAACCATTACGGTGTTTCTTGTCTACACATGAGTATAATGTCATAATACATCAAACTTAGGATTGTCGTAATACACCCATGTTTTGGGCACCTCTTTGGAAACCCGAGTCAATAAATTGGCAGTCTTCTTTGTCACATTAAAAACAACTTCACATTTATAAGGTTTATATCTGTATATCAAATCATTGTTTATCTAATATATAAATTGTGTATCAATAACCATACAACAAGAAAAGAAAAATAACTGCAATGTATATGAACACGAGCTTTTGACAACAATATCTAATATTTGGTAAAATTTATAAAATATTGGGTAAAATATGAATGATTAAATATTTTTACATTATTCCTATCAAGTAAAATATGAATCTACAAACTTCTATAAATAATATCCTAATACAAACTTTGATAGATAATATTGTCATAAATGTGTATTAAATCACGTTTAACTTCTATCTGATTCTATTTGATTCCTAAGTTATTAATTTATTGTGACTCTATTTAACAATAATTTTATTTTCCAAAGTGAGTTCTTTCTTCTCTACCCACCTTCCAATAATTGATAAAAACATACATCAGCAATTGAGGAGGTACACTTTACTATAAGAAGCTAATTCAAACCCCATTGGATCATGAAGTTACTCATTGGAACCCAAGAAAGTTCGAACATTGATCTTGTTTCTTAACTTGTACTAGGATTTCCCCCCTGTATTCACATCAATTGAATCCTAAATTTTGTCGAACATTTATCATTTTCTGCACCTTAACCAGTTACAAGCAAATTTGCCACCATTGTTGTTTCATCTCTTTTATTTATTAGGTACTACAAGATTCCAGTTCCTTTTCATTCTCGGTTTTCAATTCTTTTTTCATTACGGGTGCATGTGCTATGTCATCATCTCTACTGTGAAAAAGGCTTTCATTAGCTTTCTGAAAGAGAATCCATAATCTTGATCAAGTACCGAACGTAAGTACTGAAAATGTTCAAGGCTAGATGTTGAAAGTTGTTTTTCCAAGCTATGAGGCTATCATCTCACATTAATTTAGCACATTTAGAAGACAAATTTCTCCATTTCATATAGAGATTAAGAATTTTTAGGCTTCAGTAATTCATTCCACCATATCTCTGTGGTCATAGAACTCCCTGTGTTCTTAATTCTGGCAAAGTGGGGGGTTTGATCAATTTACATATATATCTTTAAAGTGTCCCTTTGACTTAAGTTTTTAAATGTTTCAATATAATATTGTTCTACAGTTAAAAATACTAATTTAATCCCTTCCAACAACTGAATAAATGGTTCAGAAAAAAAATTCACCCTCTAAGGATTTTCAAAATCATCCAGTTTCTTAAAATTAAAAAACTGAATGTTCAAGGCTGCTTGGAGGAAGATTCACGAAAATGTTTGAAAAATCCTCTCAAATAGGCCTCGAAGTATAAAAACACTTTGCTGTCTGCCTCCTAACTAAGCACAATATGAAACCCTAAATTATGTTCACACGGCTACTCAAAGAGGCATTTCCACCATTACAATAAAAAAATTCACATATTAACCTATCAGACTACTCAAATTTGTCTAATCCGAACGCCTCGATTATGATCCAGCATTCAAAATCAATCCTAAGTACAGAAACCTTTAGTTAATTAATTATTAACACAATCGAGAAACCTAGGGGAAAATTCCAGCCAATTCGCAATAGCTTTTCATATGAAAAAGATTTACGAATAAATCAAAAGCGATGAAGCAAACAAATTGTTTAAGAACAGGAGATTAAGAGAACGAAATGAGAATGTAGGTCTAAACCAGGCCCCCAAATCAGAAAGAATCAGAGGGAGCAGACATGTTGACCTGTGAATTCGATCTCTGTGCACACTACCATGCTTCCTTCATTCCTTTATTCCAGAGCATCGGCTTATTGTACACAGACGGATTCCATAAAACCCTAAAATGAAAACTCTTATGCCCTACAAAGAAGCGAAGAACAAAACAACAAAGCAAAAGAAAGGAATTTAAAGAAAAAAAACACGATTGATAGATAAGAAAGAAGGGT

mRNA sequence

CTCATGTATATGTTGATATAATCTTATGTGGTAGTCCTCAATCCTTGGTTGGCAAGTTTATTACACAAATGCAAACTGAATTTGAAGTGAGTATGGTTAGAGAACTCTCCTACTTTCTTGGTTAATGGAATTGTTATAACTCAAACAAACGTCAAACATCTTGTTAAGAAATTCAACCTCCATCAAGCTCAACTTAGAACTCCTACTAGCAGAAGTACTAAACACTCCAAAAACAGTGATGCGATTATTGTTGAGGAAAGTCTTTATAAAAACATGATTAGAGGACTACTTTACCTCACAGCTAGCCGTCCTAATATCATGCTTGTGTTACGGTGTATGTGCTCTTTATCAATATGCTTTATCAATATGCCCTTAAATCTTCACATCTTGCCTCTGTCAAAAGAATTCTTAAACATGTTCTTGGTACTTCTGATTATGGTATGTGGTATTCTTGTGACACCACTGCCACCCTTGTTGGTTTTTACTATATAGATTGGATTGATTGTTCTAAGGATAGAGAGAGCACTCTCGGTGAATGTTTCTTTCTTGTCAATAATCCTATTTCATGCTTCAGCAAAAGGCATAACTGTGTTTCTCTGTAAGTAGTTGTTCATGATATTCCTTGAACATGATATCATGTTGATCATAACACTCAAAACGTCTACTCAACCATTACGGTGTTTCTTGTCTACACATGAGTATAATGTCATAATACATCAAACTTAGGATTGTCGTAATACACCCATGTTTTGGGCACCTCTTTGGAAACCCGAGTCAATAAATTGGCAGTCTTCTTTGTCACATTAAAAACAACTTCACATTTATAAGGTTTATATCTGTATATCAAATCATTGTTTATCTAATATATAAATTGTGTATCAATAACCATACAACAAGAAAAGAAAAATAACTGCAATGTATATGAACACGAGCTTTTGACAACAATATCTAATATTTGGTAAAATTTATAAAATATTGGGTAAAATATGAATGATTAAATATTTTTACATTATTCCTATCAAGTAAAATATGAATCTACAAACTTCTATAAATAATATCCTAATACAAACTTTGATAGATAATATTGTCATAAATGTGTATTAAATCACGTTTAACTTCTATCTGATTCTATTTGATTCCTAAGTTATTAATTTATTGTGACTCTATTTAACAATAATTTTATTTTCCAAAGTGAGTTCTTTCTTCTCTACCCACCTTCCAATAATTGATAAAAACATACATCAGCAATTGAGGAGGTACACTTTACTATAAGAAGCTAATTCAAACCCCATTGGATCATGAAGTTACTCATTGGAACCCAAGAAAGTTCGAACATTGATCTTGTTTCTTAACTTGTACTAGGATTTCCCCCCTGTATTCACATCAATTGAATCCTAAATTTTGTCGAACATTTATCATTTTCTGCACCTTAACCAGTTACAAGCAAATTTGCCACCATTGTTGTTTCATCTCTTTTATTTATTAGGTACTACAAGATTCCAGTTCCTTTTCATTCTCGGTTTTCAATTCTTTTTTCATTACGGGTGCATGTGCTATGTCATCATCTCTACTGTGAAAAAGGCTTTCATTAGCTTTCTGAAAGAGAATCCATAATCTTGATCAAGTACCGAACGTAAGTACTGAAAATGTTCAAGGCTAGATGTTGAAAGTTGTTTTTCCAAGCTATGAGGCTATCATCTCACATTAATTTAGCACATTTAGAAGACAAATTTCTCCATTTCATATAGAGATTAAGAATTTTTAGGCTTCAGTAATTCATTCCACCATATCTCTGTGGTCATAGAACTCCCTGTGTTCTTAATTCTGGCAAAGTGGGGGGTTTGATCAATTTACATATATATCTTTAAAGTGTCCCTTTGACTTAAGTTTTTAAATGTTTCAATATAATATTGTTCTACAGTTAAAAATACTAATTTAATCCCTTCCAACAACTGAATAAATGGTTCAGAAAAAAAATTCACCCTCTAAGGATTTTCAAAATCATCCAGTTTCTTAAAATTAAAAAACTGAATGTTCAAGGCTGCTTGGAGGAAGATTCACGAAAATGTTTGAAAAATCCTCTCAAATAGGCCTCGAAGTATAAAAACACTTTGCTGTCTGCCTCCTAACTAAGCACAATATGAAACCCTAAATTATGTTCACACGGCTACTCAAAGAGGCATTTCCACCATTACAATAAAAAAATTCACATATTAACCTATCAGACTACTCAAATTTGTCTAATCCGAACGCCTCGATTATGATCCAGCATTCAAAATCAATCCTAAGTACAGAAACCTTTAGTTAATTAATTATTAACACAATCGAGAAACCTAGGGGAAAATTCCAGCCAATTCGCAATAGCTTTTCATATGAAAAAGATTTACGAATAAATCAAAAGCGATGAAGCAAACAAATTGTTTAAGAACAGGAGATTAAGAGAACGAAATGAGAATGTAGGTCTAAACCAGGCCCCCAAATCAGAAAGAATCAGAGGGAGCAGACATGTTGACCTGTGAATTCGATCTCTGTGCACACTACCATGCTTCCTTCATTCCTTTATTCCAGAGCATCGGCTTATTGTACACAGACGGATTCCATAAAACCCTAAAATGAAAACTCTTATGCCCTACAAAGAAGCGAAGAACAAAACAACAAAGCAAAAGAAAGGAATTTAAAGAAAAAAAACACGATTGATAGATAAGAAAGAAGGGT

Coding sequence (CDS)

ATGCTTTATCAATATGCCCTTAAATCTTCACATCTTGCCTCTGTCAAAAGAATTCTTAAACATGTTCTTGGTACTTCTGATTATGGTATGTGGTATTCTTGTGACACCACTGCCACCCTTGTTGGTTTTTACTATATAGATTGGATTGATTGTTCTAAGGATAGAGAGAGCACTCTCGGTGAATGTTTCTTTCTTGTCAATAATCCTATTTCATGCTTCAGCAAAAGGCATAACTGTGTTTCTCTGTAA

Protein sequence

MLYQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGECFFLVNNPISCFSKRHNCVSL

Homology

[Close]

BLAST of Cmc11g0303831 vs. NCBI nr
Match: KAA0064116.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 7.0e-18
Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   ++SHL +VKRILK+V  TSD+G+ YS DTT+TLVG+   DW+  S DR+ST G C
Sbjct: 140 YQADPRTSHLEAVKRILKYVHETSDFGIMYSYDTTSTLVGYCDADWVGSSDDRKSTFGGC 199

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 200 FFLENNLISWFSKKQNCVSL 219

[Close]

BLAST of Cmc11g0303831 vs. NCBI nr
Match: PNX58605.1 (putative gag-pol polyprotein, partial [Trifolium pratense])

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ  LK SHLA VKRILKHV GT DYG+ Y+    + LVG+   DW  C+ DR+ST G C
Sbjct: 58  YQAELKMSHLAQVKRILKHVNGTCDYGILYTHGENSMLVGYCDADWAGCADDRKSTSGAC 117

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 118 FFLGNNLISWFSKKQNCVSL 137

[Close]

BLAST of Cmc11g0303831 vs. NCBI nr
Match: TYK03060.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 4.5e-17
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           +Q   ++SHL  VKRI+K+V GTSD+G+ YSCDT +  VG Y +DWI  S DR+ST   C
Sbjct: 338 FQSYPRTSHLEVVKRIIKYVHGTSDFGILYSCDTNSLFVGSYDVDWIGSSDDRKSTSRGC 397

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 398 FFLENNLISWFSKKQNCVSL 417

[Close]

BLAST of Cmc11g0303831 vs. NCBI nr
Match: KAA0062247.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 5.9e-17
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   + SHL   KRILK VLGT + GMWYS DTTA LVG+   DW  C +DR+ST   C
Sbjct: 356 YQVDPRKSHLRCAKRILKDVLGTINLGMWYSFDTTAVLVGYCNADWAGCVEDRKSTSSGC 415

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN I+ FSK+ NC+S+
Sbjct: 416 FFLGNNLIAWFSKKQNCISV 435

[Close]

BLAST of Cmc11g0303831 vs. NCBI nr
Match: TYK27289.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 5.9e-17
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   + SHL   KRILK VLGT + GMWYS DTTA LVG+   DW  C +DR+ST   C
Sbjct: 183 YQVDPRKSHLRCAKRILKDVLGTINLGMWYSFDTTAVLVGYCNADWAGCVEDRKSTSSGC 242

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN I+ FSK+ NC+S+
Sbjct: 243 FFLGNNLIAWFSKKQNCISV 262

[Close]

BLAST of Cmc11g0303831 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.1e-05
Identity = 25/73 (34.25%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 10  SHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGECFFLVNNP 69
           +H  ++KR+L+++  T  YG+ ++   TA LVG+   DW    + R ST G  F L    
Sbjct: 41  THWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGC 100

Query: 70  ISCFSKRHNCVSL 83
           +S  SK+   V+L
Sbjct: 101 VSWRSKKQRTVAL 113

[Close]

BLAST of Cmc11g0303831 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.1e-04
Identity = 24/78 (30.77%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 3    YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
            Y +     H  ++KR+L+++ GT D+G++     T +L  +   DW   + D  ST G  
Sbjct: 1255 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYI 1314

Query: 63   FFLVNNPISCFSKRHNCV 81
             +L ++PIS  SK+   V
Sbjct: 1315 VYLGHHPISWSSKKQKGV 1332

[Close]

BLAST of Cmc11g0303831 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.7e-04
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 11   HLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGECFFLVNNPI 70
            HL ++KRIL+++ GT ++G++     T +L  +   DW     D  ST G   +L ++PI
Sbjct: 1280 HLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPI 1339

Query: 71   SCFSKRHNCV 81
            S  SK+   V
Sbjct: 1340 SWSSKKQKGV 1349

[Close]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL
Match: A0A5A7VCL5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00290 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.4e-18
Identity = 49/80 (61.25%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   ++SHL +VKRILK+V  TSD+G+ YS DTT+TLVG+   DW+  S DR+ST G C
Sbjct: 140 YQADPRTSHLEAVKRILKYVHETSDFGIMYSYDTTSTLVGYCDADWVGSSDDRKSTFGGC 199

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 200 FFLENNLISWFSKKQNCVSL 219

[Close]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL
Match: A0A2K3JX22 (Putative gag-pol polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g059275 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.8e-18
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ  LK SHLA VKRILKHV GT DYG+ Y+    + LVG+   DW  C+ DR+ST G C
Sbjct: 58  YQAELKMSHLAQVKRILKHVNGTCDYGILYTHGENSMLVGYCDADWAGCADDRKSTSGAC 117

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 118 FFLGNNLISWFSKKQNCVSL 137

[Close]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL
Match: A0A5D3BVB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001600 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           +Q   ++SHL  VKRI+K+V GTSD+G+ YSCDT +  VG Y +DWI  S DR+ST   C
Sbjct: 338 FQSYPRTSHLEVVKRIIKYVHGTSDFGILYSCDTNSLFVGSYDVDWIGSSDDRKSTSRGC 397

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN IS FSK+ NCVSL
Sbjct: 398 FFLENNLISWFSKKQNCVSL 417

[Close]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL
Match: A0A5A7V5L5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00100 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-17
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   + SHL   KRILK VLGT + GMWYS DTTA LVG+   DW  C +DR+ST   C
Sbjct: 356 YQVDPRKSHLRCAKRILKDVLGTINLGMWYSFDTTAVLVGYCNADWAGCVEDRKSTSSGC 415

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN I+ FSK+ NC+S+
Sbjct: 416 FFLGNNLIAWFSKKQNCISV 435

[Close]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL
Match: A0A5D3DVA3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00610 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-17
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 3   YQYALKSSHLASVKRILKHVLGTSDYGMWYSCDTTATLVGFYYIDWIDCSKDRESTLGEC 62
           YQ   + SHL   KRILK VLGT + GMWYS DTTA LVG+   DW  C +DR+ST   C
Sbjct: 183 YQVDPRKSHLRCAKRILKDVLGTINLGMWYSFDTTAVLVGYCNADWAGCVEDRKSTSSGC 242

Query: 63  FFLVNNPISCFSKRHNCVSL 83
           FFL NN I+ FSK+ NC+S+
Sbjct: 243 FFLGNNLIAWFSKKQNCISV 262

The following BLAST results are available for this feature:

BLAST of Cmc11g0303831 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064116.1	7.0e-18	61.25	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
PNX58605.1	1.2e-17	61.25	putative gag-pol polyprotein, partial [Trifolium pratense]	[more]
TYK03060.1	4.5e-17	58.75	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0062247.1	5.9e-17	57.50	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK27289.1	5.9e-17	57.50	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0303831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CV72	7.1e-05	34.25	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	2.1e-04	30.77	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.7e-04	34.29	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCL5	3.4e-18	61.25	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A2K3JX22	5.8e-18	61.25	Putative gag-pol polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g...	[more]
A0A5D3BVB3	2.2e-17	58.75	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G0...	[more]
A0A5A7V5L5	2.9e-17	57.50	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DVA3	2.9e-17	57.50	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc11g0303831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303831.1	Cmc11g0303831.1	mRNA