Cmc11g0303671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 25179579 .. 25180487 (-)
RNA-Seq Expression	Cmc11g0303671
Synteny	Cmc11g0303671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGCTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCACCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATTAAATCCTACGGTTTTAACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAATACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGCGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACATATATCGACAAAATGTTGGTTCGATATTCGATGCGGAACTTTAAGAAGGGTTTATTACCTTTTAGGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCATCTGTGGGCAGCTTAATGTATGTTATTCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATTAG

mRNA sequence

ATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGCTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCACCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATTAAATCCTACGGTTTTAACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAATACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGCGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACATATATCGACAAAATGTTGGTTCGATATTCGATGCGGAACTTTAAGAAGGGTTTATTACCTTTTAGGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCATCTGTGGGCAGCTTAATGTATGTTATTCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATTAG

Coding sequence (CDS)

ATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGCTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCACCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAATTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATTAAATCCTACGGTTTTAACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAATACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGCGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACATATATCGACAAAATGTTGGTTCGATATTCGATGCGGAACTTTAAGAAGGGTTTATTACCTTTTAGGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCATCTGTGGGCAGCTTAATGTATGTTATTCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATTAG

Protein sequence

MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY

Homology

[Close]

BLAST of Cmc11g0303671 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 590.5 bits (1521), Expect = 8.2e-165
Identity = 287/302 (95.03%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1    MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
            MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 739  MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 798

Query: 61   PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
            PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 799  PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 858

Query: 121  NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
            NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 859  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 918

Query: 181  DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
            DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 919  DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 978

Query: 241  FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
             KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 979  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 1038

Query: 301  RY 303
            RY
Sbjct: 1039 RY 1040

[Close]

BLAST of Cmc11g0303671 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 590.5 bits (1521), Expect = 8.2e-165
Identity = 287/302 (95.03%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 613 MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 672

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
           PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 673 PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 732

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 733 NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 792

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 793 DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 852

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 853 SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 912

Query: 301 RY 303
           RY
Sbjct: 913 RY 914

[Close]

BLAST of Cmc11g0303671 vs. NCBI nr
Match: KAA0059556.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK29968.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 2.9e-162
Identity = 283/302 (93.71%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MY NSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 81  MYSNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 140

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
            VAMLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 141 HVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKL 200

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIK YGF+QNVDEPCVYKKINKGKVAFL+LY+DDILLIGN
Sbjct: 201 NRSIYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIGN 260

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKD+G AQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSM+N
Sbjct: 261 DVGYLTDVKAWLAAQFQMKDVGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQN 320

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQCPKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 321 SKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 380

Query: 301 RY 303
           RY
Sbjct: 381 RY 382

[Close]

BLAST of Cmc11g0303671 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 580.9 bits (1496), Expect = 6.5e-162
Identity = 282/302 (93.38%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1    MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
            MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EG DYEETFS
Sbjct: 739  MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFS 798

Query: 61   PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
             VAMLKSIRILLSI  FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 799  SVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 858

Query: 121  NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
            NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 859  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 918

Query: 181  DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
            DVGYLTD+KAWLAAQFQMKDLG  QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 919  DVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 978

Query: 241  FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
             KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 979  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 1038

Query: 301  RY 303
            RY
Sbjct: 1039 RY 1040

[Close]

BLAST of Cmc11g0303671 vs. NCBI nr
Match: KAA0033121.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 579.3 bits (1492), Expect = 1.9e-161
Identity = 282/302 (93.38%), Postives = 290/302 (96.03%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MYFN +WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 349 MYFNLMWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 408

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
           PVAMLKSIRILLSI TFYDYEIW+MDV TAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 409 PVAMLKSIRILLSIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 468

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIKSYGF QNVDEPCVYKKINKGKV FL+LYVDDILLIGN
Sbjct: 469 NRSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGN 528

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSM+N
Sbjct: 529 DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQN 588

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQCPKTPQEVEDMRRIPYAS+VGSLMYVI CTR +ICYAV IVS
Sbjct: 589 SKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVS 648

Query: 301 RY 303
           RY
Sbjct: 649 RY 650

[Close]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84
Identity = 144/300 (48.00%), Postives = 216/300 (72.00%), Query Frame = 0


Query: 4    NSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPVA 63
            N  ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G D++E FSPV 
Sbjct: 840  NGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVV 899

Query: 64   MLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNRS 123
             + SIR +LS+    D E+ Q+DVKTAFL+G+LEE I+M QPEGF   G++  +CKLN+S
Sbjct: 900  KMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKS 959

Query: 124  IYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVY-KKINKGKVAFLILYVDDILLIGNDV 183
            +YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++G D 
Sbjct: 960  LYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDK 1019

Query: 184  GYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFK 243
            G +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N K
Sbjct: 1020 GLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAK 1079

Query: 244  KGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY 303
                P    + LSK+ CP T +E  +M ++PY+S+VGSLMY ++CTRPDI +AVG+VSR+
Sbjct: 1080 PVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRF 1139

[Close]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 212.6 bits (540), Expect = 6.1e-54
Identity = 114/305 (37.38%), Postives = 177/305 (58.03%), Query Frame = 0


Query: 4    NSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPVA 63
            N+ W +   PE    +  +W++  K +  G    +KARLVA+G+TQ+   DYEETF+PVA
Sbjct: 920  NNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVA 979

Query: 64   MLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNRS 123
             + S R +LS+   Y+ ++ QMDVKTAFLNG L+E I+M  P+G         +CKLN++
Sbjct: 980  RISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKA 1039

Query: 124  IYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVY--KKINKGKVAFLILYVDDILLIGND 183
            IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N  +  +++LYVDD+++   D
Sbjct: 1040 IYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGD 1099

Query: 184  VGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNF 243
            +  + + K +L  +F+M DL   ++ +GI+I  + +   + LSQ+ Y+ K+L +++M N 
Sbjct: 1100 MTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENC 1159

Query: 244  KKGLLP----FRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVG 303
                 P      +E+  S E C             P  S +G LMY++LCTRPD+  AV 
Sbjct: 1160 NAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVN 1209

[Close]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 114/300 (38.00%), Postives = 164/300 (54.67%), Query Frame = 0


Query: 4    NSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPV 63
            N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR G DY ETFSPV
Sbjct: 965  NHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1024

Query: 64   AMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNR 123
                SIRI+L +     + I Q+DV  AFL G L + ++MSQP GF+ + +   +C+L +
Sbjct: 1025 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRK 1084

Query: 124  SIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGNDV 183
            +IYGLKQA R+W +   T + + GF  ++ +  ++       + ++++YVDDIL+ GND 
Sbjct: 1085 AIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDT 1144

Query: 184  GYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFK 243
              L      L+ +F +K+     Y LGI+    R  + L LSQ  Y   +L R +M   K
Sbjct: 1145 VLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAK 1204

Query: 244  KGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY 303
                P      L+     K P   E      Y   VGSL Y+   TRPD+ YAV  +S+Y
Sbjct: 1205 PVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQYLAF-TRPDLSYAVNRLSQY 1255

[Close]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.1e-50
Identity = 117/300 (39.00%), Postives = 163/300 (54.33%), Query Frame = 0


Query: 4    NSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPV 63
            N  W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY QR G DY ETFSPV
Sbjct: 982  NHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1041

Query: 64   AMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNR 123
                SIRI+L +     + I Q+DV  AFL G L + ++MSQP GFI + +   +CKL +
Sbjct: 1042 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRK 1101

Query: 124  SIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGNDV 183
            ++YGLKQA R+W +     + + GF  +V +  ++       + ++++YVDDIL+ GND 
Sbjct: 1102 ALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDP 1161

Query: 184  GYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFK 243
              L +    L+ +F +KD     Y LGI+    R    L LSQ  YI  +L R +M   K
Sbjct: 1162 TLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAK 1221

Query: 244  KGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY 303
                P      LS     K     E      Y   VGSL Y+   TRPDI YAV  +S++
Sbjct: 1222 PVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQYLAF-TRPDISYAVNRLSQF 1272

[Close]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 70/218 (32.11%), Postives = 104/218 (47.71%), Query Frame = 0


Query: 85  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 144
           MDV TAFLN  ++E I++ QP GF+ +     + +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 145 YGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGAA 204
            GF ++  E  +Y +       ++ +YVDD+L+          +K  L   + MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 205 QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFKKGLLPFRHEVHLSKEQCPKTPQ 264
              LG+  I    N  + LS   YI K      +  FK    P  +    SK     T  
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCN----SKPLFETTSP 180

Query: 265 EVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY 303
            ++D+   PY S VG L++     RPDI Y V ++SR+
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRF 211

[Close]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.0e-165
Identity = 287/302 (95.03%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1    MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
            MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 739  MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 798

Query: 61   PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
            PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 799  PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 858

Query: 121  NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
            NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 859  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 918

Query: 181  DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
            DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 919  DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 978

Query: 241  FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
             KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 979  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 1038

Query: 301  RY 303
            RY
Sbjct: 1039 RY 1040

[Close]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.0e-165
Identity = 287/302 (95.03%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 613 MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 672

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
           PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 673 PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 732

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 733 NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 792

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 793 DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 852

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 853 SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 912

Query: 301 RY 303
           RY
Sbjct: 913 RY 914

[Close]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL
Match: A0A5A7UZF3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G00020 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.4e-162
Identity = 283/302 (93.71%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MY NSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 81  MYSNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 140

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
            VAMLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 141 HVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKL 200

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIK YGF+QNVDEPCVYKKINKGKVAFL+LY+DDILLIGN
Sbjct: 201 NRSIYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIGN 260

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKD+G AQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSM+N
Sbjct: 261 DVGYLTDVKAWLAAQFQMKDVGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQN 320

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQCPKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 321 SKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 380

Query: 301 RY 303
           RY
Sbjct: 381 RY 382

[Close]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.1e-162
Identity = 282/302 (93.38%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1    MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
            MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EG DYEETFS
Sbjct: 739  MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFS 798

Query: 61   PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
             VAMLKSIRILLSI  FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 799  SVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 858

Query: 121  NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
            NRSIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKGKVAFL+LYVDDILLIGN
Sbjct: 859  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGN 918

Query: 181  DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
            DVGYLTD+KAWLAAQFQMKDLG  QYVLGIQIIRDRKNKTLALSQATYIDK+LVRYSM+N
Sbjct: 919  DVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQN 978

Query: 241  FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
             KKGLLPFRH VHLSKEQ PKTPQEVEDMRRIPYAS+VGSLMY +LCTRPDICYAVGIVS
Sbjct: 979  SKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVS 1038

Query: 301  RY 303
            RY
Sbjct: 1039 RY 1040

[Close]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL
Match: A0A5D3CZY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00460 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.2e-162
Identity = 282/302 (93.38%), Postives = 290/302 (96.03%), Query Frame = 0


Query: 1   MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFS 60
           MYFN +WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREG DYEETFS
Sbjct: 349 MYFNLMWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 408

Query: 61  PVAMLKSIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKICKL 120
           PVAMLKSIRILLSI TFYDYEIW+MDV TAFLNGNLEESIFMSQPEGFITQGQEQK+CKL
Sbjct: 409 PVAMLKSIRILLSIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 468

Query: 121 NRSIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGN 180
           NRSIYGLKQASRSWNIRFDTAIKSYGF QNVDEPCVYKKINKGKV FL+LYVDDILLIGN
Sbjct: 469 NRSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGN 528

Query: 181 DVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRN 240
           DVGYLTD+KAWLAAQFQMKDLG AQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSM+N
Sbjct: 529 DVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQN 588

Query: 241 FKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVS 300
            KKGLLPFRH VHLSKEQCPKTPQEVEDMRRIPYAS+VGSLMYVI CTR +ICYAV IVS
Sbjct: 589 SKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVS 648

Query: 301 RY 303
           RY
Sbjct: 649 RY 650

[Close]

BLAST of Cmc11g0303671 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 205.7 bits (522), Expect = 5.3e-53
Identity = 112/300 (37.33%), Postives = 176/300 (58.67%), Query Frame = 0


Query: 7   WELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPVAMLK 66
           WE+  LP   KPIGCKW+YK K +S G ++ +KARLVAKGYTQ+EG D+ ETFSPV  L 
Sbjct: 115 WEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLT 174

Query: 67  SIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT-QGQE---QKICKLNR 126
           S++++L+I+  Y++ + Q+D+  AFLNG+L+E I+M  P G+   QG       +C L +
Sbjct: 175 SVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKK 234

Query: 127 SIYGLKQASRSWNIRFDTAIKSYGFNQNVDEPCVYKKINKGKVAFLILYVDDILLIGNDV 186
           SIYGLKQASR W ++F   +  +GF Q+  +   + KI       +++YVDDI++  N+ 
Sbjct: 235 SIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNND 294

Query: 187 GYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMRNFK 246
             + ++K+ L + F+++DLG  +Y LG++I R      + + Q  Y   +L    +   K
Sbjct: 295 AAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCK 354

Query: 247 KGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVILCTRPDICYAVGIVSRY 303
              +P    V  S      +  +  D +   Y   +G LMY+ + TR DI +AV  +S++
Sbjct: 355 PSSVPMDPSVTFSAH----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQF 405

[Close]

BLAST of Cmc11g0303671 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 4   NSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGADYEETFSPVA 63
           N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG  + ET+SPV 
Sbjct: 54  NKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVV 113

Query: 64  MLKSIRILLSI 75
              +IR +L++
Sbjct: 114 RTATIRTILNV 124

[Close]

BLAST of Cmc11g0303671 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-11
Identity = 52/133 (39.10%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 167 FLILYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGAAQYVLGIQIIRDRKNKTLALSQA 226
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 227 TYIDKMLVRYSMRNFKKGLLPFRHEVHLSKEQCPKTPQEVEDMRRIPYASSVGSLMYVIL 286
            Y +++L    M + K    P   +++ S     K P   +      + S VG+L Y+ L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSD------FRSIVGALQYLTL 121

Query: 287 CTRPDICYAVGIV 300
            TRPDI YAV IV
Sbjct: 122 -TRPDISYAVNIV 124

The following BLAST results are available for this feature:

BLAST of Cmc11g0303671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	8.2e-165	95.03	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	8.2e-165	95.03	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059556.1	2.9e-162	93.71	gag/pol protein [Cucumis melo var. makuwa] >TYK29968.1 gag/pol protein [Cucumis ...	[more]
KAA0035907.1	6.5e-162	93.38	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033121.1	1.9e-161	93.38	gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc11g0303671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-84	48.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.1e-54	37.38	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.4e-50	38.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.1e-50	39.00	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	1.9e-23	32.11	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0303671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	4.0e-165	95.03	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	4.0e-165	95.03	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7UZF3	1.4e-162	93.71	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G000...	[more]
A0A5A7T2V9	3.1e-162	93.38	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3CZY3	9.2e-162	93.38	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G004...	[more]

BLAST of Cmc11g0303671 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.3e-53	37.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	2.7e-12	45.07	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	5.0e-11	39.10	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 4..243 e-value: 1.4E-74 score: 250.8
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..301
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303671.1	Cmc11g0303671.1	mRNA