Cmc11g0303701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 25191382 .. 25193450 (+)
RNA-Seq Expression	Cmc11g0303701
Synteny	Cmc11g0303701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAACCACTAACAAAAAAAGAAAAATGAAATGGAAAAGAATTTGGTATACAAAAATGTATATCTATTACTCACTCCACATTATTAGTAACCCAACAAAGATTGACATTCACAGAAAAAGCAAAGCAAAGCAAACACATAGAAACTTACTTGTTTGACATCGTGTTCATCATAAACTCCCTTTTCCCCCCCCCTTTTTTTTTTTTCTTTGATTAATGGAAAAAGAAAAGGGTAAGTGTTTCCTATTTTAAAATATAAAACTTGAATTCCAAATATAATCATGTCATACTTATTTGAAGCCAAAAACGAAATCCACAAAATTACACTCCCAAATACCTGTGATTCATAACTTTAGCCACATCACAAATTTCACCTAATATTTATTTAATGACATAATATATTTATAATCGCTATTATTAAATTCGTAACGTCGTTGTATATTAATAGATATTCCACGTCGTTAGTAAATTACGTCAACCAAGAAATAGTCCAAGTCCAGCTCCATCTCCCCCAAATCTTCTTCCCCGCAGCACTGCCTTCTCGCTGCCGGCAGACTTGCCGCCGCCATCTCCAATCCCAACTCATCCACCTCTCCACAATACACCATCTCCTCAATCGGAGTCAAAAAGCTGTCGTAATGGAGCACCGAAGTCGGCGACCAAGCCGCCGTCGTTTTACGCGATTCTACGCCGTCCTCCTCCTTGCTACCGCCGTCCACCGCCGTTTTTACTGCTCCGTCCCCCGAGAAGTTTGTTGCGGCGTTTGGACCCTGGAGTTCTATAGCAGCTCGGTCGTAAACCGCCGCTGCTTCTTCCGCCGTATCGAAGGTTCCGAGCCAAATCCGTTTCCGGAGAATCGGATCTCGAACTTCCGCCGCCCATCGGCCCCACGGTCTCTGCCGGACTCCTCTGAACTTATTCCGGCGAGATGAATTGTTAGACCTTCGTGATCTGGGGTTCCGCTTCTTGCAAATCCCCGAAACGGGGGACTTTGGTGAACTATCAGCAACAGAATGACGTTTTATAGTGATCTCTCTTACGTGTCTCCTAATGGTTGTTCTTGATCCCAAAATCAGTTCATCTTCACTAGAGGAATCAGTAGCGTCGGCGTCGGTGACGATGATCCTAAGAAGCCTTTGCTTCGGTTTTGTAGAGTCACCGGAAGTTAGAGCTTTCCGGCGGCAGTTGGTTTTATGCTCCGATAAAGAAGCCATGTCTCCGACAGACATGTTAGATCTGAAAGAATAATAACAAGCTTGAGGAAGATTTTTGGTTAAGATCACAAATTACAATTGGGGATGTGAAAAGAAAGAGTAACAAAGGAAGAAGAAGCTTAATCAATCTGTAAAATCCGCAAAACAACGAAGAAGAAGGATCAATCGCAAAAAAATCATCAAAGATAGCTTCTCACTAACAAATTGAAGAAGAAACATATGAAAGGATTAGCTACCAAGAAAACCCTTTTCAGTTCAGAAAACAGAGTGAGGAAGAAAAAGAAGAAGAAGCGAAAATGGGAAGACTTTGGAGAGAAAATGGGAAGGGAAGACTTGGGAGTGGAAAACCCAATTCTTCGAGTAAGAAGATTGAAGACAGATATATAGGAATTTAGTGTAAAGAATCACAAAATGTCCCACCCCGTGAAAATTGGCCACGTTGTTATAATTCTGATAGGTTTCTTCAATTCAAGTTTATAAGAGAGACAATTATCTTCGTGGAGACGAACAGATCAAAGTTGACAAAATAGTTGAATCTATGTACCTCTTAGCAACAATGCCACTTTGTTACTTATAATAATTAAGTTATTAGGCAGCCTCCTCAATATAGATTACATTATAAGACAAGATGTAACTCATTTATTAGCCATTGGTAGAAATCGTTTGAAATTACGTTACAAGACGTCCCTCGCAACTCAACTCTTTCACAAAGGCTTAGCCAATGATATATGTTGGATGAAACAATCTTACCATTGGTCAACAACGAGCAATAAACACATGCATTGTTTCAAACTCATATTTGACTTAGAGACAATTATAGTCTAGTGCACGGTAAGTTCACACTACCAACTTTTCA

mRNA sequence

TTGAAACCACTAACAAAAAAAGAAAAATGAAATGGAAAAGAATTTGGTATACAAAAATGTATATCTATTACTCACTCCACATTATTAGTAACCCAACAAAGATTGACATTCACAGAAAAAGCAAAGCAAAGCAAACACATAGAAACTTACTTGTTTGACATCGTGTTCATCATAAACTCCCTTTTCCCCCCCCCTTTTTTTTTTTTCTTTGATTAATGGAAAAAGAAAAGGGTAAGTGTTTCCTATTTTAAAATATAAAACTTGAATTCCAAATATAATCATGTCATACTTATTTGAAGCCAAAAACGAAATCCACAAAATTACACTCCCAAATACCTGTGATTCATAACTTTAGCCACATCACAAATTTCACCTAATATTTATTTAATGACATAATATATTTATAATCGCTATTATTAAATTCGTAACGTCGTTGTATATTAATAGATATTCCACGTCGTTAGTAAATTACGTCAACCAAGAAATAGTCCAAGTCCAGCTCCATCTCCCCCAAATCTTCTTCCCCGCAGCACTGCCTTCTCGCTGCCGGCAGACTTGCCGCCGCCATCTCCAATCCCAACTCATCCACCTCTCCACAATACACCATCTCCTCAATCGGAGTCAAAAAGCTGTCGTAATGGAGCACCGAAGTCGGCGACCAAGCCGCCGTCGTTTTACGCGATTCTACGCCGTCCTCCTCCTTGCTACCGCCGTCCACCGCCGTTTTTACTGCTCCGTCCCCCGAGAAGTTTGTTGCGGCGTTTGGACCCTGGAGTTCTATAGCAGCTCGGTCGTAAACCGCCGCTGCTTCTTCCGCCGTATCGAAGGTTCCGAGCCAAATCCGTTTCCGGAGAATCGGATCTCGAACTTCCGCCGCCCATCGGCCCCACGGTCTCTGCCGGACTCCTCTGAACTTATTCCGGCGAGATGAATTGTTAGACCTTCGTGATCTGGGGTTCCGCTTCTTGCAAATCCCCGAAACGGGGGACTTTGGTGAACTATCAGCAACAGAATGACGTTTTATAGTGATCTCTCTTACGTGTCTCCTAATGGTTGTTCTTGATCCCAAAATCAGTTCATCTTCACTAGAGGAATCAGTAGCGTCGGCGTCGGTGACGATGATCCTAAGAAGCCTTTGCTTCGGTTTTGTAGAGTCACCGGAAGTTAGAGCTTTCCGGCGGCAGTTGGTTTTATGCTCCGATAAAGAAGCCATGTCTCCGACAGACATGTTAGATCTGAAAGAATAATAACAAGCTTGAGGAAGATTTTTGGTTAAGATCACAAATTACAATTGGGGATGTGAAAAGAAAGAGTAACAAAGGAAGAAGAAGCTTAATCAATCTGTAAAATCCGCAAAACAACGAAGAAGAAGGATCAATCGCAAAAAAATCATCAAAGATAGCTTCTCACTAACAAATTGAAGAAGAAACATATGAAAGGATTAGCTACCAAGAAAACCCTTTTCAGTTCAGAAAACAGAGTGAGGAAGAAAAAGAAGAAGAAGCGAAAATGGGAAGACTTTGGAGAGAAAATGGGAAGGGAAGACTTGGGAGTGGAAAACCCAATTCTTCGAGTAAGAAGATTGAAGACAGATATATAGGAATTTAGTGTAAAGAATCACAAAATGTCCCACCCCGTGAAAATTGGCCACGTTGTTATAATTCTGATAGGTTTCTTCAATTCAAGTTTATAAGAGAGACAATTATCTTCGTGGAGACGAACAGATCAAAGTTGACAAAATAGTTGAATCTATGTACCTCTTAGCAACAATGCCACTTTGTTACTTATAATAATTAAGTTATTAGGCAGCCTCCTCAATATAGATTACATTATAAGACAAGATGTAACTCATTTATTAGCCATTGGTAGAAATCGTTTGAAATTACGTTACAAGACGTCCCTCGCAACTCAACTCTTTCACAAAGGCTTAGCCAATGATATATGTTGGATGAAACAATCTTACCATTGGTCAACAACGAGCAATAAACACATGCATTGTTTCAAACTCATATTTGACTTAGAGACAATTATAGTCTAGTGCACGGTAAGTTCACACTACCAACTTTTCA

Coding sequence (CDS)

ATGGAGCACCGAAGTCGGCGACCAAGCCGCCGTCGTTTTACGCGATTCTACGCCGTCCTCCTCCTTGCTACCGCCGTCCACCGCCGTTTTTACTGCTCCGTCCCCCGAGAAGTTTGTTGCGGCGTTTGGACCCTGGAGTTCTATAGCAGCTCGGTCGTAAACCGCCGCTGCTTCTTCCGCCGTATCGAAGGTTCCGAGCCAAATCCGTTTCCGGAGAATCGGATCTCGAACTTCCGCCGCCCATCGGCCCCACGGTCTCTGCCGGACTCCTCTGAACTTATTCCGGCGAGATGA

Protein sequence

MEHRSRRPSRRRFTRFYAVLLLATAVHRRFYCSVPREVCCGVWTLEFYSSSVVNRRCFFRRIEGSEPNPFPENRISNFRRPSAPRSLPDSSELIPAR

Homology

[Close]

BLAST of Cmc11g0303701 vs. NCBI nr
Match: TQD80631.1 (hypothetical protein C1H46_033810 [Malus baccata])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-05
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 46  EFYSSSVVNRRCFFRRIEGSEPNPFPENRISNFRRPSAPRSLPDSSELIPA 97
           E   SSVV RR F RR+EGSEP PF    +SN R P AP SLPD+ E +PA
Sbjct: 85  EHQRSSVVRRRSFLRRVEGSEPKPFSLIWVSNLRSPLAPWSLPDADEPLPA 135

[Close]

BLAST of Cmc11g0303701 vs. ExPASy TrEMBL
Match: A0A540L2C3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033810 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-05
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 46  EFYSSSVVNRRCFFRRIEGSEPNPFPENRISNFRRPSAPRSLPDSSELIPA 97
           E   SSVV RR F RR+EGSEP PF    +SN R P AP SLPD+ E +PA
Sbjct: 85  EHQRSSVVRRRSFLRRVEGSEPKPFSLIWVSNLRSPLAPWSLPDADEPLPA 135

The following BLAST results are available for this feature:

BLAST of Cmc11g0303701 vs. NCBI nr


Match Name	E-value	Identity	Description
TQD80631.1	4.7e-05	58.82	hypothetical protein C1H46_033810 [Malus baccata]	[more]

BLAST of Cmc11g0303701 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0303701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A540L2C3	2.3e-05	58.82	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033810 PE=4 SV=1	[more]

BLAST of Cmc11g0303701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303701.1	Cmc11g0303701.1	mRNA